RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 FAM98CQ17RN3 349 aaKnown RBP30.81■■■□□ 2.52
FDFT1-220ENST00000531733 NGDNQ8NEJ9 315 aaKnown RBP30.8■■■□□ 2.52
FDFT1-220ENST00000531733 ATP7BP35670 1465 aa30.8■■■□□ 2.52
FDFT1-220ENST00000531733 PAK3O75914 559 aaPredicted RBP30.78■■■□□ 2.52
FDFT1-220ENST00000531733 A0A0G2JS52 829 aa30.77■■■□□ 2.52
FDFT1-220ENST00000531733 MYT1Q01538 1121 aa30.77■■■□□ 2.52
FDFT1-220ENST00000531733 STAC3Q96MF2 364 aa30.76■■■□□ 2.51
FDFT1-220ENST00000531733 SF3B2Q13435 895 aaKnown RBP30.75■■■□□ 2.51
FDFT1-220ENST00000531733 NUDT16Q96DE0 195 aaKnown RBP30.75■■■□□ 2.51
FDFT1-220ENST00000531733 HRCP23327 699 aa30.74■■■□□ 2.51
FDFT1-220ENST00000531733 ITSN1Q15811 1721 aa30.73■■■□□ 2.51
FDFT1-220ENST00000531733 FAM182BQ5T319 152 aa30.73■■■□□ 2.51
FDFT1-220ENST00000531733 SPATA31A5Q5VU36 1347 aa30.73■■■□□ 2.51
FDFT1-220ENST00000531733 SPATA31A7Q8IWB4 1347 aa30.73■■■□□ 2.51
FDFT1-220ENST00000531733 CDK19Q9BWU1 502 aa30.7■■■□□ 2.51
FDFT1-220ENST00000531733 PRDM11Q9NQV5 511 aa30.69■■■□□ 2.5
FDFT1-220ENST00000531733 PHRF1Q9P1Y6 1649 aaKnown RBP30.69■■■□□ 2.5
FDFT1-220ENST00000531733 TOPAZ1Q8N9V7 1692 aa30.68■■■□□ 2.5
FDFT1-220ENST00000531733 THSD7AQ9UPZ6 1657 aa30.68■■■□□ 2.5
FDFT1-220ENST00000531733 KIAA0232Q92628 1395 aa30.68■■■□□ 2.5
FDFT1-220ENST00000531733 CHRNA2Q15822 529 aa30.68■■■□□ 2.5
FDFT1-220ENST00000531733 NUTM2GQ5VZR2 741 aa30.68■■■□□ 2.5
FDFT1-220ENST00000531733 NBPF1Q3BBV0 1214 aa30.65■■■□□ 2.5
FDFT1-220ENST00000531733 POLR3AO14802 1390 aaPredicted RBP30.64■■■□□ 2.5
FDFT1-220ENST00000531733 ZC3H6P61129 1189 aaKnown RBP30.63■■■□□ 2.49
FDFT1-220ENST00000531733 ACEP12821 1306 aa30.63■■■□□ 2.49
FDFT1-220ENST00000531733 KIAA1210Q9ULL0 1709 aa30.62■■■□□ 2.49
FDFT1-220ENST00000531733 PSDA5PKW4 1024 aaPredicted RBP30.62■■■□□ 2.49
FDFT1-220ENST00000531733 BAG6P46379 1132 aa30.62■■■□□ 2.49
FDFT1-220ENST00000531733 EN1Q05925 392 aaPredicted RBP30.61■■■□□ 2.49
FDFT1-220ENST00000531733 NBPF8Q3BBV2 869 aa30.61■■■□□ 2.49
FDFT1-220ENST00000531733 SPATA31A1Q5TZJ5 1347 aa30.61■■■□□ 2.49
FDFT1-220ENST00000531733 RGPD1P0DJD0 1748 aa30.6■■■□□ 2.49
FDFT1-220ENST00000531733 STRN4Q9NRL3 753 aa30.6■■■□□ 2.49
FDFT1-220ENST00000531733 CCDC61Q9Y6R9 512 aa30.59■■■□□ 2.49
FDFT1-220ENST00000531733 PLEKHG3A1L390 1219 aa30.58■■■□□ 2.49
FDFT1-220ENST00000531733 TNS1Q9HBL0 1735 aaKnown RBP30.58■■■□□ 2.49
FDFT1-220ENST00000531733 NRKQ7Z2Y5 1582 aa30.57■■■□□ 2.48
FDFT1-220ENST00000531733 LRP5O75197 1615 aa30.56■■■□□ 2.48
FDFT1-220ENST00000531733 USP35Q9P2H5 1018 aa30.53■■■□□ 2.48
FDFT1-220ENST00000531733 CAMTA1Q9Y6Y1 1673 aa30.52■■■□□ 2.48
FDFT1-220ENST00000531733 SSH2Q76I76 1423 aa30.51■■■□□ 2.47
FDFT1-220ENST00000531733 ABTB2Q8N961 1025 aa30.51■■■□□ 2.47
FDFT1-220ENST00000531733 DISP2A7MBM2 1401 aa30.5■■■□□ 2.47
FDFT1-220ENST00000531733 CABP2Q9NPB3 220 aa30.5■■■□□ 2.47
FDFT1-220ENST00000531733 USP19O94966 1318 aa30.49■■■□□ 2.47
FDFT1-220ENST00000531733 LMO7Q8WWI1 1683 aa30.49■■■□□ 2.47
FDFT1-220ENST00000531733 PPIP5K1Q6PFW1 1433 aa30.49■■■□□ 2.47
FDFT1-220ENST00000531733 EZH2Q15910 746 aaKnown RBP30.49■■■□□ 2.47
FDFT1-220ENST00000531733 LARP1Q6PKG0 1096 aaKnown RBP30.48■■■□□ 2.47
FDFT1-220ENST00000531733 TRIM37O94972 964 aa30.47■■■□□ 2.47
FDFT1-220ENST00000531733 SRPK2P78362 688 aaKnown RBP30.47■■■□□ 2.47
FDFT1-220ENST00000531733 CENPJQ9HC77 1338 aaPredicted RBP30.47■■■□□ 2.47
FDFT1-220ENST00000531733 CPDO75976 1380 aa30.45■■■□□ 2.47
FDFT1-220ENST00000531733 EVA1CP58658 441 aa30.45■■■□□ 2.47
FDFT1-220ENST00000531733 R3HDM1Q15032 1099 aaKnown RBP30.45■■■□□ 2.47
FDFT1-220ENST00000531733 QRICH2Q9H0J4 1663 aa30.45■■■□□ 2.46
FDFT1-220ENST00000531733 BARGINQ6ZT62 677 aa30.44■■■□□ 2.46
FDFT1-220ENST00000531733 FAM196AQ6ZSG2 479 aa30.43■■■□□ 2.46
FDFT1-220ENST00000531733 CAMKK2Q96RR4 588 aa30.43■■■□□ 2.46
FDFT1-220ENST00000531733 GCP02774 474 aa30.42■■■□□ 2.46
FDFT1-220ENST00000531733 NLRP13Q86W25 1043 aa30.39■■■□□ 2.46
FDFT1-220ENST00000531733 CABP1Q9NZU7 370 aa30.39■■■□□ 2.46
FDFT1-220ENST00000531733 TCP11L2Q8N4U5 519 aa30.38■■■□□ 2.45
FDFT1-220ENST00000531733 L3MBTL2Q969R5 705 aa30.38■■■□□ 2.45
FDFT1-220ENST00000531733 COL5A2P05997 1499 aaPredicted RBP30.38■■■□□ 2.45
FDFT1-220ENST00000531733 APBA3O96018 575 aa30.37■■■□□ 2.45
FDFT1-220ENST00000531733 PDE3BQ13370 1112 aa30.36■■■□□ 2.45
FDFT1-220ENST00000531733 USP6P35125 1406 aa30.36■■■□□ 2.45
FDFT1-220ENST00000531733 ZBTB7CA1YPR0 619 aa30.33■■■□□ 2.45
FDFT1-220ENST00000531733 SIN3AQ96ST3 1273 aa30.33■■■□□ 2.45
FDFT1-220ENST00000531733 RREB1Q92766 1687 aa30.33■■■□□ 2.45
FDFT1-220ENST00000531733 SLIT3O75094 1523 aa30.32■■■□□ 2.44
FDFT1-220ENST00000531733 PARP4Q9UKK3 1724 aaKnown RBP30.31■■■□□ 2.44
FDFT1-220ENST00000531733 PIK3C2AO00443 1686 aa30.31■■■□□ 2.44
FDFT1-220ENST00000531733 NLRP6P59044 892 aa30.31■■■□□ 2.44
FDFT1-220ENST00000531733 TRPM1Q7Z4N2 1603 aa30.31■■■□□ 2.44
FDFT1-220ENST00000531733 BRD4O60885 1362 aaPredicted RBP30.3■■■□□ 2.44
FDFT1-220ENST00000531733 NUP188Q5SRE5 1749 aa30.3■■■□□ 2.44
FDFT1-220ENST00000531733 THRAP3Q9Y2W1 955 aaKnown RBP30.29■■■□□ 2.44
FDFT1-220ENST00000531733 CRB1P82279 1406 aa30.28■■■□□ 2.44
FDFT1-220ENST00000531733 COL18A1P39060 1754 aa30.28■■■□□ 2.44
FDFT1-220ENST00000531733 PARD3Q8TEW0 1356 aa30.28■■■□□ 2.44
FDFT1-220ENST00000531733 AATKQ6ZMQ8 1374 aa30.27■■■□□ 2.44
FDFT1-220ENST00000531733 AXIN2Q9Y2T1 843 aa30.25■■■□□ 2.43
FDFT1-220ENST00000531733 PEAK1Q9H792 1746 aa30.25■■■□□ 2.43
FDFT1-220ENST00000531733 EVC2Q86UK5 1308 aa30.23■■■□□ 2.43
FDFT1-220ENST00000531733 LRRC37A3O60309 1634 aa30.23■■■□□ 2.43
FDFT1-220ENST00000531733 NEUROD1Q13562 356 aa30.2■■■□□ 2.43
FDFT1-220ENST00000531733 AKAP12Q02952 1782 aa30.2■■■□□ 2.42
FDFT1-220ENST00000531733 ROCK2O75116 1388 aaKnown RBP30.19■■■□□ 2.42
FDFT1-220ENST00000531733 TTC21BQ7Z4L5 1316 aa30.19■■■□□ 2.42
FDFT1-220ENST00000531733 TOM1L2Q6ZVM7 507 aa30.18■■■□□ 2.42
FDFT1-220ENST00000531733 PTF1AQ7RTS3 328 aa30.18■■■□□ 2.42
FDFT1-220ENST00000531733 CPSF1Q10570 1443 aaKnown RBP30.18■■■□□ 2.42
FDFT1-220ENST00000531733 RGPD5Q99666 1765 aa30.18■■■□□ 2.42
FDFT1-220ENST00000531733 SBF2Q86WG5 1849 aa30.17■■■□□ 2.42
FDFT1-220ENST00000531733 OVOS2A0A0G2JMS6 1433 aa30.17■■■□□ 2.42
FDFT1-220ENST00000531733 OVOS2A0A0J9YW53 1432 aa30.17■■■□□ 2.42
FDFT1-220ENST00000531733 OVOS2Q6IE36 1432 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms