RNA–Protein interactions for RNA: ENST00000531687.1

THUMPD2-209, Transcript of THUMP domain containing 2, humanhuman

TSL 3

Gene THUMPD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-209ENST00000531687 ACEP12821 1306 aa23.91■■□□□ 1.42
THUMPD2-209ENST00000531687 RXRBP28702 533 aa23.91■■□□□ 1.42
THUMPD2-209ENST00000531687 CABP2Q9NPB3 220 aa23.91■■□□□ 1.42
THUMPD2-209ENST00000531687 USP21Q9UK80 565 aa23.91■■□□□ 1.42
THUMPD2-209ENST00000531687 TIMELESSQ9UNS1 1208 aa23.91■■□□□ 1.42
THUMPD2-209ENST00000531687 BCL9LQ86UU0 1499 aa23.91■■□□□ 1.42
THUMPD2-209ENST00000531687 ATRNO75882 1429 aa23.91■■□□□ 1.42
THUMPD2-209ENST00000531687 HAP1P54257 671 aaPredicted RBP23.9■■□□□ 1.42
THUMPD2-209ENST00000531687 CABLES1Q8TDN4 633 aa23.88■■□□□ 1.41
THUMPD2-209ENST00000531687 QTRT2Q9H974 415 aaKnown RBP23.88■■□□□ 1.41
THUMPD2-209ENST00000531687 BRD4O60885 1362 aaPredicted RBP23.88■■□□□ 1.41
THUMPD2-209ENST00000531687 AKAP12Q02952 1782 aa23.88■■□□□ 1.41
THUMPD2-209ENST00000531687 RGS12O14924 1447 aa23.87■■□□□ 1.41
THUMPD2-209ENST00000531687 RBM6P78332 1123 aaKnown RBP23.87■■□□□ 1.41
THUMPD2-209ENST00000531687 TRPC5Q9UL62 973 aaPredicted RBP23.87■■□□□ 1.41
THUMPD2-209ENST00000531687 COL14A1Q05707 1796 aaKnown RBP23.87■■□□□ 1.41
THUMPD2-209ENST00000531687 PAK3O75914 559 aaPredicted RBP23.86■■□□□ 1.41
THUMPD2-209ENST00000531687 NRAPQ86VF7 1730 aa23.86■■□□□ 1.41
THUMPD2-209ENST00000531687 ATAD2Q6PL18 1390 aa23.86■■□□□ 1.41
THUMPD2-209ENST00000531687 USP6P35125 1406 aa23.84■■□□□ 1.41
THUMPD2-209ENST00000531687 NRKQ7Z2Y5 1582 aa23.84■■□□□ 1.41
THUMPD2-209ENST00000531687 MON2Q7Z3U7 1717 aa23.81■■□□□ 1.4
THUMPD2-209ENST00000531687 GLI3P10071 1580 aa23.81■■□□□ 1.4
THUMPD2-209ENST00000531687 PLEKHG5O94827 1062 aa23.8■■□□□ 1.4
THUMPD2-209ENST00000531687 UNC5CLQ8IV45 518 aa23.8■■□□□ 1.4
THUMPD2-209ENST00000531687 CABP1Q9NZU7 370 aa23.8■■□□□ 1.4
THUMPD2-209ENST00000531687 PIK3C2AO00443 1686 aa23.79■■□□□ 1.4
THUMPD2-209ENST00000531687 SSH2Q76I76 1423 aa23.79■■□□□ 1.4
THUMPD2-209ENST00000531687 CPSF1Q10570 1443 aaKnown RBP23.77■■□□□ 1.4
THUMPD2-209ENST00000531687 USP19O94966 1318 aa23.77■■□□□ 1.4
THUMPD2-209ENST00000531687 ABTB2Q8N961 1025 aa23.75■■□□□ 1.39
THUMPD2-209ENST00000531687 USP47Q96K76 1375 aa23.75■■□□□ 1.39
THUMPD2-209ENST00000531687 SLIT3O75094 1523 aa23.74■■□□□ 1.39
THUMPD2-209ENST00000531687 GJD4Q96KN9 370 aaPredicted RBP23.74■■□□□ 1.39
THUMPD2-209ENST00000531687 FAM83GA6ND36 823 aa23.73■■□□□ 1.39
THUMPD2-209ENST00000531687 TESK2Q96S53 571 aa23.73■■□□□ 1.39
THUMPD2-209ENST00000531687 VPS72Q15906 364 aa23.72■■□□□ 1.39
THUMPD2-209ENST00000531687 NUTM2GQ5VZR2 741 aa23.72■■□□□ 1.39
THUMPD2-209ENST00000531687 PUS7Q96PZ0 661 aaKnown RBP23.72■■□□□ 1.39
THUMPD2-209ENST00000531687 ZNF692Q9BU19 519 aaPredicted RBP23.72■■□□□ 1.39
THUMPD2-209ENST00000531687 KIAA0232Q92628 1395 aa23.72■■□□□ 1.39
THUMPD2-209ENST00000531687 USP54Q70EL1 1684 aa23.72■■□□□ 1.39
THUMPD2-209ENST00000531687 LMO7Q8WWI1 1683 aa23.72■■□□□ 1.39
THUMPD2-209ENST00000531687 CD163L1Q9NR16 1453 aa23.71■■□□□ 1.39
THUMPD2-209ENST00000531687 ST20-MTHFSA0A0A6YYL1 179 aa23.71■■□□□ 1.39
THUMPD2-209ENST00000531687 SLC24A1O60721 1099 aa23.71■■□□□ 1.39
THUMPD2-209ENST00000531687 PRDM11Q9NQV5 511 aa23.71■■□□□ 1.39
THUMPD2-209ENST00000531687 CPDO75976 1380 aa23.7■■□□□ 1.38
THUMPD2-209ENST00000531687 NLRP13Q86W25 1043 aa23.7■■□□□ 1.38
THUMPD2-209ENST00000531687 BTG4Q9NY30 223 aa23.69■■□□□ 1.38
THUMPD2-209ENST00000531687 KTN1Q86UP2 1357 aaKnown RBP23.68■■□□□ 1.38
THUMPD2-209ENST00000531687 NINLQ9Y2I6 1382 aa23.68■■□□□ 1.38
THUMPD2-209ENST00000531687 TTC21AQ8NDW8 1320 aa23.68■■□□□ 1.38
THUMPD2-209ENST00000531687 TTC21BQ7Z4L5 1316 aa23.67■■□□□ 1.38
THUMPD2-209ENST00000531687 BRWD3Q6RI45 1802 aa23.66■■□□□ 1.38
THUMPD2-209ENST00000531687 ZC3H6P61129 1189 aaKnown RBP23.64■■□□□ 1.37
THUMPD2-209ENST00000531687 GCP02774 474 aa23.63■■□□□ 1.37
THUMPD2-209ENST00000531687 NLRP6P59044 892 aa23.63■■□□□ 1.37
THUMPD2-209ENST00000531687 EDC4Q6P2E9 1401 aaKnown RBP23.63■■□□□ 1.37
THUMPD2-209ENST00000531687 UPF1Q92900 1129 aaKnown RBP eCLIP23.63■■□□□ 1.37
THUMPD2-209ENST00000531687 CCDC9Q9Y3X0 531 aaKnown RBP23.63■■□□□ 1.37
THUMPD2-209ENST00000531687 A0A1W2PP64 1363 aa23.63■■□□□ 1.37
THUMPD2-209ENST00000531687 THSD7AQ9UPZ6 1657 aa23.62■■□□□ 1.37
THUMPD2-209ENST00000531687 CAMTA1Q9Y6Y1 1673 aa23.62■■□□□ 1.37
THUMPD2-209ENST00000531687 CHRNA2Q15822 529 aa23.61■■□□□ 1.37
THUMPD2-209ENST00000531687 HDGFL2Q7Z4V5 671 aaPredicted RBP23.61■■□□□ 1.37
THUMPD2-209ENST00000531687 TMC1Q8TDI8 760 aa23.61■■□□□ 1.37
THUMPD2-209ENST00000531687 NFAT5O94916 1531 aa23.6■■□□□ 1.37
THUMPD2-209ENST00000531687 ADRA2BP18089 450 aa23.6■■□□□ 1.37
THUMPD2-209ENST00000531687 TERF2IPQ9NYB0 399 aa23.6■■□□□ 1.37
THUMPD2-209ENST00000531687 TMF1P82094 1093 aa23.59■■□□□ 1.37
THUMPD2-209ENST00000531687 SLC12A5Q9H2X9 1139 aa23.59■■□□□ 1.37
THUMPD2-209ENST00000531687 MYOM1P52179 1685 aa23.59■■□□□ 1.37
THUMPD2-209ENST00000531687 COL18A1P39060 1754 aa23.59■■□□□ 1.37
THUMPD2-209ENST00000531687 ABCC6O95255 1503 aa23.59■■□□□ 1.37
THUMPD2-209ENST00000531687 SPATA31A5Q5VU36 1347 aa23.59■■□□□ 1.37
THUMPD2-209ENST00000531687 SPATA31A7Q8IWB4 1347 aa23.59■■□□□ 1.37
THUMPD2-209ENST00000531687 COL5A2P05997 1499 aaPredicted RBP23.58■■□□□ 1.37
THUMPD2-209ENST00000531687 USP31Q70CQ4 1352 aa23.58■■□□□ 1.37
THUMPD2-209ENST00000531687 ONECUT3O60422 494 aaPredicted RBP23.58■■□□□ 1.37
THUMPD2-209ENST00000531687 AATKQ6ZMQ8 1374 aa23.56■■□□□ 1.36
THUMPD2-209ENST00000531687 SEPT12Q8IYM1 358 aa23.55■■□□□ 1.36
THUMPD2-209ENST00000531687 KCNH5Q8NCM2 988 aa23.55■■□□□ 1.36
THUMPD2-209ENST00000531687 ANKRD36BQ8N2N9 1353 aa23.54■■□□□ 1.36
THUMPD2-209ENST00000531687 SPATA31A1Q5TZJ5 1347 aa23.54■■□□□ 1.36
THUMPD2-209ENST00000531687 OVOS2A0A0J9YW53 1432 aa23.53■■□□□ 1.36
THUMPD2-209ENST00000531687 OVOS2Q6IE36 1432 aa23.53■■□□□ 1.36
THUMPD2-209ENST00000531687 CDCA8Q53HL2 280 aa23.53■■□□□ 1.36
THUMPD2-209ENST00000531687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.53■■□□□ 1.36
THUMPD2-209ENST00000531687 LTN1O94822 1766 aa23.52■■□□□ 1.36
THUMPD2-209ENST00000531687 FAM98CQ17RN3 349 aaKnown RBP23.52■■□□□ 1.36
THUMPD2-209ENST00000531687 STRN4Q9NRL3 753 aa23.52■■□□□ 1.36
THUMPD2-209ENST00000531687 NME9Q86XW9 330 aa23.51■■□□□ 1.35
THUMPD2-209ENST00000531687 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
THUMPD2-209ENST00000531687 WNK3Q9BYP7 1800 aa23.5■■□□□ 1.35
THUMPD2-209ENST00000531687 EVA1CP58658 441 aa23.49■■□□□ 1.35
THUMPD2-209ENST00000531687 ARHGEF25Q86VW2 580 aa23.49■■□□□ 1.35
THUMPD2-209ENST00000531687 CRB1P82279 1406 aa23.49■■□□□ 1.35
THUMPD2-209ENST00000531687 KIF20BQ96Q89 1820 aa23.48■■□□□ 1.35
THUMPD2-209ENST00000531687 A0A0G2JS52 829 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms