RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
AMBRA1-210ENST00000531542 ITSN1Q15811 1721 aa19.25■□□□□ 0.67
AMBRA1-210ENST00000531542 PAK3O75914 559 aaPredicted RBP19.25■□□□□ 0.67
AMBRA1-210ENST00000531542 NBPF8Q3BBV2 869 aa19.25■□□□□ 0.67
AMBRA1-210ENST00000531542 CCDC9Q9Y3X0 531 aaKnown RBP19.24■□□□□ 0.67
AMBRA1-210ENST00000531542 COL14A1Q05707 1796 aaKnown RBP19.24■□□□□ 0.67
AMBRA1-210ENST00000531542 ACEP12821 1306 aa19.24■□□□□ 0.67
AMBRA1-210ENST00000531542 CENPJQ9HC77 1338 aaPredicted RBP19.24■□□□□ 0.67
AMBRA1-210ENST00000531542 PLEKHG5O94827 1062 aa19.23■□□□□ 0.67
AMBRA1-210ENST00000531542 KRT27Q7Z3Y8 459 aa19.23■□□□□ 0.67
AMBRA1-210ENST00000531542 L3MBTL2Q969R5 705 aa19.23■□□□□ 0.67
AMBRA1-210ENST00000531542 BRD4O60885 1362 aaPredicted RBP19.22■□□□□ 0.67
AMBRA1-210ENST00000531542 SPATA31A5Q5VU36 1347 aa19.22■□□□□ 0.67
AMBRA1-210ENST00000531542 SPATA31A7Q8IWB4 1347 aa19.22■□□□□ 0.67
AMBRA1-210ENST00000531542 TOPAZ1Q8N9V7 1692 aa19.21■□□□□ 0.67
AMBRA1-210ENST00000531542 PRDM11Q9NQV5 511 aa19.21■□□□□ 0.67
AMBRA1-210ENST00000531542 ZRANB1Q9UGI0 708 aa19.21■□□□□ 0.67
AMBRA1-210ENST00000531542 CRYBG1Q9Y4K1 1723 aa19.21■□□□□ 0.67
AMBRA1-210ENST00000531542 NRAPQ86VF7 1730 aa19.2■□□□□ 0.66
AMBRA1-210ENST00000531542 FAM98CQ17RN3 349 aaKnown RBP19.18■□□□□ 0.66
AMBRA1-210ENST00000531542 KIAA0232Q92628 1395 aa19.18■□□□□ 0.66
AMBRA1-210ENST00000531542 SRPK2P78362 688 aaKnown RBP19.17■□□□□ 0.66
AMBRA1-210ENST00000531542 USP19O94966 1318 aa19.17■□□□□ 0.66
AMBRA1-210ENST00000531542 PPIP5K1Q6PFW1 1433 aa19.17■□□□□ 0.66
AMBRA1-210ENST00000531542 SF3B2Q13435 895 aaKnown RBP19.16■□□□□ 0.66
AMBRA1-210ENST00000531542 ABTB2Q8N961 1025 aa19.16■□□□□ 0.66
AMBRA1-210ENST00000531542 CPDO75976 1380 aa19.16■□□□□ 0.66
AMBRA1-210ENST00000531542 BRWD3Q6RI45 1802 aa19.16■□□□□ 0.66
AMBRA1-210ENST00000531542 SIN3AQ96ST3 1273 aa19.15■□□□□ 0.66
AMBRA1-210ENST00000531542 CABP2Q9NPB3 220 aa19.15■□□□□ 0.66
AMBRA1-210ENST00000531542 SPATA31A1Q5TZJ5 1347 aa19.15■□□□□ 0.66
AMBRA1-210ENST00000531542 SRCAPQ6ZRS2 3230 aa19.14■□□□□ 0.66
AMBRA1-210ENST00000531542 NLRP13Q86W25 1043 aa19.14■□□□□ 0.65
AMBRA1-210ENST00000531542 EVC2Q86UK5 1308 aa19.13■□□□□ 0.65
AMBRA1-210ENST00000531542 PHRF1Q9P1Y6 1649 aaKnown RBP19.12■□□□□ 0.65
AMBRA1-210ENST00000531542 ZC3H6P61129 1189 aaKnown RBP19.12■□□□□ 0.65
AMBRA1-210ENST00000531542 A0A0G2JS52 829 aa19.11■□□□□ 0.65
AMBRA1-210ENST00000531542 MYT1Q01538 1121 aa19.11■□□□□ 0.65
AMBRA1-210ENST00000531542 CHRNA2Q15822 529 aa19.11■□□□□ 0.65
AMBRA1-210ENST00000531542 NUTM2GQ5VZR2 741 aa19.11■□□□□ 0.65
AMBRA1-210ENST00000531542 BARGINQ6ZT62 677 aa19.11■□□□□ 0.65
AMBRA1-210ENST00000531542 DEFB132Q7Z7B7 95 aa19.11■□□□□ 0.65
AMBRA1-210ENST00000531542 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
AMBRA1-210ENST00000531542 THSD7AQ9UPZ6 1657 aa19.11■□□□□ 0.65
AMBRA1-210ENST00000531542 USP6P35125 1406 aa19.1■□□□□ 0.65
AMBRA1-210ENST00000531542 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
AMBRA1-210ENST00000531542 GCP02774 474 aa19.1■□□□□ 0.65
AMBRA1-210ENST00000531542 TRPM1Q7Z4N2 1603 aa19.1■□□□□ 0.65
AMBRA1-210ENST00000531542 SSH2Q76I76 1423 aa19.09■□□□□ 0.65
AMBRA1-210ENST00000531542 NRKQ7Z2Y5 1582 aa19.09■□□□□ 0.65
AMBRA1-210ENST00000531542 QRICH2Q9H0J4 1663 aa19.08■□□□□ 0.65
AMBRA1-210ENST00000531542 BAG6P46379 1132 aa19.08■□□□□ 0.64
AMBRA1-210ENST00000531542 NEUROD1Q13562 356 aa19.08■□□□□ 0.64
AMBRA1-210ENST00000531542 ZNF692Q9BU19 519 aaPredicted RBP19.08■□□□□ 0.64
AMBRA1-210ENST00000531542 EVA1CP58658 441 aa19.07■□□□□ 0.64
AMBRA1-210ENST00000531542 STRN4Q9NRL3 753 aa19.07■□□□□ 0.64
AMBRA1-210ENST00000531542 THRAP3Q9Y2W1 955 aaKnown RBP19.07■□□□□ 0.64
AMBRA1-210ENST00000531542 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
AMBRA1-210ENST00000531542 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
AMBRA1-210ENST00000531542 DISP2A7MBM2 1401 aa19.06■□□□□ 0.64
AMBRA1-210ENST00000531542 LMO7Q8WWI1 1683 aa19.05■□□□□ 0.64
AMBRA1-210ENST00000531542 FAM196AQ6ZSG2 479 aa19.05■□□□□ 0.64
AMBRA1-210ENST00000531542 NLRP6P59044 892 aa19.04■□□□□ 0.64
AMBRA1-210ENST00000531542 TCP11L2Q8N4U5 519 aa19.04■□□□□ 0.64
AMBRA1-210ENST00000531542 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
AMBRA1-210ENST00000531542 LARP1Q6PKG0 1096 aaKnown RBP19.03■□□□□ 0.64
AMBRA1-210ENST00000531542 SLIT3O75094 1523 aa19.03■□□□□ 0.64
AMBRA1-210ENST00000531542 TTC21AQ8NDW8 1320 aa19.01■□□□□ 0.63
AMBRA1-210ENST00000531542 CPSF1Q10570 1443 aaKnown RBP19.01■□□□□ 0.63
AMBRA1-210ENST00000531542 COL5A2P05997 1499 aaPredicted RBP19.01■□□□□ 0.63
AMBRA1-210ENST00000531542 C11orf95C9JLR9 678 aaPredicted RBP19■□□□□ 0.63
AMBRA1-210ENST00000531542 FAM182BQ5T319 152 aa19■□□□□ 0.63
AMBRA1-210ENST00000531542 TTC21BQ7Z4L5 1316 aa19■□□□□ 0.63
AMBRA1-210ENST00000531542 KCNH5Q8NCM2 988 aa18.99■□□□□ 0.63
AMBRA1-210ENST00000531542 USP35Q9P2H5 1018 aa18.99■□□□□ 0.63
AMBRA1-210ENST00000531542 CRB1P82279 1406 aa18.99■□□□□ 0.63
AMBRA1-210ENST00000531542 RGPD1P0DJD0 1748 aa18.98■□□□□ 0.63
AMBRA1-210ENST00000531542 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
AMBRA1-210ENST00000531542 PARD3Q8TEW0 1356 aa18.97■□□□□ 0.63
AMBRA1-210ENST00000531542 EN1Q05925 392 aaPredicted RBP18.97■□□□□ 0.63
AMBRA1-210ENST00000531542 ARHGEF25Q86VW2 580 aa18.97■□□□□ 0.63
AMBRA1-210ENST00000531542 PUS7Q96PZ0 661 aaKnown RBP18.97■□□□□ 0.63
AMBRA1-210ENST00000531542 CARD11Q9BXL7 1154 aa18.97■□□□□ 0.63
AMBRA1-210ENST00000531542 CAMKK2Q96RR4 588 aa18.96■□□□□ 0.63
AMBRA1-210ENST00000531542 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
AMBRA1-210ENST00000531542 TONSLQ96HA7 1378 aa18.94■□□□□ 0.62
AMBRA1-210ENST00000531542 TRIM37O94972 964 aa18.94■□□□□ 0.62
AMBRA1-210ENST00000531542 KTN1Q86UP2 1357 aaKnown RBP18.93■□□□□ 0.62
AMBRA1-210ENST00000531542 CDCA7Q9BWT1 371 aaPredicted RBP18.93■□□□□ 0.62
AMBRA1-210ENST00000531542 AXIN2Q9Y2T1 843 aa18.93■□□□□ 0.62
AMBRA1-210ENST00000531542 WDR17Q8IZU2 1322 aa18.93■□□□□ 0.62
AMBRA1-210ENST00000531542 USP31Q70CQ4 1352 aa18.93■□□□□ 0.62
AMBRA1-210ENST00000531542 SLC24A1O60721 1099 aa18.92■□□□□ 0.62
AMBRA1-210ENST00000531542 TNS1Q9HBL0 1735 aaKnown RBP18.91■□□□□ 0.62
AMBRA1-210ENST00000531542 COL18A1P39060 1754 aa18.91■□□□□ 0.62
AMBRA1-210ENST00000531542 AKAP12Q02952 1782 aa18.91■□□□□ 0.62
AMBRA1-210ENST00000531542 APBA3O96018 575 aa18.91■□□□□ 0.62
AMBRA1-210ENST00000531542 EZH2Q15910 746 aaKnown RBP18.91■□□□□ 0.62
AMBRA1-210ENST00000531542 ABCC6O95255 1503 aa18.9■□□□□ 0.62
AMBRA1-210ENST00000531542 TOM1L2Q6ZVM7 507 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms