RNA–Protein interactions for RNA: ENST00000531280.1

PCNX3-205, Transcript of pecanex 3, humanhuman

TSL 5

Gene PCNX3, Length 472 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-205ENST00000531280 CABP2Q9NPB3 220 aa23.06■■□□□ 1.28
PCNX3-205ENST00000531280 ALS2Q96Q42 1657 aa23.06■■□□□ 1.28
PCNX3-205ENST00000531280 BTG4Q9NY30 223 aa23.05■■□□□ 1.28
PCNX3-205ENST00000531280 CCDC9Q9Y3X0 531 aaKnown RBP23.05■■□□□ 1.28
PCNX3-205ENST00000531280 SEPT12Q8IYM1 358 aa23.04■■□□□ 1.28
PCNX3-205ENST00000531280 GLI3P10071 1580 aa23.04■■□□□ 1.28
PCNX3-205ENST00000531280 CCDC125Q86Z20 511 aa23.03■■□□□ 1.28
PCNX3-205ENST00000531280 NUTM2GQ5VZR2 741 aa23.02■■□□□ 1.28
PCNX3-205ENST00000531280 ABCA3Q99758 1704 aa23.01■■□□□ 1.27
PCNX3-205ENST00000531280 PRDM11Q9NQV5 511 aa23■■□□□ 1.27
PCNX3-205ENST00000531280 CABP1Q9NZU7 370 aa23■■□□□ 1.27
PCNX3-205ENST00000531280 ITSN1Q15811 1721 aa22.99■■□□□ 1.27
PCNX3-205ENST00000531280 ABTB2Q8N961 1025 aa22.99■■□□□ 1.27
PCNX3-205ENST00000531280 NWD2Q9ULI1 1742 aa22.99■■□□□ 1.27
PCNX3-205ENST00000531280 ROCK2O75116 1388 aaKnown RBP22.98■■□□□ 1.27
PCNX3-205ENST00000531280 PPIP5K1Q6PFW1 1433 aa22.98■■□□□ 1.27
PCNX3-205ENST00000531280 PLCH1Q4KWH8 1693 aa22.97■■□□□ 1.27
PCNX3-205ENST00000531280 ZC3H6P61129 1189 aaKnown RBP22.97■■□□□ 1.27
PCNX3-205ENST00000531280 TRIM26Q12899 539 aaPredicted RBP22.97■■□□□ 1.27
PCNX3-205ENST00000531280 EVC2Q86UK5 1308 aa22.97■■□□□ 1.27
PCNX3-205ENST00000531280 CHRNA2Q15822 529 aa22.96■■□□□ 1.27
PCNX3-205ENST00000531280 KIAA0232Q92628 1395 aa22.96■■□□□ 1.27
PCNX3-205ENST00000531280 TOPAZ1Q8N9V7 1692 aa22.96■■□□□ 1.27
PCNX3-205ENST00000531280 FAM98CQ17RN3 349 aaKnown RBP22.95■■□□□ 1.26
PCNX3-205ENST00000531280 SPATA31A5Q5VU36 1347 aa22.95■■□□□ 1.26
PCNX3-205ENST00000531280 SPATA31A7Q8IWB4 1347 aa22.95■■□□□ 1.26
PCNX3-205ENST00000531280 TRPM1Q7Z4N2 1603 aa22.94■■□□□ 1.26
PCNX3-205ENST00000531280 KRT27Q7Z3Y8 459 aa22.94■■□□□ 1.26
PCNX3-205ENST00000531280 NLRP13Q86W25 1043 aa22.94■■□□□ 1.26
PCNX3-205ENST00000531280 COL14A1Q05707 1796 aaKnown RBP22.94■■□□□ 1.26
PCNX3-205ENST00000531280 BRD4O60885 1362 aaPredicted RBP22.93■■□□□ 1.26
PCNX3-205ENST00000531280 CRYBG1Q9Y4K1 1723 aa22.92■■□□□ 1.26
PCNX3-205ENST00000531280 USP19O94966 1318 aa22.91■■□□□ 1.26
PCNX3-205ENST00000531280 GCP02774 474 aa22.91■■□□□ 1.26
PCNX3-205ENST00000531280 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
PCNX3-205ENST00000531280 EP400Q96L91 3159 aa22.9■■□□□ 1.26
PCNX3-205ENST00000531280 A0A0G2JS52 829 aa22.89■■□□□ 1.25
PCNX3-205ENST00000531280 MYT1Q01538 1121 aa22.89■■□□□ 1.25
PCNX3-205ENST00000531280 ZNF692Q9BU19 519 aaPredicted RBP22.89■■□□□ 1.25
PCNX3-205ENST00000531280 NRAPQ86VF7 1730 aa22.88■■□□□ 1.25
PCNX3-205ENST00000531280 SPATA31A1Q5TZJ5 1347 aa22.88■■□□□ 1.25
PCNX3-205ENST00000531280 CARD11Q9BXL7 1154 aa22.88■■□□□ 1.25
PCNX3-205ENST00000531280 STRN4Q9NRL3 753 aa22.88■■□□□ 1.25
PCNX3-205ENST00000531280 BLMP54132 1417 aaPredicted RBP22.88■■□□□ 1.25
PCNX3-205ENST00000531280 BRWD3Q6RI45 1802 aa22.87■■□□□ 1.25
PCNX3-205ENST00000531280 EVA1CP58658 441 aa22.87■■□□□ 1.25
PCNX3-205ENST00000531280 NLRP6P59044 892 aa22.87■■□□□ 1.25
PCNX3-205ENST00000531280 USP6P35125 1406 aa22.87■■□□□ 1.25
PCNX3-205ENST00000531280 CPDO75976 1380 aa22.87■■□□□ 1.25
PCNX3-205ENST00000531280 TONSLQ96HA7 1378 aa22.87■■□□□ 1.25
PCNX3-205ENST00000531280 SSH2Q76I76 1423 aa22.86■■□□□ 1.25
PCNX3-205ENST00000531280 ZRANB1Q9UGI0 708 aa22.84■■□□□ 1.25
PCNX3-205ENST00000531280 PHRF1Q9P1Y6 1649 aaKnown RBP22.83■■□□□ 1.25
PCNX3-205ENST00000531280 SF3B2Q13435 895 aaKnown RBP22.83■■□□□ 1.25
PCNX3-205ENST00000531280 DEFB132Q7Z7B7 95 aa22.83■■□□□ 1.25
PCNX3-205ENST00000531280 LARP1Q6PKG0 1096 aaKnown RBP22.82■■□□□ 1.24
PCNX3-205ENST00000531280 TTC21BQ7Z4L5 1316 aa22.82■■□□□ 1.24
PCNX3-205ENST00000531280 SBNO2Q9Y2G9 1366 aa22.81■■□□□ 1.24
PCNX3-205ENST00000531280 FAM182BQ5T319 152 aa22.81■■□□□ 1.24
PCNX3-205ENST00000531280 CAMTA1Q9Y6Y1 1673 aa22.81■■□□□ 1.24
PCNX3-205ENST00000531280 BARGINQ6ZT62 677 aa22.8■■□□□ 1.24
PCNX3-205ENST00000531280 USP35Q9P2H5 1018 aa22.8■■□□□ 1.24
PCNX3-205ENST00000531280 CPSF1Q10570 1443 aaKnown RBP22.79■■□□□ 1.24
PCNX3-205ENST00000531280 NRKQ7Z2Y5 1582 aa22.78■■□□□ 1.24
PCNX3-205ENST00000531280 TCP11L2Q8N4U5 519 aa22.77■■□□□ 1.24
PCNX3-205ENST00000531280 TTC21AQ8NDW8 1320 aa22.77■■□□□ 1.24
PCNX3-205ENST00000531280 AATKQ6ZMQ8 1374 aa22.76■■□□□ 1.23
PCNX3-205ENST00000531280 ZBTB7CA1YPR0 619 aa22.75■■□□□ 1.23
PCNX3-205ENST00000531280 PUS7Q96PZ0 661 aaKnown RBP22.75■■□□□ 1.23
PCNX3-205ENST00000531280 THRAP3Q9Y2W1 955 aaKnown RBP22.75■■□□□ 1.23
PCNX3-205ENST00000531280 KTN1Q86UP2 1357 aaKnown RBP22.75■■□□□ 1.23
PCNX3-205ENST00000531280 KCNH5Q8NCM2 988 aa22.74■■□□□ 1.23
PCNX3-205ENST00000531280 SLC12A5Q9H2X9 1139 aa22.74■■□□□ 1.23
PCNX3-205ENST00000531280 THSD7AQ9UPZ6 1657 aa22.74■■□□□ 1.23
PCNX3-205ENST00000531280 FAM196AQ6ZSG2 479 aa22.73■■□□□ 1.23
PCNX3-205ENST00000531280 ARHGEF25Q86VW2 580 aa22.73■■□□□ 1.23
PCNX3-205ENST00000531280 AXIN2Q9Y2T1 843 aa22.73■■□□□ 1.23
PCNX3-205ENST00000531280 LMO7Q8WWI1 1683 aa22.73■■□□□ 1.23
PCNX3-205ENST00000531280 SLIT3O75094 1523 aa22.72■■□□□ 1.23
PCNX3-205ENST00000531280 BAG6P46379 1132 aa22.72■■□□□ 1.23
PCNX3-205ENST00000531280 TMC1Q8TDI8 760 aa22.71■■□□□ 1.23
PCNX3-205ENST00000531280 TESK2Q96S53 571 aa22.71■■□□□ 1.23
PCNX3-205ENST00000531280 ST20-MTHFSA0A0A6YYL1 179 aa22.7■■□□□ 1.22
PCNX3-205ENST00000531280 PDE3BQ13370 1112 aa22.7■■□□□ 1.22
PCNX3-205ENST00000531280 COL5A2P05997 1499 aaPredicted RBP22.7■■□□□ 1.22
PCNX3-205ENST00000531280 PIK3C2AO00443 1686 aa22.69■■□□□ 1.22
PCNX3-205ENST00000531280 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.69■■□□□ 1.22
PCNX3-205ENST00000531280 EN1Q05925 392 aaPredicted RBP22.68■■□□□ 1.22
PCNX3-205ENST00000531280 HDGFL2Q7Z4V5 671 aaPredicted RBP22.68■■□□□ 1.22
PCNX3-205ENST00000531280 CRB1P82279 1406 aa22.67■■□□□ 1.22
PCNX3-205ENST00000531280 SOX12O15370 315 aa22.67■■□□□ 1.22
PCNX3-205ENST00000531280 SLC24A1O60721 1099 aa22.67■■□□□ 1.22
PCNX3-205ENST00000531280 TRIM37O94972 964 aa22.67■■□□□ 1.22
PCNX3-205ENST00000531280 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
PCNX3-205ENST00000531280 AKAP12Q02952 1782 aa22.66■■□□□ 1.22
PCNX3-205ENST00000531280 USP31Q70CQ4 1352 aa22.66■■□□□ 1.22
PCNX3-205ENST00000531280 TOM1L2Q6ZVM7 507 aa22.66■■□□□ 1.22
PCNX3-205ENST00000531280 TERF2IPQ9NYB0 399 aa22.66■■□□□ 1.22
PCNX3-205ENST00000531280 NME9Q86XW9 330 aa22.65■■□□□ 1.22
PCNX3-205ENST00000531280 WDR17Q8IZU2 1322 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms