RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 CYB5RLQ6IPT4 315 aa17.47■□□□□ 0.39
LRRK1-207ENST00000531270 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
LRRK1-207ENST00000531270 VPS8Q8N3P4 1428 aa17.46■□□□□ 0.39
LRRK1-207ENST00000531270 STK38Q15208 465 aa17.46■□□□□ 0.39
LRRK1-207ENST00000531270 GGNBP2Q9H3C7 697 aa17.46■□□□□ 0.39
LRRK1-207ENST00000531270 ANKRD18AQ8IVF6 992 aa17.45■□□□□ 0.38
LRRK1-207ENST00000531270 ZNHIT6Q9NWK9 470 aaKnown RBP17.45■□□□□ 0.38
LRRK1-207ENST00000531270 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
LRRK1-207ENST00000531270 CCDC181Q5TID7 509 aa17.45■□□□□ 0.38
LRRK1-207ENST00000531270 SERPINC1P01008 464 aa17.45■□□□□ 0.38
LRRK1-207ENST00000531270 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
LRRK1-207ENST00000531270 GOLGA6L10A6NI86 522 aa17.44■□□□□ 0.38
LRRK1-207ENST00000531270 MPHOSPH10O00566 681 aaKnown RBP17.44■□□□□ 0.38
LRRK1-207ENST00000531270 CLASRPQ8N2M8 674 aaKnown RBP17.44■□□□□ 0.38
LRRK1-207ENST00000531270 LEKR1Q6ZMV7 388 aa17.44■□□□□ 0.38
LRRK1-207ENST00000531270 FIBPO43427 364 aa17.44■□□□□ 0.38
LRRK1-207ENST00000531270 FAM177A1Q8N128 213 aaPredicted RBP17.44■□□□□ 0.38
LRRK1-207ENST00000531270 FAM193AP78312 1265 aa17.44■□□□□ 0.38
LRRK1-207ENST00000531270 SF3B2Q13435 895 aaKnown RBP17.43■□□□□ 0.38
LRRK1-207ENST00000531270 NUP133Q8WUM0 1156 aa17.43■□□□□ 0.38
LRRK1-207ENST00000531270 PRPF40AO75400 957 aaKnown RBP17.43■□□□□ 0.38
LRRK1-207ENST00000531270 SSBP05455 408 aaKnown RBP eCLIP17.43■□□□□ 0.38
LRRK1-207ENST00000531270 NLRP6P59044 892 aa17.42■□□□□ 0.38
LRRK1-207ENST00000531270 MPNDQ8N594 471 aa17.42■□□□□ 0.38
LRRK1-207ENST00000531270 TSPY26PQ9H489 355 aa17.42■□□□□ 0.38
LRRK1-207ENST00000531270 MAP4K4O95819 1239 aaPredicted RBP17.42■□□□□ 0.38
LRRK1-207ENST00000531270 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
LRRK1-207ENST00000531270 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
LRRK1-207ENST00000531270 NUTM2BA6NNL0 878 aaPredicted RBP17.41■□□□□ 0.38
LRRK1-207ENST00000531270 NUTM2EB1AL46 878 aaPredicted RBP17.41■□□□□ 0.38
LRRK1-207ENST00000531270 NUTM2AQ8IVF1 878 aaPredicted RBP17.41■□□□□ 0.38
LRRK1-207ENST00000531270 C1orf115Q9H7X2 142 aa17.41■□□□□ 0.38
LRRK1-207ENST00000531270 NEK4P51957 841 aa17.41■□□□□ 0.38
LRRK1-207ENST00000531270 CHMP4BP1P59074 171 aa17.41■□□□□ 0.38
LRRK1-207ENST00000531270 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
LRRK1-207ENST00000531270 CCDC158Q5M9N0 1113 aa17.41■□□□□ 0.38
LRRK1-207ENST00000531270 USP47Q96K76 1375 aa17.41■□□□□ 0.38
LRRK1-207ENST00000531270 SSR1P43307 286 aaKnown RBP17.41■□□□□ 0.38
LRRK1-207ENST00000531270 PIBF1Q8WXW3 757 aa17.41■□□□□ 0.38
LRRK1-207ENST00000531270 SIL1Q9H173 461 aa17.41■□□□□ 0.38
LRRK1-207ENST00000531270 PPFIBP1Q86W92 1011 aa17.4■□□□□ 0.38
LRRK1-207ENST00000531270 GNL3LQ9NVN8 582 aaKnown RBP17.4■□□□□ 0.38
LRRK1-207ENST00000531270 ZSCAN29Q8IWY8 852 aaPredicted RBP17.4■□□□□ 0.38
LRRK1-207ENST00000531270 FHOD3Q2V2M9 1422 aa17.4■□□□□ 0.38
LRRK1-207ENST00000531270 RBM10P98175 930 aaKnown RBP17.4■□□□□ 0.38
LRRK1-207ENST00000531270 CCDC69A6NI79 296 aa17.39■□□□□ 0.37
LRRK1-207ENST00000531270 SOGA3Q5TF21 947 aa17.39■□□□□ 0.37
LRRK1-207ENST00000531270 LETM1O95202 739 aaPredicted RBP17.39■□□□□ 0.37
LRRK1-207ENST00000531270 CCDC18Q5T9S5 1454 aa17.39■□□□□ 0.37
LRRK1-207ENST00000531270 CCP110O43303 1012 aa17.38■□□□□ 0.37
LRRK1-207ENST00000531270 PIP4K2AP48426 406 aaPredicted RBP17.38■□□□□ 0.37
LRRK1-207ENST00000531270 EZRP15311 586 aaKnown RBP17.38■□□□□ 0.37
LRRK1-207ENST00000531270 CCDC30Q5VVM6 783 aa17.38■□□□□ 0.37
LRRK1-207ENST00000531270 ZBED9Q6R2W3 1325 aa17.38■□□□□ 0.37
LRRK1-207ENST00000531270 KIAA0754O94854 1291 aa17.37■□□□□ 0.37
LRRK1-207ENST00000531270 ESCO1Q5FWF5 840 aa17.37■□□□□ 0.37
LRRK1-207ENST00000531270 STIM1Q13586 685 aa17.37■□□□□ 0.37
LRRK1-207ENST00000531270 ABTB2Q8N961 1025 aa17.37■□□□□ 0.37
LRRK1-207ENST00000531270 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
LRRK1-207ENST00000531270 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
LRRK1-207ENST00000531270 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.36■□□□□ 0.37
LRRK1-207ENST00000531270 GBP2P32456 591 aaPredicted RBP17.36■□□□□ 0.37
LRRK1-207ENST00000531270 ZNF76P36508 570 aa17.36■□□□□ 0.37
LRRK1-207ENST00000531270 ME1P48163 572 aa17.36■□□□□ 0.37
LRRK1-207ENST00000531270 NFKBIBQ15653 356 aa17.36■□□□□ 0.37
LRRK1-207ENST00000531270 MRE11P49959 708 aa17.35■□□□□ 0.37
LRRK1-207ENST00000531270 TRIM22Q8IYM9 498 aa17.35■□□□□ 0.37
LRRK1-207ENST00000531270 LUC7LQ9NQ29 371 aaKnown RBP17.35■□□□□ 0.37
LRRK1-207ENST00000531270 TRAK2O60296 914 aa17.34■□□□□ 0.37
LRRK1-207ENST00000531270 TAF3Q5VWG9 929 aa17.34■□□□□ 0.37
LRRK1-207ENST00000531270 GOLGA6L7A0A1B0GV03 622 aa17.34■□□□□ 0.37
LRRK1-207ENST00000531270 CCDC112Q8NEF3 446 aa17.34■□□□□ 0.37
LRRK1-207ENST00000531270 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
LRRK1-207ENST00000531270 CCDC66A2RUB6 948 aa17.34■□□□□ 0.37
LRRK1-207ENST00000531270 GNAI3P08754 354 aa17.34■□□□□ 0.37
LRRK1-207ENST00000531270 USP5P45974 858 aa17.34■□□□□ 0.37
LRRK1-207ENST00000531270 JPH4Q96JJ6 628 aa17.33■□□□□ 0.37
LRRK1-207ENST00000531270 NACAP1Q9BZK3 213 aa17.33■□□□□ 0.37
LRRK1-207ENST00000531270 HIP1O00291 1037 aa17.33■□□□□ 0.37
LRRK1-207ENST00000531270 MYL6BP14649 208 aa17.33■□□□□ 0.36
LRRK1-207ENST00000531270 FKBP4Q02790 459 aaKnown RBP eCLIP17.32■□□□□ 0.36
LRRK1-207ENST00000531270 BICDL1Q6ZP65 573 aa17.32■□□□□ 0.36
LRRK1-207ENST00000531270 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
LRRK1-207ENST00000531270 JMYQ8N9B5 988 aa17.32■□□□□ 0.36
LRRK1-207ENST00000531270 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
LRRK1-207ENST00000531270 TNMDQ9H2S6 317 aa17.32■□□□□ 0.36
LRRK1-207ENST00000531270 PDCP20941 246 aa17.32■□□□□ 0.36
LRRK1-207ENST00000531270 KIF7Q2M1P5 1343 aa17.31■□□□□ 0.36
LRRK1-207ENST00000531270 DESP17661 470 aa17.31■□□□□ 0.36
LRRK1-207ENST00000531270 CABP4P57796 275 aa17.31■□□□□ 0.36
LRRK1-207ENST00000531270 DACH1Q9UI36 760 aa17.31■□□□□ 0.36
LRRK1-207ENST00000531270 MYCNP04198 464 aaPredicted RBP17.31■□□□□ 0.36
LRRK1-207ENST00000531270 ERC1Q8IUD2 1116 aa17.31■□□□□ 0.36
LRRK1-207ENST00000531270 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
LRRK1-207ENST00000531270 SCLT1Q96NL6 688 aa17.3■□□□□ 0.36
LRRK1-207ENST00000531270 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
LRRK1-207ENST00000531270 CECR2Q9BXF3 1484 aa17.3■□□□□ 0.36
LRRK1-207ENST00000531270 MBD3O95983 291 aa17.29■□□□□ 0.36
LRRK1-207ENST00000531270 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
LRRK1-207ENST00000531270 GPRASP1Q5JY77 1395 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms