RNA–Protein interactions for RNA: ENST00000531257.1

FOXRED1-211, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-211ENST00000531257 VPS72Q15906 364 aa16.54■□□□□ 0.24
FOXRED1-211ENST00000531257 NUDT16Q96DE0 195 aaKnown RBP16.54■□□□□ 0.24
FOXRED1-211ENST00000531257 A0A0G2JS52 829 aa16.53■□□□□ 0.24
FOXRED1-211ENST00000531257 MYT1Q01538 1121 aa16.53■□□□□ 0.24
FOXRED1-211ENST00000531257 SEPT12Q8IYM1 358 aa16.53■□□□□ 0.24
FOXRED1-211ENST00000531257 CDK19Q9BWU1 502 aa16.53■□□□□ 0.24
FOXRED1-211ENST00000531257 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.24
FOXRED1-211ENST00000531257 BTG4Q9NY30 223 aa16.52■□□□□ 0.24
FOXRED1-211ENST00000531257 CCDC125Q86Z20 511 aa16.51■□□□□ 0.23
FOXRED1-211ENST00000531257 NUTM2GQ5VZR2 741 aa16.49■□□□□ 0.23
FOXRED1-211ENST00000531257 BLMP54132 1417 aaPredicted RBP16.48■□□□□ 0.23
FOXRED1-211ENST00000531257 FAM98CQ17RN3 349 aaKnown RBP16.48■□□□□ 0.23
FOXRED1-211ENST00000531257 ACEP12821 1306 aa16.47■□□□□ 0.23
FOXRED1-211ENST00000531257 SRPK2P78362 688 aaKnown RBP16.47■□□□□ 0.23
FOXRED1-211ENST00000531257 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
FOXRED1-211ENST00000531257 KRT27Q7Z3Y8 459 aa16.47■□□□□ 0.23
FOXRED1-211ENST00000531257 PRDM11Q9NQV5 511 aa16.47■□□□□ 0.23
FOXRED1-211ENST00000531257 ZRANB1Q9UGI0 708 aa16.47■□□□□ 0.23
FOXRED1-211ENST00000531257 CCDC61Q9Y6R9 512 aa16.47■□□□□ 0.23
FOXRED1-211ENST00000531257 TRPM1Q7Z4N2 1603 aa16.47■□□□□ 0.23
FOXRED1-211ENST00000531257 CENPJQ9HC77 1338 aaPredicted RBP16.45■□□□□ 0.22
FOXRED1-211ENST00000531257 ONECUT3O60422 494 aaPredicted RBP16.45■□□□□ 0.22
FOXRED1-211ENST00000531257 NBPF8Q3BBV2 869 aa16.45■□□□□ 0.22
FOXRED1-211ENST00000531257 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
FOXRED1-211ENST00000531257 PPIP5K1Q6PFW1 1433 aa16.45■□□□□ 0.22
FOXRED1-211ENST00000531257 KIAA0232Q92628 1395 aa16.44■□□□□ 0.22
FOXRED1-211ENST00000531257 ZC3H6P61129 1189 aaKnown RBP16.44■□□□□ 0.22
FOXRED1-211ENST00000531257 NEUROD1Q13562 356 aa16.44■□□□□ 0.22
FOXRED1-211ENST00000531257 CHRNA2Q15822 529 aa16.44■□□□□ 0.22
FOXRED1-211ENST00000531257 DEFB132Q7Z7B7 95 aa16.44■□□□□ 0.22
FOXRED1-211ENST00000531257 L3MBTL2Q969R5 705 aa16.44■□□□□ 0.22
FOXRED1-211ENST00000531257 SIN3AQ96ST3 1273 aa16.44■□□□□ 0.22
FOXRED1-211ENST00000531257 NRKQ7Z2Y5 1582 aa16.43■□□□□ 0.22
FOXRED1-211ENST00000531257 RGPD1P0DJD0 1748 aa16.43■□□□□ 0.22
FOXRED1-211ENST00000531257 ABTB2Q8N961 1025 aa16.43■□□□□ 0.22
FOXRED1-211ENST00000531257 CABP2Q9NPB3 220 aa16.43■□□□□ 0.22
FOXRED1-211ENST00000531257 STRN4Q9NRL3 753 aa16.43■□□□□ 0.22
FOXRED1-211ENST00000531257 PLEKHG3A1L390 1219 aa16.42■□□□□ 0.22
FOXRED1-211ENST00000531257 THSD7AQ9UPZ6 1657 aa16.42■□□□□ 0.22
FOXRED1-211ENST00000531257 SPATA31A5Q5VU36 1347 aa16.42■□□□□ 0.22
FOXRED1-211ENST00000531257 SPATA31A7Q8IWB4 1347 aa16.42■□□□□ 0.22
FOXRED1-211ENST00000531257 EVA1CP58658 441 aa16.39■□□□□ 0.21
FOXRED1-211ENST00000531257 FAM182BQ5T319 152 aa16.39■□□□□ 0.21
FOXRED1-211ENST00000531257 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
FOXRED1-211ENST00000531257 TNS1Q9HBL0 1735 aaKnown RBP16.38■□□□□ 0.21
FOXRED1-211ENST00000531257 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
FOXRED1-211ENST00000531257 LMO7Q8WWI1 1683 aa16.37■□□□□ 0.21
FOXRED1-211ENST00000531257 AKAP12Q02952 1782 aa16.37■□□□□ 0.21
FOXRED1-211ENST00000531257 SPATA31A1Q5TZJ5 1347 aa16.37■□□□□ 0.21
FOXRED1-211ENST00000531257 ZBTB7CA1YPR0 619 aa16.36■□□□□ 0.21
FOXRED1-211ENST00000531257 BAG6P46379 1132 aa16.36■□□□□ 0.21
FOXRED1-211ENST00000531257 NLRP13Q86W25 1043 aa16.36■□□□□ 0.21
FOXRED1-211ENST00000531257 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
FOXRED1-211ENST00000531257 CAMTA1Q9Y6Y1 1673 aa16.36■□□□□ 0.21
FOXRED1-211ENST00000531257 PIK3C2AO00443 1686 aa16.35■□□□□ 0.21
FOXRED1-211ENST00000531257 EVC2Q86UK5 1308 aa16.35■□□□□ 0.21
FOXRED1-211ENST00000531257 SRCAPQ6ZRS2 3230 aa16.35■□□□□ 0.21
FOXRED1-211ENST00000531257 SSH2Q76I76 1423 aa16.35■□□□□ 0.21
FOXRED1-211ENST00000531257 RGPD5Q99666 1765 aa16.34■□□□□ 0.21
FOXRED1-211ENST00000531257 USP6P35125 1406 aa16.34■□□□□ 0.21
FOXRED1-211ENST00000531257 GCP02774 474 aa16.33■□□□□ 0.2
FOXRED1-211ENST00000531257 USP19O94966 1318 aa16.33■□□□□ 0.2
FOXRED1-211ENST00000531257 CPDO75976 1380 aa16.32■□□□□ 0.2
FOXRED1-211ENST00000531257 NLRP6P59044 892 aa16.32■□□□□ 0.2
FOXRED1-211ENST00000531257 LARP1Q6PKG0 1096 aaKnown RBP16.32■□□□□ 0.2
FOXRED1-211ENST00000531257 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
FOXRED1-211ENST00000531257 EN1Q05925 392 aaPredicted RBP16.31■□□□□ 0.2
FOXRED1-211ENST00000531257 PARP4Q9UKK3 1724 aaKnown RBP16.3■□□□□ 0.2
FOXRED1-211ENST00000531257 SLIT3O75094 1523 aa16.29■□□□□ 0.2
FOXRED1-211ENST00000531257 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
FOXRED1-211ENST00000531257 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
FOXRED1-211ENST00000531257 MON2Q7Z3U7 1717 aa16.29■□□□□ 0.2
FOXRED1-211ENST00000531257 PSDA5PKW4 1024 aaPredicted RBP16.29■□□□□ 0.2
FOXRED1-211ENST00000531257 PDE3BQ13370 1112 aa16.29■□□□□ 0.2
FOXRED1-211ENST00000531257 TRIM37O94972 964 aa16.28■□□□□ 0.2
FOXRED1-211ENST00000531257 FAM196AQ6ZSG2 479 aa16.28■□□□□ 0.2
FOXRED1-211ENST00000531257 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
FOXRED1-211ENST00000531257 TCP11L2Q8N4U5 519 aa16.28■□□□□ 0.2
FOXRED1-211ENST00000531257 COL18A1P39060 1754 aa16.28■□□□□ 0.2
FOXRED1-211ENST00000531257 SOX12O15370 315 aa16.26■□□□□ 0.19
FOXRED1-211ENST00000531257 LRP5O75197 1615 aa16.26■□□□□ 0.19
FOXRED1-211ENST00000531257 TONSLQ96HA7 1378 aa16.26■□□□□ 0.19
FOXRED1-211ENST00000531257 EZH2Q15910 746 aaKnown RBP16.25■□□□□ 0.19
FOXRED1-211ENST00000531257 ZNF692Q9BU19 519 aaPredicted RBP16.25■□□□□ 0.19
FOXRED1-211ENST00000531257 CARD11Q9BXL7 1154 aa16.25■□□□□ 0.19
FOXRED1-211ENST00000531257 THRAP3Q9Y2W1 955 aaKnown RBP16.25■□□□□ 0.19
FOXRED1-211ENST00000531257 CRB1P82279 1406 aa16.25■□□□□ 0.19
FOXRED1-211ENST00000531257 SBF2Q86WG5 1849 aa16.24■□□□□ 0.19
FOXRED1-211ENST00000531257 TTC21BQ7Z4L5 1316 aa16.24■□□□□ 0.19
FOXRED1-211ENST00000531257 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
FOXRED1-211ENST00000531257 LTN1O94822 1766 aa16.24■□□□□ 0.19
FOXRED1-211ENST00000531257 APBA3O96018 575 aa16.24■□□□□ 0.19
FOXRED1-211ENST00000531257 KTN1Q86UP2 1357 aaKnown RBP16.24■□□□□ 0.19
FOXRED1-211ENST00000531257 RREB1Q92766 1687 aa16.24■□□□□ 0.19
FOXRED1-211ENST00000531257 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
FOXRED1-211ENST00000531257 TOM1L2Q6ZVM7 507 aa16.23■□□□□ 0.19
FOXRED1-211ENST00000531257 AATKQ6ZMQ8 1374 aa16.23■□□□□ 0.19
FOXRED1-211ENST00000531257 NUP188Q5SRE5 1749 aa16.22■□□□□ 0.19
FOXRED1-211ENST00000531257 CPSF1Q10570 1443 aaKnown RBP16.22■□□□□ 0.19
FOXRED1-211ENST00000531257 TTC21AQ8NDW8 1320 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms