RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 QTRT2Q9H974 415 aaKnown RBP12.68□□□□□ -0.38
POLB-216ENST00000530566 PHF14O94880 888 aa12.67□□□□□ -0.38
POLB-216ENST00000530566 PROSER2Q86WR7 435 aaPredicted RBP12.67□□□□□ -0.38
POLB-216ENST00000530566 ZBED2Q9BTP6 218 aa12.67□□□□□ -0.38
POLB-216ENST00000530566 LRP5O75197 1615 aa12.66□□□□□ -0.38
POLB-216ENST00000530566 SCAF11Q99590 1463 aaKnown RBP12.66□□□□□ -0.38
POLB-216ENST00000530566 HNRNPMP52272 730 aaKnown RBP eCLIP12.66□□□□□ -0.38
POLB-216ENST00000530566 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
POLB-216ENST00000530566 CCDC125Q86Z20 511 aa12.66□□□□□ -0.38
POLB-216ENST00000530566 NGLY1Q96IV0 654 aa12.66□□□□□ -0.38
POLB-216ENST00000530566 PCDHGA10Q9Y5H3 936 aa12.66□□□□□ -0.38
POLB-216ENST00000530566 MSH6P52701 1360 aa12.65□□□□□ -0.38
POLB-216ENST00000530566 WASHC2CQ9Y4E1 1318 aa12.64□□□□□ -0.39
POLB-216ENST00000530566 MAP3K1Q13233 1512 aa12.64□□□□□ -0.39
POLB-216ENST00000530566 SYCP2Q9BX26 1530 aa12.64□□□□□ -0.39
POLB-216ENST00000530566 GOLGA8CPA6NN73 597 aa12.64□□□□□ -0.39
POLB-216ENST00000530566 DPYSL4O14531 572 aa12.64□□□□□ -0.39
POLB-216ENST00000530566 TXNDC2Q86VQ3 553 aa12.64□□□□□ -0.39
POLB-216ENST00000530566 NBPF3Q9H094 633 aa12.64□□□□□ -0.39
POLB-216ENST00000530566 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
POLB-216ENST00000530566 PPP1R3GB7ZBB8 358 aa12.63□□□□□ -0.39
POLB-216ENST00000530566 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
POLB-216ENST00000530566 EPAS1Q99814 870 aa12.63□□□□□ -0.39
POLB-216ENST00000530566 INO80Q9ULG1 1556 aaPredicted RBP12.63□□□□□ -0.39
POLB-216ENST00000530566 BHMG1C9JSJ3 638 aaPredicted RBP12.62□□□□□ -0.39
POLB-216ENST00000530566 PLA2G2EQ9NZK7 142 aa12.62□□□□□ -0.39
POLB-216ENST00000530566 ADGBQ8N7X0 1667 aa12.61□□□□□ -0.39
POLB-216ENST00000530566 KCNA6P17658 529 aa12.61□□□□□ -0.39
POLB-216ENST00000530566 LTKP29376 864 aa12.61□□□□□ -0.39
POLB-216ENST00000530566 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
POLB-216ENST00000530566 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
POLB-216ENST00000530566 C8orf37Q96NL8 207 aa12.6□□□□□ -0.39
POLB-216ENST00000530566 EID1Q9Y6B2 187 aa12.6□□□□□ -0.39
POLB-216ENST00000530566 KIF3BO15066 747 aa12.59□□□□□ -0.39
POLB-216ENST00000530566 WDR70Q9NW82 654 aa12.59□□□□□ -0.39
POLB-216ENST00000530566 EP400Q96L91 3159 aa12.59□□□□□ -0.39
POLB-216ENST00000530566 PRDM15P57071 1507 aaPredicted RBP12.57□□□□□ -0.4
POLB-216ENST00000530566 TIAM1Q13009 1591 aa12.57□□□□□ -0.4
POLB-216ENST00000530566 FMN1Q68DA7 1419 aa12.57□□□□□ -0.4
POLB-216ENST00000530566 SENP3-EIF4A1A0A087X0R7 540 aa12.57□□□□□ -0.4
POLB-216ENST00000530566 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
POLB-216ENST00000530566 NWD1Q149M9 1564 aa12.56□□□□□ -0.4
POLB-216ENST00000530566 RABGEF1Q9UJ41 708 aa12.56□□□□□ -0.4
POLB-216ENST00000530566 ABCC3O15438 1527 aa12.56□□□□□ -0.4
POLB-216ENST00000530566 DHX29Q7Z478 1369 aaKnown RBP12.56□□□□□ -0.4
POLB-216ENST00000530566 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
POLB-216ENST00000530566 PTPN5P54829 565 aa12.55□□□□□ -0.4
POLB-216ENST00000530566 WNT2BQ93097 391 aa12.55□□□□□ -0.4
POLB-216ENST00000530566 AHDC1Q5TGY3 1603 aaPredicted RBP12.55□□□□□ -0.4
POLB-216ENST00000530566 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
POLB-216ENST00000530566 UBR1Q8IWV7 1749 aa12.54□□□□□ -0.4
POLB-216ENST00000530566 E2F4Q16254 413 aa12.54□□□□□ -0.4
POLB-216ENST00000530566 NKTRP30414 1462 aaKnown RBP12.53□□□□□ -0.4
POLB-216ENST00000530566 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
POLB-216ENST00000530566 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
POLB-216ENST00000530566 ARHGAP23Q9P227 1491 aa12.53□□□□□ -0.4
POLB-216ENST00000530566 SLIT1O75093 1534 aa12.53□□□□□ -0.4
POLB-216ENST00000530566 THSD4Q6ZMP0 1018 aa12.53□□□□□ -0.4
POLB-216ENST00000530566 NHSL1Q5SYE7 1610 aa12.52□□□□□ -0.4
POLB-216ENST00000530566 COL9A1P20849 921 aa12.52□□□□□ -0.41
POLB-216ENST00000530566 PDIA6Q15084 440 aa12.52□□□□□ -0.41
POLB-216ENST00000530566 C6orf132Q5T0Z8 1188 aa12.52□□□□□ -0.41
POLB-216ENST00000530566 DDX12PQ92771 950 aa12.52□□□□□ -0.41
POLB-216ENST00000530566 SLC26A8Q96RN1 970 aa12.52□□□□□ -0.41
POLB-216ENST00000530566 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
POLB-216ENST00000530566 HRCP23327 699 aa12.51□□□□□ -0.41
POLB-216ENST00000530566 PROX2Q3B8N5 592 aa12.5□□□□□ -0.41
POLB-216ENST00000530566 DEFB132Q7Z7B7 95 aa12.5□□□□□ -0.41
POLB-216ENST00000530566 TRPC5Q9UL62 973 aaPredicted RBP12.5□□□□□ -0.41
POLB-216ENST00000530566 DIP2AQ14689 1571 aa12.5□□□□□ -0.41
POLB-216ENST00000530566 KDM5AP29375 1690 aaKnown RBP12.49□□□□□ -0.41
POLB-216ENST00000530566 BLMP54132 1417 aaPredicted RBP12.49□□□□□ -0.41
POLB-216ENST00000530566 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
POLB-216ENST00000530566 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
POLB-216ENST00000530566 LAPTM4BQ86VI4 370 aa12.49□□□□□ -0.41
POLB-216ENST00000530566 CFDP1Q9UEE9 299 aaPredicted RBP12.49□□□□□ -0.41
POLB-216ENST00000530566 USP21Q9UK80 565 aa12.49□□□□□ -0.41
POLB-216ENST00000530566 ERVK-7P63135 1459 aa12.48□□□□□ -0.41
POLB-216ENST00000530566 ANKK1Q8NFD2 765 aa12.48□□□□□ -0.41
POLB-216ENST00000530566 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
POLB-216ENST00000530566 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
POLB-216ENST00000530566 RTEL1-TNFRSF6BF6WH68 1400 aa12.47□□□□□ -0.41
POLB-216ENST00000530566 NBR1Q14596 966 aa12.47□□□□□ -0.41
POLB-216ENST00000530566 LRRIQ1Q96JM4 1722 aa12.46□□□□□ -0.41
POLB-216ENST00000530566 ADAMTS2O95450 1211 aa12.46□□□□□ -0.41
POLB-216ENST00000530566 ATF3P18847 181 aa12.46□□□□□ -0.41
POLB-216ENST00000530566 KIAA1468Q9P260 1216 aa12.46□□□□□ -0.41
POLB-216ENST00000530566 TMEM2Q9UHN6 1383 aa12.45□□□□□ -0.42
POLB-216ENST00000530566 EN1Q05925 392 aaPredicted RBP12.45□□□□□ -0.42
POLB-216ENST00000530566 LRRC59Q96AG4 307 aaKnown RBP12.45□□□□□ -0.42
POLB-216ENST00000530566 BCANQ96GW7 911 aa12.45□□□□□ -0.42
POLB-216ENST00000530566 MAP3K7O43318 606 aa12.44□□□□□ -0.42
POLB-216ENST00000530566 BRINP3Q76B58 766 aa12.44□□□□□ -0.42
POLB-216ENST00000530566 SETD5Q9C0A6 1442 aa12.44□□□□□ -0.42
POLB-216ENST00000530566 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
POLB-216ENST00000530566 TET3O43151 1660 aa12.42□□□□□ -0.42
POLB-216ENST00000530566 CCDC18Q5T9S5 1454 aa12.41□□□□□ -0.42
POLB-216ENST00000530566 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
POLB-216ENST00000530566 NCOA3Q9Y6Q9 1424 aa12.41□□□□□ -0.42
POLB-216ENST00000530566 BCL9LQ86UU0 1499 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms