RNA–Protein interactions for RNA: ENST00000530332.1

COMMD5-205, Transcript of COMM domain containing 5, humanhuman

TSL 2

Gene COMMD5, Length 1,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-205ENST00000530332 SLIT2O94813 1529 aa23.52■■□□□ 1.36
COMMD5-205ENST00000530332 POLR3AO14802 1390 aaPredicted RBP23.51■■□□□ 1.35
COMMD5-205ENST00000530332 CCDC61Q9Y6R9 512 aa23.51■■□□□ 1.35
COMMD5-205ENST00000530332 CDK12Q9NYV4 1490 aaPredicted RBP23.51■■□□□ 1.35
COMMD5-205ENST00000530332 PHRF1Q9P1Y6 1649 aaKnown RBP23.5■■□□□ 1.35
COMMD5-205ENST00000530332 RBM6P78332 1123 aaKnown RBP23.49■■□□□ 1.35
COMMD5-205ENST00000530332 CARD11Q9BXL7 1154 aa23.49■■□□□ 1.35
COMMD5-205ENST00000530332 TRPC5Q9UL62 973 aaPredicted RBP23.48■■□□□ 1.35
COMMD5-205ENST00000530332 NWD2Q9ULI1 1742 aa23.47■■□□□ 1.35
COMMD5-205ENST00000530332 PLEKHG3A1L390 1219 aa23.47■■□□□ 1.35
COMMD5-205ENST00000530332 NUTM2GQ5VZR2 741 aa23.47■■□□□ 1.35
COMMD5-205ENST00000530332 NRAPQ86VF7 1730 aa23.46■■□□□ 1.35
COMMD5-205ENST00000530332 GLI3P10071 1580 aa23.46■■□□□ 1.35
COMMD5-205ENST00000530332 EVC2Q86UK5 1308 aa23.45■■□□□ 1.34
COMMD5-205ENST00000530332 AKAP12Q02952 1782 aa23.42■■□□□ 1.34
COMMD5-205ENST00000530332 COL14A1Q05707 1796 aaKnown RBP23.42■■□□□ 1.34
COMMD5-205ENST00000530332 NRKQ7Z2Y5 1582 aa23.42■■□□□ 1.34
COMMD5-205ENST00000530332 UNC5CLQ8IV45 518 aa23.42■■□□□ 1.34
COMMD5-205ENST00000530332 CABP1Q9NZU7 370 aa23.42■■□□□ 1.34
COMMD5-205ENST00000530332 FAM83GA6ND36 823 aa23.4■■□□□ 1.34
COMMD5-205ENST00000530332 USP6P35125 1406 aa23.39■■□□□ 1.34
COMMD5-205ENST00000530332 PIK3C2AO00443 1686 aa23.39■■□□□ 1.33
COMMD5-205ENST00000530332 SBNO2Q9Y2G9 1366 aa23.38■■□□□ 1.33
COMMD5-205ENST00000530332 GJD4Q96KN9 370 aaPredicted RBP23.37■■□□□ 1.33
COMMD5-205ENST00000530332 BRWD3Q6RI45 1802 aa23.37■■□□□ 1.33
COMMD5-205ENST00000530332 KIAA0232Q92628 1395 aa23.36■■□□□ 1.33
COMMD5-205ENST00000530332 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
COMMD5-205ENST00000530332 MON2Q7Z3U7 1717 aa23.35■■□□□ 1.33
COMMD5-205ENST00000530332 UPF1Q92900 1129 aaKnown RBP eCLIP23.34■■□□□ 1.33
COMMD5-205ENST00000530332 BTG4Q9NY30 223 aa23.34■■□□□ 1.33
COMMD5-205ENST00000530332 CHRNA2Q15822 529 aa23.33■■□□□ 1.33
COMMD5-205ENST00000530332 PRDM11Q9NQV5 511 aa23.33■■□□□ 1.33
COMMD5-205ENST00000530332 ATAD2Q6PL18 1390 aa23.33■■□□□ 1.33
COMMD5-205ENST00000530332 SSH2Q76I76 1423 aa23.33■■□□□ 1.33
COMMD5-205ENST00000530332 ZC3H6P61129 1189 aaKnown RBP23.33■■□□□ 1.32
COMMD5-205ENST00000530332 CCDC9Q9Y3X0 531 aaKnown RBP23.33■■□□□ 1.32
COMMD5-205ENST00000530332 USP19O94966 1318 aa23.32■■□□□ 1.32
COMMD5-205ENST00000530332 VPS72Q15906 364 aa23.32■■□□□ 1.32
COMMD5-205ENST00000530332 EP400Q96L91 3159 aa23.3■■□□□ 1.32
COMMD5-205ENST00000530332 ST20-MTHFSA0A0A6YYL1 179 aa23.3■■□□□ 1.32
COMMD5-205ENST00000530332 CD163L1Q9NR16 1453 aa23.29■■□□□ 1.32
COMMD5-205ENST00000530332 CPSF1Q10570 1443 aaKnown RBP23.29■■□□□ 1.32
COMMD5-205ENST00000530332 LMO7Q8WWI1 1683 aa23.29■■□□□ 1.32
COMMD5-205ENST00000530332 SLIT3O75094 1523 aa23.28■■□□□ 1.32
COMMD5-205ENST00000530332 USP47Q96K76 1375 aa23.28■■□□□ 1.32
COMMD5-205ENST00000530332 TESK2Q96S53 571 aa23.28■■□□□ 1.32
COMMD5-205ENST00000530332 BRD4O60885 1362 aaPredicted RBP23.27■■□□□ 1.32
COMMD5-205ENST00000530332 CLSPNQ9HAW4 1339 aa23.27■■□□□ 1.32
COMMD5-205ENST00000530332 TTC21BQ7Z4L5 1316 aa23.26■■□□□ 1.31
COMMD5-205ENST00000530332 KTN1Q86UP2 1357 aaKnown RBP23.25■■□□□ 1.31
COMMD5-205ENST00000530332 CAMTA1Q9Y6Y1 1673 aa23.25■■□□□ 1.31
COMMD5-205ENST00000530332 NLRP6P59044 892 aa23.25■■□□□ 1.31
COMMD5-205ENST00000530332 NLRP13Q86W25 1043 aa23.25■■□□□ 1.31
COMMD5-205ENST00000530332 CCER1Q8TC90 406 aaPredicted RBP23.25■■□□□ 1.31
COMMD5-205ENST00000530332 TMC1Q8TDI8 760 aa23.25■■□□□ 1.31
COMMD5-205ENST00000530332 STRN4Q9NRL3 753 aa23.24■■□□□ 1.31
COMMD5-205ENST00000530332 ZBTB7CA1YPR0 619 aa23.23■■□□□ 1.31
COMMD5-205ENST00000530332 GCP02774 474 aa23.23■■□□□ 1.31
COMMD5-205ENST00000530332 SEPT12Q8IYM1 358 aa23.23■■□□□ 1.31
COMMD5-205ENST00000530332 SLC12A5Q9H2X9 1139 aa23.23■■□□□ 1.31
COMMD5-205ENST00000530332 FAM98CQ17RN3 349 aaKnown RBP23.22■■□□□ 1.31
COMMD5-205ENST00000530332 CPDO75976 1380 aa23.22■■□□□ 1.31
COMMD5-205ENST00000530332 THSD7AQ9UPZ6 1657 aa23.21■■□□□ 1.31
COMMD5-205ENST00000530332 A0A1W2PP64 1363 aa23.21■■□□□ 1.31
COMMD5-205ENST00000530332 SPATA31A5Q5VU36 1347 aa23.2■■□□□ 1.31
COMMD5-205ENST00000530332 SPATA31A7Q8IWB4 1347 aa23.2■■□□□ 1.31
COMMD5-205ENST00000530332 A0A0G2JS52 829 aa23.2■■□□□ 1.3
COMMD5-205ENST00000530332 SOX12O15370 315 aa23.2■■□□□ 1.3
COMMD5-205ENST00000530332 MYT1Q01538 1121 aa23.2■■□□□ 1.3
COMMD5-205ENST00000530332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.2■■□□□ 1.3
COMMD5-205ENST00000530332 ZNF692Q9BU19 519 aaPredicted RBP23.2■■□□□ 1.3
COMMD5-205ENST00000530332 ZRANB1Q9UGI0 708 aa23.2■■□□□ 1.3
COMMD5-205ENST00000530332 COL18A1P39060 1754 aa23.2■■□□□ 1.3
COMMD5-205ENST00000530332 RGPD5Q99666 1765 aa23.2■■□□□ 1.3
COMMD5-205ENST00000530332 USP54Q70EL1 1684 aa23.18■■□□□ 1.3
COMMD5-205ENST00000530332 NFAT5O94916 1531 aa23.18■■□□□ 1.3
COMMD5-205ENST00000530332 TTC21AQ8NDW8 1320 aa23.18■■□□□ 1.3
COMMD5-205ENST00000530332 COL5A2P05997 1499 aaPredicted RBP23.17■■□□□ 1.3
COMMD5-205ENST00000530332 NME9Q86XW9 330 aa23.16■■□□□ 1.3
COMMD5-205ENST00000530332 TIMELESSQ9UNS1 1208 aa23.16■■□□□ 1.3
COMMD5-205ENST00000530332 ONECUT3O60422 494 aaPredicted RBP23.15■■□□□ 1.3
COMMD5-205ENST00000530332 USP35Q9P2H5 1018 aa23.15■■□□□ 1.3
COMMD5-205ENST00000530332 SPATA31A1Q5TZJ5 1347 aa23.15■■□□□ 1.3
COMMD5-205ENST00000530332 LARP1Q6PKG0 1096 aaKnown RBP23.14■■□□□ 1.3
COMMD5-205ENST00000530332 MYOM1P52179 1685 aa23.14■■□□□ 1.29
COMMD5-205ENST00000530332 EDC4Q6P2E9 1401 aaKnown RBP23.13■■□□□ 1.29
COMMD5-205ENST00000530332 HDGFL2Q7Z4V5 671 aaPredicted RBP23.13■■□□□ 1.29
COMMD5-205ENST00000530332 LTN1O94822 1766 aa23.13■■□□□ 1.29
COMMD5-205ENST00000530332 EVA1CP58658 441 aa23.11■■□□□ 1.29
COMMD5-205ENST00000530332 KRT27Q7Z3Y8 459 aa23.11■■□□□ 1.29
COMMD5-205ENST00000530332 FAM182BQ5T319 152 aa23.1■■□□□ 1.29
COMMD5-205ENST00000530332 PUS7Q96PZ0 661 aaKnown RBP23.1■■□□□ 1.29
COMMD5-205ENST00000530332 AATKQ6ZMQ8 1374 aa23.1■■□□□ 1.29
COMMD5-205ENST00000530332 TMF1P82094 1093 aa23.09■■□□□ 1.29
COMMD5-205ENST00000530332 TERF2IPQ9NYB0 399 aa23.09■■□□□ 1.29
COMMD5-205ENST00000530332 WNK3Q9BYP7 1800 aa23.09■■□□□ 1.29
COMMD5-205ENST00000530332 USP31Q70CQ4 1352 aa23.09■■□□□ 1.29
COMMD5-205ENST00000530332 AXIN2Q9Y2T1 843 aa23.08■■□□□ 1.29
COMMD5-205ENST00000530332 NINLQ9Y2I6 1382 aa23.08■■□□□ 1.29
COMMD5-205ENST00000530332 OVOS2A0A0J9YW53 1432 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms