RNA–Protein interactions for RNA: ENST00000530310.1

NR1H3-232, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-232ENST00000530310 ALS2Q96Q42 1657 aa21.25■□□□□ 0.99
NR1H3-232ENST00000530310 BLMP54132 1417 aaPredicted RBP21.25■□□□□ 0.99
NR1H3-232ENST00000530310 NUDT16Q96DE0 195 aaKnown RBP21.25■□□□□ 0.99
NR1H3-232ENST00000530310 ATP7BP35670 1465 aa21.24■□□□□ 0.99
NR1H3-232ENST00000530310 BRWD3Q6RI45 1802 aa21.24■□□□□ 0.99
NR1H3-232ENST00000530310 KRT27Q7Z3Y8 459 aa21.23■□□□□ 0.99
NR1H3-232ENST00000530310 CDK19Q9BWU1 502 aa21.23■□□□□ 0.99
NR1H3-232ENST00000530310 ONECUT3O60422 494 aaPredicted RBP21.22■□□□□ 0.99
NR1H3-232ENST00000530310 SF3B2Q13435 895 aaKnown RBP21.22■□□□□ 0.99
NR1H3-232ENST00000530310 ITSN1Q15811 1721 aa21.21■□□□□ 0.99
NR1H3-232ENST00000530310 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
NR1H3-232ENST00000530310 COL14A1Q05707 1796 aaKnown RBP21.21■□□□□ 0.99
NR1H3-232ENST00000530310 FAM98CQ17RN3 349 aaKnown RBP21.21■□□□□ 0.99
NR1H3-232ENST00000530310 DEFB132Q7Z7B7 95 aa21.2■□□□□ 0.98
NR1H3-232ENST00000530310 PRDM11Q9NQV5 511 aa21.2■□□□□ 0.98
NR1H3-232ENST00000530310 NBPF1Q3BBV0 1214 aa21.18■□□□□ 0.98
NR1H3-232ENST00000530310 NUTM2GQ5VZR2 741 aa21.17■□□□□ 0.98
NR1H3-232ENST00000530310 KIAA1210Q9ULL0 1709 aa21.17■□□□□ 0.98
NR1H3-232ENST00000530310 CRYBG1Q9Y4K1 1723 aa21.16■□□□□ 0.98
NR1H3-232ENST00000530310 CCDC61Q9Y6R9 512 aa21.16■□□□□ 0.98
NR1H3-232ENST00000530310 ACEP12821 1306 aa21.15■□□□□ 0.98
NR1H3-232ENST00000530310 EP400Q96L91 3159 aa21.15■□□□□ 0.98
NR1H3-232ENST00000530310 KIAA0232Q92628 1395 aa21.14■□□□□ 0.98
NR1H3-232ENST00000530310 SPATA31A5Q5VU36 1347 aa21.14■□□□□ 0.97
NR1H3-232ENST00000530310 SPATA31A7Q8IWB4 1347 aa21.14■□□□□ 0.97
NR1H3-232ENST00000530310 CHRNA2Q15822 529 aa21.14■□□□□ 0.97
NR1H3-232ENST00000530310 NBPF8Q3BBV2 869 aa21.14■□□□□ 0.97
NR1H3-232ENST00000530310 POLR3AO14802 1390 aaPredicted RBP21.13■□□□□ 0.97
NR1H3-232ENST00000530310 TOPAZ1Q8N9V7 1692 aa21.12■□□□□ 0.97
NR1H3-232ENST00000530310 ZC3H6P61129 1189 aaKnown RBP21.12■□□□□ 0.97
NR1H3-232ENST00000530310 SRPK2P78362 688 aaKnown RBP21.12■□□□□ 0.97
NR1H3-232ENST00000530310 STRN4Q9NRL3 753 aa21.12■□□□□ 0.97
NR1H3-232ENST00000530310 PHRF1Q9P1Y6 1649 aaKnown RBP21.11■□□□□ 0.97
NR1H3-232ENST00000530310 CENPJQ9HC77 1338 aaPredicted RBP21.11■□□□□ 0.97
NR1H3-232ENST00000530310 PLEKHG3A1L390 1219 aa21.11■□□□□ 0.97
NR1H3-232ENST00000530310 BAG6P46379 1132 aa21.1■□□□□ 0.97
NR1H3-232ENST00000530310 FAM182BQ5T319 152 aa21.09■□□□□ 0.97
NR1H3-232ENST00000530310 ABTB2Q8N961 1025 aa21.09■□□□□ 0.97
NR1H3-232ENST00000530310 PPIP5K1Q6PFW1 1433 aa21.08■□□□□ 0.97
NR1H3-232ENST00000530310 CABP2Q9NPB3 220 aa21.08■□□□□ 0.97
NR1H3-232ENST00000530310 SPATA31A1Q5TZJ5 1347 aa21.07■□□□□ 0.96
NR1H3-232ENST00000530310 EVA1CP58658 441 aa21.06■□□□□ 0.96
NR1H3-232ENST00000530310 L3MBTL2Q969R5 705 aa21.06■□□□□ 0.96
NR1H3-232ENST00000530310 THSD7AQ9UPZ6 1657 aa21.05■□□□□ 0.96
NR1H3-232ENST00000530310 USP35Q9P2H5 1018 aa21.05■□□□□ 0.96
NR1H3-232ENST00000530310 NRKQ7Z2Y5 1582 aa21.04■□□□□ 0.96
NR1H3-232ENST00000530310 QRICH2Q9H0J4 1663 aa21.03■□□□□ 0.96
NR1H3-232ENST00000530310 NLRP13Q86W25 1043 aa21.03■□□□□ 0.96
NR1H3-232ENST00000530310 SIN3AQ96ST3 1273 aa21.03■□□□□ 0.96
NR1H3-232ENST00000530310 EN1Q05925 392 aaPredicted RBP21.02■□□□□ 0.96
NR1H3-232ENST00000530310 SSH2Q76I76 1423 aa21.02■□□□□ 0.96
NR1H3-232ENST00000530310 USP19O94966 1318 aa21.02■□□□□ 0.95
NR1H3-232ENST00000530310 NEUROD1Q13562 356 aa21.01■□□□□ 0.95
NR1H3-232ENST00000530310 CABP1Q9NZU7 370 aa21.01■□□□□ 0.95
NR1H3-232ENST00000530310 RGPD1P0DJD0 1748 aa21.01■□□□□ 0.95
NR1H3-232ENST00000530310 CPDO75976 1380 aa21■□□□□ 0.95
NR1H3-232ENST00000530310 PSDA5PKW4 1024 aaPredicted RBP21■□□□□ 0.95
NR1H3-232ENST00000530310 TIMELESSQ9UNS1 1208 aa21■□□□□ 0.95
NR1H3-232ENST00000530310 ZBTB7CA1YPR0 619 aa20.99■□□□□ 0.95
NR1H3-232ENST00000530310 GCP02774 474 aa20.99■□□□□ 0.95
NR1H3-232ENST00000530310 LARP1Q6PKG0 1096 aaKnown RBP20.99■□□□□ 0.95
NR1H3-232ENST00000530310 CAMTA1Q9Y6Y1 1673 aa20.99■□□□□ 0.95
NR1H3-232ENST00000530310 BRD4O60885 1362 aaPredicted RBP20.97■□□□□ 0.95
NR1H3-232ENST00000530310 TRIM37O94972 964 aa20.97■□□□□ 0.95
NR1H3-232ENST00000530310 PDE3BQ13370 1112 aa20.97■□□□□ 0.95
NR1H3-232ENST00000530310 FAM196AQ6ZSG2 479 aa20.97■□□□□ 0.95
NR1H3-232ENST00000530310 BARGINQ6ZT62 677 aa20.97■□□□□ 0.95
NR1H3-232ENST00000530310 EVC2Q86UK5 1308 aa20.97■□□□□ 0.95
NR1H3-232ENST00000530310 USP6P35125 1406 aa20.96■□□□□ 0.95
NR1H3-232ENST00000530310 NLRP6P59044 892 aa20.96■□□□□ 0.95
NR1H3-232ENST00000530310 TCP11L2Q8N4U5 519 aa20.96■□□□□ 0.95
NR1H3-232ENST00000530310 TRPM1Q7Z4N2 1603 aa20.96■□□□□ 0.95
NR1H3-232ENST00000530310 ROCK2O75116 1388 aaKnown RBP20.96■□□□□ 0.95
NR1H3-232ENST00000530310 LMO7Q8WWI1 1683 aa20.96■□□□□ 0.95
NR1H3-232ENST00000530310 EZH2Q15910 746 aaKnown RBP20.94■□□□□ 0.94
NR1H3-232ENST00000530310 TNS1Q9HBL0 1735 aaKnown RBP20.94■□□□□ 0.94
NR1H3-232ENST00000530310 DISP2A7MBM2 1401 aa20.94■□□□□ 0.94
NR1H3-232ENST00000530310 COL5A2P05997 1499 aaPredicted RBP20.92■□□□□ 0.94
NR1H3-232ENST00000530310 APBA3O96018 575 aa20.91■□□□□ 0.94
NR1H3-232ENST00000530310 R3HDM1Q15032 1099 aaKnown RBP20.91■□□□□ 0.94
NR1H3-232ENST00000530310 THRAP3Q9Y2W1 955 aaKnown RBP20.91■□□□□ 0.94
NR1H3-232ENST00000530310 LRP5O75197 1615 aa20.9■□□□□ 0.94
NR1H3-232ENST00000530310 SRCAPQ6ZRS2 3230 aa20.9■□□□□ 0.94
NR1H3-232ENST00000530310 SLIT3O75094 1523 aa20.89■□□□□ 0.94
NR1H3-232ENST00000530310 CAMKK2Q96RR4 588 aa20.89■□□□□ 0.93
NR1H3-232ENST00000530310 CRB1P82279 1406 aa20.88■□□□□ 0.93
NR1H3-232ENST00000530310 AATKQ6ZMQ8 1374 aa20.87■□□□□ 0.93
NR1H3-232ENST00000530310 PIK3C2AO00443 1686 aa20.87■□□□□ 0.93
NR1H3-232ENST00000530310 TTC21BQ7Z4L5 1316 aa20.86■□□□□ 0.93
NR1H3-232ENST00000530310 SOX12O15370 315 aa20.86■□□□□ 0.93
NR1H3-232ENST00000530310 TOM1L2Q6ZVM7 507 aa20.86■□□□□ 0.93
NR1H3-232ENST00000530310 ZNF692Q9BU19 519 aaPredicted RBP20.86■□□□□ 0.93
NR1H3-232ENST00000530310 PARD3Q8TEW0 1356 aa20.85■□□□□ 0.93
NR1H3-232ENST00000530310 KCNH5Q8NCM2 988 aa20.83■□□□□ 0.93
NR1H3-232ENST00000530310 PARP4Q9UKK3 1724 aaKnown RBP20.83■□□□□ 0.92
NR1H3-232ENST00000530310 TTC21AQ8NDW8 1320 aa20.82■□□□□ 0.92
NR1H3-232ENST00000530310 CPSF1Q10570 1443 aaKnown RBP20.82■□□□□ 0.92
NR1H3-232ENST00000530310 AXIN2Q9Y2T1 843 aa20.82■□□□□ 0.92
NR1H3-232ENST00000530310 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
NR1H3-232ENST00000530310 DDB1Q16531 1140 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms