RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 CCER1Q8TC90 406 aaPredicted RBP24.61■■□□□ 1.53
USP35-202ENST00000528910 ATAD2Q6PL18 1390 aa24.61■■□□□ 1.53
USP35-202ENST00000528910 BRD4O60885 1362 aaPredicted RBP24.59■■□□□ 1.53
USP35-202ENST00000528910 SLIT2O94813 1529 aa24.58■■□□□ 1.53
USP35-202ENST00000528910 USP6P35125 1406 aa24.58■■□□□ 1.53
USP35-202ENST00000528910 CDK12Q9NYV4 1490 aaPredicted RBP24.58■■□□□ 1.52
USP35-202ENST00000528910 FNBP4Q8N3X1 1017 aaPredicted RBP24.57■■□□□ 1.52
USP35-202ENST00000528910 USP47Q96K76 1375 aa24.56■■□□□ 1.52
USP35-202ENST00000528910 NRAPQ86VF7 1730 aa24.56■■□□□ 1.52
USP35-202ENST00000528910 NGLY1Q96IV0 654 aa24.56■■□□□ 1.52
USP35-202ENST00000528910 BCL9LQ86UU0 1499 aa24.56■■□□□ 1.52
USP35-202ENST00000528910 PIK3C2AO00443 1686 aa24.56■■□□□ 1.52
USP35-202ENST00000528910 COL14A1Q05707 1796 aaKnown RBP24.55■■□□□ 1.52
USP35-202ENST00000528910 SSH2Q76I76 1423 aa24.55■■□□□ 1.52
USP35-202ENST00000528910 LMOD2Q6P5Q4 547 aa24.55■■□□□ 1.52
USP35-202ENST00000528910 ATRNO75882 1429 aa24.54■■□□□ 1.52
USP35-202ENST00000528910 CABLES1Q8TDN4 633 aa24.54■■□□□ 1.52
USP35-202ENST00000528910 TESK2Q96S53 571 aa24.54■■□□□ 1.52
USP35-202ENST00000528910 CABP1Q9NZU7 370 aa24.53■■□□□ 1.52
USP35-202ENST00000528910 CPSF1Q10570 1443 aaKnown RBP24.52■■□□□ 1.52
USP35-202ENST00000528910 USP54Q70EL1 1684 aa24.51■■□□□ 1.51
USP35-202ENST00000528910 ST20-MTHFSA0A0A6YYL1 179 aa24.51■■□□□ 1.51
USP35-202ENST00000528910 PAK3O75914 559 aaPredicted RBP24.51■■□□□ 1.51
USP35-202ENST00000528910 CD163L1Q9NR16 1453 aa24.51■■□□□ 1.51
USP35-202ENST00000528910 PUS7Q96PZ0 661 aaKnown RBP24.5■■□□□ 1.51
USP35-202ENST00000528910 USP21Q9UK80 565 aa24.5■■□□□ 1.51
USP35-202ENST00000528910 HAP1P54257 671 aaPredicted RBP24.49■■□□□ 1.51
USP35-202ENST00000528910 SLIT3O75094 1523 aa24.48■■□□□ 1.51
USP35-202ENST00000528910 USP19O94966 1318 aa24.48■■□□□ 1.51
USP35-202ENST00000528910 RGS12O14924 1447 aa24.46■■□□□ 1.51
USP35-202ENST00000528910 SLC24A1O60721 1099 aa24.46■■□□□ 1.51
USP35-202ENST00000528910 RXRBP28702 533 aa24.46■■□□□ 1.51
USP35-202ENST00000528910 TRPC5Q9UL62 973 aaPredicted RBP24.46■■□□□ 1.51
USP35-202ENST00000528910 GLI3P10071 1580 aa24.46■■□□□ 1.51
USP35-202ENST00000528910 NINLQ9Y2I6 1382 aa24.45■■□□□ 1.5
USP35-202ENST00000528910 RBM6P78332 1123 aaKnown RBP24.45■■□□□ 1.5
USP35-202ENST00000528910 QTRT2Q9H974 415 aaKnown RBP24.45■■□□□ 1.5
USP35-202ENST00000528910 LMO7Q8WWI1 1683 aa24.44■■□□□ 1.5
USP35-202ENST00000528910 MYOM1P52179 1685 aa24.43■■□□□ 1.5
USP35-202ENST00000528910 PLEKHG5O94827 1062 aa24.43■■□□□ 1.5
USP35-202ENST00000528910 ABTB2Q8N961 1025 aa24.43■■□□□ 1.5
USP35-202ENST00000528910 ZNF692Q9BU19 519 aaPredicted RBP24.43■■□□□ 1.5
USP35-202ENST00000528910 UNC5CLQ8IV45 518 aa24.42■■□□□ 1.5
USP35-202ENST00000528910 KTN1Q86UP2 1357 aaKnown RBP24.42■■□□□ 1.5
USP35-202ENST00000528910 TTC21AQ8NDW8 1320 aa24.4■■□□□ 1.5
USP35-202ENST00000528910 FAM83GA6ND36 823 aa24.4■■□□□ 1.5
USP35-202ENST00000528910 CPDO75976 1380 aa24.4■■□□□ 1.5
USP35-202ENST00000528910 KIAA0232Q92628 1395 aa24.4■■□□□ 1.5
USP35-202ENST00000528910 TTC21BQ7Z4L5 1316 aa24.39■■□□□ 1.5
USP35-202ENST00000528910 NUTM2GQ5VZR2 741 aa24.39■■□□□ 1.49
USP35-202ENST00000528910 A0A1W2PP64 1363 aa24.39■■□□□ 1.49
USP35-202ENST00000528910 NLRP13Q86W25 1043 aa24.38■■□□□ 1.49
USP35-202ENST00000528910 EDC4Q6P2E9 1401 aaKnown RBP24.37■■□□□ 1.49
USP35-202ENST00000528910 TMF1P82094 1093 aa24.37■■□□□ 1.49
USP35-202ENST00000528910 NFAT5O94916 1531 aa24.35■■□□□ 1.49
USP35-202ENST00000528910 SLC12A5Q9H2X9 1139 aa24.35■■□□□ 1.49
USP35-202ENST00000528910 PRDM11Q9NQV5 511 aa24.35■■□□□ 1.49
USP35-202ENST00000528910 COL18A1P39060 1754 aa24.34■■□□□ 1.49
USP35-202ENST00000528910 VPS72Q15906 364 aa24.34■■□□□ 1.49
USP35-202ENST00000528910 TMC1Q8TDI8 760 aa24.34■■□□□ 1.49
USP35-202ENST00000528910 GJD4Q96KN9 370 aaPredicted RBP24.34■■□□□ 1.49
USP35-202ENST00000528910 USP31Q70CQ4 1352 aa24.33■■□□□ 1.49
USP35-202ENST00000528910 HDGFL2Q7Z4V5 671 aaPredicted RBP24.33■■□□□ 1.49
USP35-202ENST00000528910 BRWD3Q6RI45 1802 aa24.33■■□□□ 1.48
USP35-202ENST00000528910 ANKRD36BQ8N2N9 1353 aa24.32■■□□□ 1.48
USP35-202ENST00000528910 CAMTA1Q9Y6Y1 1673 aa24.32■■□□□ 1.48
USP35-202ENST00000528910 NLRP6P59044 892 aa24.32■■□□□ 1.48
USP35-202ENST00000528910 BTG4Q9NY30 223 aa24.32■■□□□ 1.48
USP35-202ENST00000528910 TERF2IPQ9NYB0 399 aa24.32■■□□□ 1.48
USP35-202ENST00000528910 ABCC6O95255 1503 aa24.31■■□□□ 1.48
USP35-202ENST00000528910 GCP02774 474 aa24.31■■□□□ 1.48
USP35-202ENST00000528910 CDCA8Q53HL2 280 aa24.3■■□□□ 1.48
USP35-202ENST00000528910 LTN1O94822 1766 aa24.29■■□□□ 1.48
USP35-202ENST00000528910 KIF20BQ96Q89 1820 aa24.29■■□□□ 1.48
USP35-202ENST00000528910 ZC3H6P61129 1189 aaKnown RBP24.29■■□□□ 1.48
USP35-202ENST00000528910 THSD7AQ9UPZ6 1657 aa24.29■■□□□ 1.48
USP35-202ENST00000528910 OVOS2A0A0J9YW53 1432 aa24.28■■□□□ 1.48
USP35-202ENST00000528910 OVOS2Q6IE36 1432 aa24.28■■□□□ 1.48
USP35-202ENST00000528910 CHRNA2Q15822 529 aa24.27■■□□□ 1.48
USP35-202ENST00000528910 RGPD5Q99666 1765 aa24.26■■□□□ 1.47
USP35-202ENST00000528910 COL5A2P05997 1499 aaPredicted RBP24.26■■□□□ 1.47
USP35-202ENST00000528910 EIF4G2P78344 907 aaKnown RBP eCLIP24.26■■□□□ 1.47
USP35-202ENST00000528910 AATKQ6ZMQ8 1374 aa24.25■■□□□ 1.47
USP35-202ENST00000528910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.24■■□□□ 1.47
USP35-202ENST00000528910 KCNH5Q8NCM2 988 aa24.24■■□□□ 1.47
USP35-202ENST00000528910 WNK3Q9BYP7 1800 aa24.24■■□□□ 1.47
USP35-202ENST00000528910 HSPA5P11021 654 aaKnown RBP24.23■■□□□ 1.47
USP35-202ENST00000528910 NME9Q86XW9 330 aa24.23■■□□□ 1.47
USP35-202ENST00000528910 SPATA31A5Q5VU36 1347 aa24.23■■□□□ 1.47
USP35-202ENST00000528910 SPATA31A7Q8IWB4 1347 aa24.23■■□□□ 1.47
USP35-202ENST00000528910 ONECUT3O60422 494 aaPredicted RBP24.21■■□□□ 1.47
USP35-202ENST00000528910 ZRANB1Q9UGI0 708 aa24.2■■□□□ 1.46
USP35-202ENST00000528910 CCDC9Q9Y3X0 531 aaKnown RBP24.2■■□□□ 1.46
USP35-202ENST00000528910 ARHGEF25Q86VW2 580 aa24.19■■□□□ 1.46
USP35-202ENST00000528910 SPATA31A1Q5TZJ5 1347 aa24.18■■□□□ 1.46
USP35-202ENST00000528910 UPF1Q92900 1129 aaKnown RBP eCLIP24.17■■□□□ 1.46
USP35-202ENST00000528910 PARP4Q9UKK3 1724 aaKnown RBP24.16■■□□□ 1.46
USP35-202ENST00000528910 STRN4Q9NRL3 753 aa24.16■■□□□ 1.46
USP35-202ENST00000528910 ANKRD26Q9UPS8 1709 aa24.15■■□□□ 1.46
USP35-202ENST00000528910 SEPT12Q8IYM1 358 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms