RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 XIRP1Q702N8 1843 aaKnown RBP10.69□□□□□ -0.7
ITGB1-218ENST00000528877 CLTCL1P53675 1640 aa10.69□□□□□ -0.7
ITGB1-218ENST00000528877 SETBP1Q9Y6X0 1596 aa10.68□□□□□ -0.7
ITGB1-218ENST00000528877 UBAP1LF5GYI3 381 aa10.67□□□□□ -0.7
ITGB1-218ENST00000528877 ADAMTS13Q76LX8 1427 aa10.67□□□□□ -0.7
ITGB1-218ENST00000528877 NRXN3Q9Y4C0 1643 aa10.66□□□□□ -0.7
ITGB1-218ENST00000528877 FOXK1P85037 733 aa10.66□□□□□ -0.7
ITGB1-218ENST00000528877 KRTAP3-3Q9BYR6 98 aa10.66□□□□□ -0.7
ITGB1-218ENST00000528877 KRTAP3-2Q9BYR7 98 aa10.66□□□□□ -0.7
ITGB1-218ENST00000528877 NEXMIFQ5QGS0 1516 aa10.66□□□□□ -0.7
ITGB1-218ENST00000528877 PIK3R4Q99570 1358 aa10.65□□□□□ -0.7
ITGB1-218ENST00000528877 CHD2O14647 1828 aaKnown RBP10.65□□□□□ -0.7
ITGB1-218ENST00000528877 PDE4AP27815 886 aa10.65□□□□□ -0.7
ITGB1-218ENST00000528877 EMP3P54852 163 aa10.65□□□□□ -0.7
ITGB1-218ENST00000528877 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.65□□□□□ -0.7
ITGB1-218ENST00000528877 TOM1O60784 492 aa10.64□□□□□ -0.71
ITGB1-218ENST00000528877 SLC34A2O95436 690 aa10.64□□□□□ -0.71
ITGB1-218ENST00000528877 KCNA6P17658 529 aa10.64□□□□□ -0.71
ITGB1-218ENST00000528877 HDGFP51858 240 aaKnown RBP10.64□□□□□ -0.71
ITGB1-218ENST00000528877 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
ITGB1-218ENST00000528877 NCOA3Q9Y6Q9 1424 aa10.64□□□□□ -0.71
ITGB1-218ENST00000528877 XRN1Q8IZH2 1706 aaKnown RBP10.64□□□□□ -0.71
ITGB1-218ENST00000528877 HOXB1P14653 301 aaPredicted RBP10.63□□□□□ -0.71
ITGB1-218ENST00000528877 TMEM94Q12767 1356 aa10.63□□□□□ -0.71
ITGB1-218ENST00000528877 ACIN1Q9UKV3 1341 aaKnown RBP10.62□□□□□ -0.71
ITGB1-218ENST00000528877 PRAG1Q86YV5 1406 aa10.62□□□□□ -0.71
ITGB1-218ENST00000528877 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
ITGB1-218ENST00000528877 TBX22Q9Y458 520 aa10.62□□□□□ -0.71
ITGB1-218ENST00000528877 KIF1BO60333 1816 aa10.62□□□□□ -0.71
ITGB1-218ENST00000528877 PPP1R15AO75807 674 aaPredicted RBP10.61□□□□□ -0.71
ITGB1-218ENST00000528877 SLC26A8Q96RN1 970 aa10.61□□□□□ -0.71
ITGB1-218ENST00000528877 CFAP44Q96MT7 982 aa10.6□□□□□ -0.71
ITGB1-218ENST00000528877 SETD1AO15047 1707 aaKnown RBP10.6□□□□□ -0.71
ITGB1-218ENST00000528877 FAM135BQ49AJ0 1406 aa10.59□□□□□ -0.71
ITGB1-218ENST00000528877 PLPP6Q8IY26 295 aa10.59□□□□□ -0.71
ITGB1-218ENST00000528877 DCCP43146 1447 aa10.58□□□□□ -0.72
ITGB1-218ENST00000528877 PPLO60437 1756 aa10.58□□□□□ -0.72
ITGB1-218ENST00000528877 DSG2Q14126 1118 aa10.58□□□□□ -0.72
ITGB1-218ENST00000528877 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.72
ITGB1-218ENST00000528877 IFT172Q9UG01 1749 aa10.58□□□□□ -0.72
ITGB1-218ENST00000528877 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
ITGB1-218ENST00000528877 SETD5Q9C0A6 1442 aa10.58□□□□□ -0.72
ITGB1-218ENST00000528877 MED1Q15648 1581 aaPredicted RBP10.57□□□□□ -0.72
ITGB1-218ENST00000528877 HSPA1LP34931 641 aa10.57□□□□□ -0.72
ITGB1-218ENST00000528877 PPP1R15BQ5SWA1 713 aa10.57□□□□□ -0.72
ITGB1-218ENST00000528877 PTCH1Q13635 1447 aa10.57□□□□□ -0.72
ITGB1-218ENST00000528877 SPATA31E1Q6ZUB1 1445 aa10.57□□□□□ -0.72
ITGB1-218ENST00000528877 ROBO1Q9Y6N7 1651 aa10.57□□□□□ -0.72
ITGB1-218ENST00000528877 MSH6P52701 1360 aa10.56□□□□□ -0.72
ITGB1-218ENST00000528877 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
ITGB1-218ENST00000528877 DDX27Q96GQ7 796 aaKnown RBP10.56□□□□□ -0.72
ITGB1-218ENST00000528877 CCDC144AA2RUR9 1427 aa10.56□□□□□ -0.72
ITGB1-218ENST00000528877 RPGRIP1LQ68CZ1 1315 aa10.56□□□□□ -0.72
ITGB1-218ENST00000528877 TBC1D12O60347 775 aa10.55□□□□□ -0.72
ITGB1-218ENST00000528877 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
ITGB1-218ENST00000528877 MFSD10Q14728 455 aa10.55□□□□□ -0.72
ITGB1-218ENST00000528877 PROSER2Q86WR7 435 aaPredicted RBP10.55□□□□□ -0.72
ITGB1-218ENST00000528877 TRIM52Q96A61 297 aa10.55□□□□□ -0.72
ITGB1-218ENST00000528877 LARP6Q9BRS8 491 aaKnown RBP10.55□□□□□ -0.72
ITGB1-218ENST00000528877 METP08581 1390 aa10.54□□□□□ -0.72
ITGB1-218ENST00000528877 PTCD2Q8WV60 388 aaKnown RBP10.54□□□□□ -0.72
ITGB1-218ENST00000528877 BCANQ96GW7 911 aa10.54□□□□□ -0.72
ITGB1-218ENST00000528877 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.54□□□□□ -0.72
ITGB1-218ENST00000528877 RAB3GAP2Q9H2M9 1393 aa10.53□□□□□ -0.72
ITGB1-218ENST00000528877 RNF166Q96A37 237 aaPredicted RBP10.53□□□□□ -0.72
ITGB1-218ENST00000528877 AHDC1Q5TGY3 1603 aaPredicted RBP10.53□□□□□ -0.72
ITGB1-218ENST00000528877 ADGRL3Q9HAR2 1447 aa10.52□□□□□ -0.73
ITGB1-218ENST00000528877 ZNF326Q5BKZ1 582 aaKnown RBP10.52□□□□□ -0.73
ITGB1-218ENST00000528877 NUTM2DQ5VT03 806 aaPredicted RBP10.52□□□□□ -0.73
ITGB1-218ENST00000528877 MPHOSPH9Q99550 1183 aa10.52□□□□□ -0.73
ITGB1-218ENST00000528877 PCDHGA4Q9Y5G9 962 aa10.52□□□□□ -0.73
ITGB1-218ENST00000528877 NRXN1Q9ULB1 1477 aa10.52□□□□□ -0.73
ITGB1-218ENST00000528877 NALCNQ8IZF0 1738 aa10.52□□□□□ -0.73
ITGB1-218ENST00000528877 PIK3C2GO75747 1445 aa10.51□□□□□ -0.73
ITGB1-218ENST00000528877 MYOM2P54296 1465 aa10.51□□□□□ -0.73
ITGB1-218ENST00000528877 FAM205CA6NFA0 338 aa10.51□□□□□ -0.73
ITGB1-218ENST00000528877 ARSIQ5FYB1 569 aa10.51□□□□□ -0.73
ITGB1-218ENST00000528877 ERBB3P21860 1342 aa10.51□□□□□ -0.73
ITGB1-218ENST00000528877 COL16A1Q07092 1604 aaPredicted RBP10.51□□□□□ -0.73
ITGB1-218ENST00000528877 ANKRD30BQ9BXX2 1392 aa10.51□□□□□ -0.73
ITGB1-218ENST00000528877 TECPR2O15040 1411 aa10.5□□□□□ -0.73
ITGB1-218ENST00000528877 AMOTL2Q9Y2J4 779 aa10.5□□□□□ -0.73
ITGB1-218ENST00000528877 LAMC1P11047 1609 aa10.5□□□□□ -0.73
ITGB1-218ENST00000528877 KNDC1Q76NI1 1749 aa10.5□□□□□ -0.73
ITGB1-218ENST00000528877 ASXL1Q8IXJ9 1541 aa10.49□□□□□ -0.73
ITGB1-218ENST00000528877 HRCP23327 699 aa10.49□□□□□ -0.73
ITGB1-218ENST00000528877 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
ITGB1-218ENST00000528877 C19orf44Q9H6X5 657 aa10.49□□□□□ -0.73
ITGB1-218ENST00000528877 MST1RQ04912 1400 aa10.49□□□□□ -0.73
ITGB1-218ENST00000528877 PHLPP1O60346 1717 aa10.48□□□□□ -0.73
ITGB1-218ENST00000528877 RBM33Q96EV2 1170 aaKnown RBP10.48□□□□□ -0.73
ITGB1-218ENST00000528877 SLAIN2Q9P270 581 aa10.48□□□□□ -0.73
ITGB1-218ENST00000528877 CDC42BPGQ6DT37 1551 aa10.48□□□□□ -0.73
ITGB1-218ENST00000528877 NHSL1Q5SYE7 1610 aa10.47□□□□□ -0.73
ITGB1-218ENST00000528877 POTEB3A0JP26 581 aa10.47□□□□□ -0.73
ITGB1-218ENST00000528877 PSDA5PKW4 1024 aaPredicted RBP10.47□□□□□ -0.73
ITGB1-218ENST00000528877 ZNF316A6NFI3 1004 aaPredicted RBP10.47□□□□□ -0.73
ITGB1-218ENST00000528877 POTEBQ6S5H4 581 aa10.47□□□□□ -0.73
ITGB1-218ENST00000528877 ROBO2Q9HCK4 1378 aa10.47□□□□□ -0.73
ITGB1-218ENST00000528877 OXER1Q8TDS5 423 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms