RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 NSD2O96028 1365 aa10.22□□□□□ -0.77
SOX6-211ENST00000528429 KNDC1Q76NI1 1749 aa10.22□□□□□ -0.77
SOX6-211ENST00000528429 SETD1BQ9UPS6 1966 aaKnown RBP10.21□□□□□ -0.77
SOX6-211ENST00000528429 IRX6P78412 446 aaPredicted RBP10.21□□□□□ -0.78
SOX6-211ENST00000528429 CFAP53Q96M91 514 aa10.2□□□□□ -0.78
SOX6-211ENST00000528429 PPM1GO15355 546 aaPredicted RBP10.2□□□□□ -0.78
SOX6-211ENST00000528429 ATP7BP35670 1465 aa10.2□□□□□ -0.78
SOX6-211ENST00000528429 FBLN1P23142 703 aa10.2□□□□□ -0.78
SOX6-211ENST00000528429 NME9Q86XW9 330 aa10.2□□□□□ -0.78
SOX6-211ENST00000528429 PMFBP1Q8TBY8 1022 aa10.2□□□□□ -0.78
SOX6-211ENST00000528429 BLMP54132 1417 aaPredicted RBP10.19□□□□□ -0.78
SOX6-211ENST00000528429 PTCH1Q13635 1447 aa10.19□□□□□ -0.78
SOX6-211ENST00000528429 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.19□□□□□ -0.78
SOX6-211ENST00000528429 USP32Q8NFA0 1604 aa10.19□□□□□ -0.78
SOX6-211ENST00000528429 DIP2AQ14689 1571 aa10.19□□□□□ -0.78
SOX6-211ENST00000528429 POLR3AO14802 1390 aaPredicted RBP10.19□□□□□ -0.78
SOX6-211ENST00000528429 ZRANB1Q9UGI0 708 aa10.19□□□□□ -0.78
SOX6-211ENST00000528429 NUDCQ9Y266 331 aa10.19□□□□□ -0.78
SOX6-211ENST00000528429 ACEP12821 1306 aa10.18□□□□□ -0.78
SOX6-211ENST00000528429 ZNF142P52746 1687 aaPredicted RBP10.18□□□□□ -0.78
SOX6-211ENST00000528429 NPHP4O75161 1426 aaPredicted RBP10.18□□□□□ -0.78
SOX6-211ENST00000528429 CDCA7LQ96GN5 454 aa10.18□□□□□ -0.78
SOX6-211ENST00000528429 CPSF1Q10570 1443 aaKnown RBP10.18□□□□□ -0.78
SOX6-211ENST00000528429 PIK3R4Q99570 1358 aa10.17□□□□□ -0.78
SOX6-211ENST00000528429 APAF1O14727 1248 aa10.17□□□□□ -0.78
SOX6-211ENST00000528429 HSPA2P54652 639 aa10.17□□□□□ -0.78
SOX6-211ENST00000528429 EDC4Q6P2E9 1401 aaKnown RBP10.17□□□□□ -0.78
SOX6-211ENST00000528429 SMG6Q86US8 1419 aaKnown RBP10.17□□□□□ -0.78
SOX6-211ENST00000528429 U2SURPO15042 1029 aaKnown RBP10.17□□□□□ -0.78
SOX6-211ENST00000528429 RBM10P98175 930 aaKnown RBP10.17□□□□□ -0.78
SOX6-211ENST00000528429 NGDNQ8NEJ9 315 aaKnown RBP10.17□□□□□ -0.78
SOX6-211ENST00000528429 U2AF1L5P0DN76 240 aaPredicted RBP10.16□□□□□ -0.78
SOX6-211ENST00000528429 U2AF1Q01081 240 aaKnown RBP eCLIP10.16□□□□□ -0.78
SOX6-211ENST00000528429 ZNF692Q9BU19 519 aaPredicted RBP10.16□□□□□ -0.78
SOX6-211ENST00000528429 DEKP35659 375 aaKnown RBP10.16□□□□□ -0.78
SOX6-211ENST00000528429 NEUROD2Q15784 382 aa10.16□□□□□ -0.78
SOX6-211ENST00000528429 COG3Q96JB2 828 aa10.16□□□□□ -0.78
SOX6-211ENST00000528429 SOX12O15370 315 aa10.15□□□□□ -0.78
SOX6-211ENST00000528429 INSRP06213 1382 aa10.15□□□□□ -0.78
SOX6-211ENST00000528429 CDC42BPGQ6DT37 1551 aa10.15□□□□□ -0.78
SOX6-211ENST00000528429 ADGRB2O60241 1585 aa10.15□□□□□ -0.78
SOX6-211ENST00000528429 XRN1Q8IZH2 1706 aaKnown RBP10.15□□□□□ -0.79
SOX6-211ENST00000528429 PLEKHG3A1L390 1219 aa10.14□□□□□ -0.79
SOX6-211ENST00000528429 RRP7AQ9Y3A4 280 aaKnown RBP10.14□□□□□ -0.79
SOX6-211ENST00000528429 NKTRP30414 1462 aaKnown RBP10.14□□□□□ -0.79
SOX6-211ENST00000528429 EMILIN1Q9Y6C2 1016 aa10.14□□□□□ -0.79
SOX6-211ENST00000528429 TTC21BQ7Z4L5 1316 aa10.14□□□□□ -0.79
SOX6-211ENST00000528429 PDE3BQ13370 1112 aa10.13□□□□□ -0.79
SOX6-211ENST00000528429 RRS1Q15050 365 aaKnown RBP10.13□□□□□ -0.79
SOX6-211ENST00000528429 POLKQ9UBT6 870 aa10.13□□□□□ -0.79
SOX6-211ENST00000528429 KDM4FA0A1W2PPD8 638 aa10.12□□□□□ -0.79
SOX6-211ENST00000528429 PROSER2Q86WR7 435 aaPredicted RBP10.12□□□□□ -0.79
SOX6-211ENST00000528429 USP6P35125 1406 aa10.12□□□□□ -0.79
SOX6-211ENST00000528429 DIAPH1O60610 1272 aaKnown RBP10.12□□□□□ -0.79
SOX6-211ENST00000528429 RUNDC1Q96C34 613 aa10.12□□□□□ -0.79
SOX6-211ENST00000528429 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
SOX6-211ENST00000528429 KIF20BQ96Q89 1820 aa10.11□□□□□ -0.79
SOX6-211ENST00000528429 GOLGA2Q08379 1002 aa10.11□□□□□ -0.79
SOX6-211ENST00000528429 TCP11L2Q8N4U5 519 aa10.11□□□□□ -0.79
SOX6-211ENST00000528429 ZMYND15Q9H091 742 aa10.11□□□□□ -0.79
SOX6-211ENST00000528429 NUTM2GQ5VZR2 741 aa10.1□□□□□ -0.79
SOX6-211ENST00000528429 ITSN1Q15811 1721 aa10.1□□□□□ -0.79
SOX6-211ENST00000528429 ESCO1Q5FWF5 840 aa10.1□□□□□ -0.79
SOX6-211ENST00000528429 ERICH6BQ5W0A0 696 aa10.1□□□□□ -0.79
SOX6-211ENST00000528429 RCAN3Q9UKA8 241 aa10.1□□□□□ -0.79
SOX6-211ENST00000528429 SHPRHQ149N8 1683 aa10.09□□□□□ -0.79
SOX6-211ENST00000528429 ANKRD26Q9UPS8 1709 aa10.09□□□□□ -0.79
SOX6-211ENST00000528429 CHD2O14647 1828 aaKnown RBP10.09□□□□□ -0.79
SOX6-211ENST00000528429 CNKSR2Q8WXI2 1034 aa10.09□□□□□ -0.79
SOX6-211ENST00000528429 TSHZ2Q9NRE2 1034 aa10.09□□□□□ -0.79
SOX6-211ENST00000528429 PHF8Q9UPP1 1060 aa10.09□□□□□ -0.79
SOX6-211ENST00000528429 MON2Q7Z3U7 1717 aa10.09□□□□□ -0.79
SOX6-211ENST00000528429 ANKARQ7Z5J8 1434 aa10.09□□□□□ -0.79
SOX6-211ENST00000528429 ADGRL3Q9HAR2 1447 aa10.09□□□□□ -0.79
SOX6-211ENST00000528429 TOPAZ1Q8N9V7 1692 aa10.08□□□□□ -0.8
SOX6-211ENST00000528429 ZNF521Q96K83 1311 aa10.08□□□□□ -0.8
SOX6-211ENST00000528429 MAPK8IP3Q9UPT6 1336 aa10.08□□□□□ -0.8
SOX6-211ENST00000528429 HMOX1P09601 288 aa10.08□□□□□ -0.8
SOX6-211ENST00000528429 RSPH6AQ9H0K4 717 aa10.08□□□□□ -0.8
SOX6-211ENST00000528429 FBXO3Q9UK99 471 aa10.08□□□□□ -0.8
SOX6-211ENST00000528429 DMRT2Q9Y5R5 561 aa10.08□□□□□ -0.8
SOX6-211ENST00000528429 NLRP6P59044 892 aa10.08□□□□□ -0.8
SOX6-211ENST00000528429 SPINK5Q9NQ38 1064 aaPredicted RBP10.08□□□□□ -0.8
SOX6-211ENST00000528429 AKAP12Q02952 1782 aa10.08□□□□□ -0.8
SOX6-211ENST00000528429 COL3A1P02461 1466 aaPredicted RBP10.07□□□□□ -0.8
SOX6-211ENST00000528429 RGPD8O14715 1765 aaPredicted RBP10.07□□□□□ -0.8
SOX6-211ENST00000528429 PNPLA6Q8IY17 1366 aa10.07□□□□□ -0.8
SOX6-211ENST00000528429 NALCNQ8IZF0 1738 aa10.07□□□□□ -0.8
SOX6-211ENST00000528429 TTC21AQ8NDW8 1320 aa10.07□□□□□ -0.8
SOX6-211ENST00000528429 DUSP27Q5VZP5 1158 aa10.07□□□□□ -0.8
SOX6-211ENST00000528429 WWC1Q8IX03 1113 aa10.07□□□□□ -0.8
SOX6-211ENST00000528429 XPCQ01831 940 aaPredicted RBP10.07□□□□□ -0.8
SOX6-211ENST00000528429 ABTB2Q8N961 1025 aa10.07□□□□□ -0.8
SOX6-211ENST00000528429 ORAI2Q96SN7 254 aa10.07□□□□□ -0.8
SOX6-211ENST00000528429 PSME1Q06323 249 aa10.06□□□□□ -0.8
SOX6-211ENST00000528429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.06□□□□□ -0.8
SOX6-211ENST00000528429 AATKQ6ZMQ8 1374 aa10.06□□□□□ -0.8
SOX6-211ENST00000528429 FOXO3O43524 673 aa10.06□□□□□ -0.8
SOX6-211ENST00000528429 PRKAR2BP31323 418 aa10.06□□□□□ -0.8
SOX6-211ENST00000528429 SLFN5Q08AF3 891 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms