RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 N4BP2Q86UW6 1770 aaPredicted RBP11.05□□□□□ -0.64
SORL1-207ENST00000528339 SBNO1A3KN83 1393 aa11.05□□□□□ -0.64
SORL1-207ENST00000528339 PLEKHG2Q9H7P9 1386 aa11.05□□□□□ -0.64
SORL1-207ENST00000528339 WAPLQ7Z5K2 1190 aa11.05□□□□□ -0.64
SORL1-207ENST00000528339 TMEM94Q12767 1356 aa11.04□□□□□ -0.64
SORL1-207ENST00000528339 USP19O94966 1318 aa11.04□□□□□ -0.64
SORL1-207ENST00000528339 GLI3P10071 1580 aa11.04□□□□□ -0.64
SORL1-207ENST00000528339 TRAK1Q9UPV9 953 aa11.04□□□□□ -0.64
SORL1-207ENST00000528339 NSD3Q9BZ95 1437 aa11.03□□□□□ -0.64
SORL1-207ENST00000528339 SLC26A8Q96RN1 970 aa11.02□□□□□ -0.65
SORL1-207ENST00000528339 KIF24Q5T7B8 1368 aa11.02□□□□□ -0.65
SORL1-207ENST00000528339 CDK19Q9BWU1 502 aa11.02□□□□□ -0.65
SORL1-207ENST00000528339 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
SORL1-207ENST00000528339 ZNF831Q5JPB2 1677 aa11.01□□□□□ -0.65
SORL1-207ENST00000528339 KDM3BQ7LBC6 1761 aa11□□□□□ -0.65
SORL1-207ENST00000528339 CCER2I3L3R5 266 aa11□□□□□ -0.65
SORL1-207ENST00000528339 UBR2Q8IWV8 1755 aa11□□□□□ -0.65
SORL1-207ENST00000528339 CHGAP10645 457 aaKnown RBP11□□□□□ -0.65
SORL1-207ENST00000528339 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
SORL1-207ENST00000528339 THSD7AQ9UPZ6 1657 aa10.99□□□□□ -0.65
SORL1-207ENST00000528339 SCN11AQ9UI33 1791 aa10.99□□□□□ -0.65
SORL1-207ENST00000528339 HSPA2P54652 639 aa10.99□□□□□ -0.65
SORL1-207ENST00000528339 ZNF335Q9H4Z2 1342 aaPredicted RBP10.98□□□□□ -0.65
SORL1-207ENST00000528339 DMRT2Q9Y5R5 561 aa10.97□□□□□ -0.65
SORL1-207ENST00000528339 TNS3Q68CZ2 1445 aa10.97□□□□□ -0.65
SORL1-207ENST00000528339 SOS2Q07890 1332 aaPredicted RBP10.97□□□□□ -0.65
SORL1-207ENST00000528339 HIRIP3Q9BW71 556 aaPredicted RBP10.97□□□□□ -0.65
SORL1-207ENST00000528339 TTC21AQ8NDW8 1320 aa10.97□□□□□ -0.65
SORL1-207ENST00000528339 TOGARAM1Q9Y4F4 1720 aa10.97□□□□□ -0.65
SORL1-207ENST00000528339 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
SORL1-207ENST00000528339 NUDT16Q96DE0 195 aaKnown RBP10.96□□□□□ -0.65
SORL1-207ENST00000528339 LRP6O75581 1613 aa10.96□□□□□ -0.65
SORL1-207ENST00000528339 RTL1A6NKG5 1358 aa10.96□□□□□ -0.66
SORL1-207ENST00000528339 CPDO75976 1380 aa10.95□□□□□ -0.66
SORL1-207ENST00000528339 CCDC61Q9Y6R9 512 aa10.95□□□□□ -0.66
SORL1-207ENST00000528339 RREB1Q92766 1687 aa10.95□□□□□ -0.66
SORL1-207ENST00000528339 C19orf44Q9H6X5 657 aa10.95□□□□□ -0.66
SORL1-207ENST00000528339 PANK3Q9H999 370 aa10.95□□□□□ -0.66
SORL1-207ENST00000528339 NCBP3Q53F19 620 aaKnown RBP10.94□□□□□ -0.66
SORL1-207ENST00000528339 CABP2Q9NPB3 220 aa10.94□□□□□ -0.66
SORL1-207ENST00000528339 FYB1O15117 783 aa10.93□□□□□ -0.66
SORL1-207ENST00000528339 SLC12A5Q9H2X9 1139 aa10.93□□□□□ -0.66
SORL1-207ENST00000528339 RALBP1Q15311 655 aa10.93□□□□□ -0.66
SORL1-207ENST00000528339 MINK1Q8N4C8 1332 aaPredicted RBP10.93□□□□□ -0.66
SORL1-207ENST00000528339 MRC1P22897 1456 aa10.92□□□□□ -0.66
SORL1-207ENST00000528339 DIEXFQ68CQ4 756 aaKnown RBP10.92□□□□□ -0.66
SORL1-207ENST00000528339 ZNF692Q9BU19 519 aaPredicted RBP10.92□□□□□ -0.66
SORL1-207ENST00000528339 ACEP12821 1306 aa10.92□□□□□ -0.66
SORL1-207ENST00000528339 MYBBP1AQ9BQG0 1328 aaKnown RBP10.92□□□□□ -0.66
SORL1-207ENST00000528339 KDRP35968 1356 aa10.92□□□□□ -0.66
SORL1-207ENST00000528339 TTC21BQ7Z4L5 1316 aa10.91□□□□□ -0.66
SORL1-207ENST00000528339 SBF2Q86WG5 1849 aa10.91□□□□□ -0.66
SORL1-207ENST00000528339 CGNL1Q0VF96 1302 aa10.91□□□□□ -0.66
SORL1-207ENST00000528339 MSH6P52701 1360 aa10.9□□□□□ -0.66
SORL1-207ENST00000528339 RGPD3A6NKT7 1758 aaPredicted RBP10.9□□□□□ -0.67
SORL1-207ENST00000528339 RGPD4Q7Z3J3 1758 aa10.9□□□□□ -0.67
SORL1-207ENST00000528339 PHF23Q9BUL5 403 aaPredicted RBP10.89□□□□□ -0.67
SORL1-207ENST00000528339 STK26Q9P289 416 aa10.89□□□□□ -0.67
SORL1-207ENST00000528339 LAMB4A4D0S4 1761 aa10.89□□□□□ -0.67
SORL1-207ENST00000528339 CABP1Q9NZU7 370 aa10.89□□□□□ -0.67
SORL1-207ENST00000528339 DDX10Q13206 875 aaKnown RBP10.88□□□□□ -0.67
SORL1-207ENST00000528339 BRINP3Q76B58 766 aa10.88□□□□□ -0.67
SORL1-207ENST00000528339 MIER1Q8N108 512 aa10.88□□□□□ -0.67
SORL1-207ENST00000528339 CCDC184Q52MB2 194 aa10.87□□□□□ -0.67
SORL1-207ENST00000528339 ITGB4P16144 1822 aa10.87□□□□□ -0.67
SORL1-207ENST00000528339 ZNF521Q96K83 1311 aa10.87□□□□□ -0.67
SORL1-207ENST00000528339 SLIT2O94813 1529 aa10.87□□□□□ -0.67
SORL1-207ENST00000528339 PPP2R1AP30153 589 aa10.86□□□□□ -0.67
SORL1-207ENST00000528339 PNISRQ8TF01 805 aaKnown RBP10.86□□□□□ -0.67
SORL1-207ENST00000528339 DISP2A7MBM2 1401 aa10.86□□□□□ -0.67
SORL1-207ENST00000528339 SPATA31A3Q5VYP0 1347 aa10.86□□□□□ -0.67
SORL1-207ENST00000528339 OVOS2A0A0G2JMS6 1433 aa10.85□□□□□ -0.67
SORL1-207ENST00000528339 POGKQ9P215 609 aa10.85□□□□□ -0.67
SORL1-207ENST00000528339 CADPS2Q86UW7 1296 aa10.84□□□□□ -0.67
SORL1-207ENST00000528339 COL5A3P25940 1745 aaPredicted RBP10.84□□□□□ -0.67
SORL1-207ENST00000528339 TERF2IPQ9NYB0 399 aa10.84□□□□□ -0.67
SORL1-207ENST00000528339 COL5A2P05997 1499 aaPredicted RBP10.83□□□□□ -0.67
SORL1-207ENST00000528339 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
SORL1-207ENST00000528339 ARHGEF10O15013 1369 aa10.83□□□□□ -0.68
SORL1-207ENST00000528339 PLEKHF1Q96S99 279 aa10.83□□□□□ -0.68
SORL1-207ENST00000528339 C5P01031 1676 aa10.83□□□□□ -0.68
SORL1-207ENST00000528339 LY75O60449 1722 aa10.83□□□□□ -0.68
SORL1-207ENST00000528339 CACNA1FO60840 1977 aa10.82□□□□□ -0.68
SORL1-207ENST00000528339 COL24A1Q17RW2 1714 aa10.82□□□□□ -0.68
SORL1-207ENST00000528339 NHSQ6T4R5 1651 aa10.82□□□□□ -0.68
SORL1-207ENST00000528339 BRWD3Q6RI45 1802 aa10.81□□□□□ -0.68
SORL1-207ENST00000528339 ORAI2Q96SN7 254 aa10.81□□□□□ -0.68
SORL1-207ENST00000528339 NLRP13Q86W25 1043 aa10.81□□□□□ -0.68
SORL1-207ENST00000528339 PROSER2Q86WR7 435 aaPredicted RBP10.81□□□□□ -0.68
SORL1-207ENST00000528339 POLKQ9UBT6 870 aa10.81□□□□□ -0.68
SORL1-207ENST00000528339 QSER1Q2KHR3 1735 aa10.8□□□□□ -0.68
SORL1-207ENST00000528339 TJP1Q07157 1748 aa10.8□□□□□ -0.68
SORL1-207ENST00000528339 SLAIN2Q9P270 581 aa10.79□□□□□ -0.68
SORL1-207ENST00000528339 IL13P35225 146 aa10.79□□□□□ -0.68
SORL1-207ENST00000528339 TNS1Q9HBL0 1735 aaKnown RBP10.79□□□□□ -0.68
SORL1-207ENST00000528339 SRPK2P78362 688 aaKnown RBP10.78□□□□□ -0.68
SORL1-207ENST00000528339 NME9Q86XW9 330 aa10.78□□□□□ -0.68
SORL1-207ENST00000528339 IGSF1Q8N6C5 1336 aa10.78□□□□□ -0.68
SORL1-207ENST00000528339 NUP188Q5SRE5 1749 aa10.78□□□□□ -0.68
SORL1-207ENST00000528339 DOT1LQ8TEK3 1739 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms