RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 RSPH4AQ5TD94 716 aa8.75□□□□□ -1.01
CHKA-204ENST00000528235 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
CHKA-204ENST00000528235 ERVK-7P63135 1459 aa8.75□□□□□ -1.01
CHKA-204ENST00000528235 SLIT1O75093 1534 aa8.75□□□□□ -1.01
CHKA-204ENST00000528235 TMEM94Q12767 1356 aa8.74□□□□□ -1.01
CHKA-204ENST00000528235 PIK3C2BO00750 1634 aa8.74□□□□□ -1.01
CHKA-204ENST00000528235 EIF2AK4Q9P2K8 1649 aaKnown RBP8.74□□□□□ -1.01
CHKA-204ENST00000528235 TSPY4P0CV99 314 aa8.74□□□□□ -1.01
CHKA-204ENST00000528235 TSPY10P0CW01 314 aa8.74□□□□□ -1.01
CHKA-204ENST00000528235 LTKP29376 864 aa8.74□□□□□ -1.01
CHKA-204ENST00000528235 ZDHHC16Q969W1 377 aa8.74□□□□□ -1.01
CHKA-204ENST00000528235 SLC4A5Q9BY07 1137 aa8.74□□□□□ -1.01
CHKA-204ENST00000528235 ABCC3O15438 1527 aa8.74□□□□□ -1.01
CHKA-204ENST00000528235 RXRBP28702 533 aa8.73□□□□□ -1.01
CHKA-204ENST00000528235 BBXQ8WY36 941 aaPredicted RBP8.73□□□□□ -1.01
CHKA-204ENST00000528235 VPS9D1Q9Y2B5 631 aa8.73□□□□□ -1.01
CHKA-204ENST00000528235 EHBP1L1Q8N3D4 1523 aa8.73□□□□□ -1.01
CHKA-204ENST00000528235 CHD2O14647 1828 aaKnown RBP8.73□□□□□ -1.01
CHKA-204ENST00000528235 MSH6P52701 1360 aa8.73□□□□□ -1.01
CHKA-204ENST00000528235 COL16A1Q07092 1604 aaPredicted RBP8.72□□□□□ -1.01
CHKA-204ENST00000528235 SHPRHQ149N8 1683 aa8.72□□□□□ -1.01
CHKA-204ENST00000528235 CAMSAP2Q08AD1 1489 aa8.72□□□□□ -1.01
CHKA-204ENST00000528235 ARHGAP23Q9P227 1491 aa8.72□□□□□ -1.01
CHKA-204ENST00000528235 KCNA6P17658 529 aa8.72□□□□□ -1.01
CHKA-204ENST00000528235 RBM33Q96EV2 1170 aaKnown RBP8.72□□□□□ -1.01
CHKA-204ENST00000528235 KDM5AP29375 1690 aaKnown RBP8.72□□□□□ -1.01
CHKA-204ENST00000528235 NCOA2Q15596 1464 aa8.71□□□□□ -1.01
CHKA-204ENST00000528235 MAP3K1Q13233 1512 aa8.71□□□□□ -1.01
CHKA-204ENST00000528235 ARHGEF5Q12774 1597 aa8.71□□□□□ -1.02
CHKA-204ENST00000528235 KCTD12Q96CX2 325 aaKnown RBP8.71□□□□□ -1.02
CHKA-204ENST00000528235 BCANQ96GW7 911 aa8.71□□□□□ -1.02
CHKA-204ENST00000528235 SLAIN2Q9P270 581 aa8.71□□□□□ -1.02
CHKA-204ENST00000528235 SPATA31A6Q5VVP1 1343 aa8.71□□□□□ -1.02
CHKA-204ENST00000528235 PRDM15P57071 1507 aaPredicted RBP8.7□□□□□ -1.02
CHKA-204ENST00000528235 CADPS2Q86UW7 1296 aa8.7□□□□□ -1.02
CHKA-204ENST00000528235 EMILIN3Q9NT22 766 aa8.7□□□□□ -1.02
CHKA-204ENST00000528235 PLA2G2EQ9NZK7 142 aa8.7□□□□□ -1.02
CHKA-204ENST00000528235 MYO5BQ9ULV0 1848 aa8.7□□□□□ -1.02
CHKA-204ENST00000528235 SLC26A8Q96RN1 970 aa8.69□□□□□ -1.02
CHKA-204ENST00000528235 NKTRP30414 1462 aaKnown RBP8.69□□□□□ -1.02
CHKA-204ENST00000528235 LRP6O75581 1613 aa8.69□□□□□ -1.02
CHKA-204ENST00000528235 ZBED2Q9BTP6 218 aa8.68□□□□□ -1.02
CHKA-204ENST00000528235 ADAM33Q9BZ11 813 aa8.68□□□□□ -1.02
CHKA-204ENST00000528235 TMEM2Q9UHN6 1383 aa8.68□□□□□ -1.02
CHKA-204ENST00000528235 CEP162Q5TB80 1403 aa8.68□□□□□ -1.02
CHKA-204ENST00000528235 FGD6Q6ZV73 1430 aa8.68□□□□□ -1.02
CHKA-204ENST00000528235 CDK12Q9NYV4 1490 aaPredicted RBP8.68□□□□□ -1.02
CHKA-204ENST00000528235 EFCAB6Q5THR3 1501 aa8.68□□□□□ -1.02
CHKA-204ENST00000528235 NWD1Q149M9 1564 aa8.68□□□□□ -1.02
CHKA-204ENST00000528235 MROH1Q8NDA8 1641 aa8.68□□□□□ -1.02
CHKA-204ENST00000528235 GOLGA8CPA6NN73 597 aa8.67□□□□□ -1.02
CHKA-204ENST00000528235 TET3O43151 1660 aa8.67□□□□□ -1.02
CHKA-204ENST00000528235 AMER1Q5JTC6 1135 aaPredicted RBP8.67□□□□□ -1.02
CHKA-204ENST00000528235 C14orf37Q86TY3 774 aa8.67□□□□□ -1.02
CHKA-204ENST00000528235 FBXW7Q969H0 707 aa8.67□□□□□ -1.02
CHKA-204ENST00000528235 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.67□□□□□ -1.02
CHKA-204ENST00000528235 MAST1Q9Y2H9 1570 aa8.67□□□□□ -1.02
CHKA-204ENST00000528235 NUTM2BA6NNL0 878 aaPredicted RBP8.66□□□□□ -1.02
CHKA-204ENST00000528235 NUTM2EB1AL46 878 aaPredicted RBP8.66□□□□□ -1.02
CHKA-204ENST00000528235 NUTM2DQ5VT03 806 aaPredicted RBP8.66□□□□□ -1.02
CHKA-204ENST00000528235 NUTM2AQ8IVF1 878 aaPredicted RBP8.66□□□□□ -1.02
CHKA-204ENST00000528235 MRPL50Q8N5N7 158 aaKnown RBP8.66□□□□□ -1.02
CHKA-204ENST00000528235 NBPF3Q9H094 633 aa8.66□□□□□ -1.02
CHKA-204ENST00000528235 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.66□□□□□ -1.02
CHKA-204ENST00000528235 BHMG1C9JSJ3 638 aaPredicted RBP8.65□□□□□ -1.02
CHKA-204ENST00000528235 PHF14O94880 888 aa8.65□□□□□ -1.02
CHKA-204ENST00000528235 CAMK2BQ13554 666 aa8.65□□□□□ -1.02
CHKA-204ENST00000528235 SPRYD3Q8NCJ5 442 aa8.65□□□□□ -1.02
CHKA-204ENST00000528235 PCDHGA10Q9Y5H3 936 aa8.65□□□□□ -1.02
CHKA-204ENST00000528235 AHDC1Q5TGY3 1603 aaPredicted RBP8.65□□□□□ -1.03
CHKA-204ENST00000528235 AFF2P51816 1311 aa8.64□□□□□ -1.03
CHKA-204ENST00000528235 PPP1R3GB7ZBB8 358 aa8.64□□□□□ -1.03
CHKA-204ENST00000528235 TYW1BQ6NUM6 668 aa8.64□□□□□ -1.03
CHKA-204ENST00000528235 DUOX2Q9NRD8 1548 aa8.64□□□□□ -1.03
CHKA-204ENST00000528235 ARHGAP31Q2M1Z3 1444 aa8.63□□□□□ -1.03
CHKA-204ENST00000528235 GCC2Q8IWJ2 1684 aa8.62□□□□□ -1.03
CHKA-204ENST00000528235 KANK1Q14678 1352 aa8.62□□□□□ -1.03
CHKA-204ENST00000528235 ATF3P18847 181 aa8.62□□□□□ -1.03
CHKA-204ENST00000528235 PTPN5P54829 565 aa8.62□□□□□ -1.03
CHKA-204ENST00000528235 RBM6P78332 1123 aaKnown RBP8.62□□□□□ -1.03
CHKA-204ENST00000528235 EPAS1Q99814 870 aa8.62□□□□□ -1.03
CHKA-204ENST00000528235 QTRT2Q9H974 415 aaKnown RBP8.62□□□□□ -1.03
CHKA-204ENST00000528235 ADGRB3O60242 1522 aa8.61□□□□□ -1.03
CHKA-204ENST00000528235 DPYSL4O14531 572 aa8.61□□□□□ -1.03
CHKA-204ENST00000528235 PPP1R15AO75807 674 aaPredicted RBP8.61□□□□□ -1.03
CHKA-204ENST00000528235 IDI1Q13907 227 aa8.61□□□□□ -1.03
CHKA-204ENST00000528235 WNT2BQ93097 391 aa8.61□□□□□ -1.03
CHKA-204ENST00000528235 NGLY1Q96IV0 654 aa8.61□□□□□ -1.03
CHKA-204ENST00000528235 CROCC2H7BZ55 1655 aa8.61□□□□□ -1.03
CHKA-204ENST00000528235 RGS12O14924 1447 aa8.61□□□□□ -1.03
CHKA-204ENST00000528235 DIP2AQ14689 1571 aa8.61□□□□□ -1.03
CHKA-204ENST00000528235 ATAD2Q6PL18 1390 aa8.61□□□□□ -1.03
CHKA-204ENST00000528235 HDGFP51858 240 aaKnown RBP8.6□□□□□ -1.03
CHKA-204ENST00000528235 THSD4Q6ZMP0 1018 aa8.6□□□□□ -1.03
CHKA-204ENST00000528235 ERICH6Q7L0X2 663 aa8.6□□□□□ -1.03
CHKA-204ENST00000528235 C8orf37Q96NL8 207 aa8.6□□□□□ -1.03
CHKA-204ENST00000528235 NHSL1Q5SYE7 1610 aa8.6□□□□□ -1.03
CHKA-204ENST00000528235 NCOA3Q9Y6Q9 1424 aa8.6□□□□□ -1.03
CHKA-204ENST00000528235 SRCAPQ6ZRS2 3230 aa8.59□□□□□ -1.03
CHKA-204ENST00000528235 C19orf44Q9H6X5 657 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms