RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ATRNO75882 1429 aa22.11■■□□□ 1.13
CAPN1-213ENST00000527897 EVC2Q86UK5 1308 aa22.1■■□□□ 1.13
CAPN1-213ENST00000527897 NUTM2GQ5VZR2 741 aa22.1■■□□□ 1.13
CAPN1-213ENST00000527897 PLEKHG3A1L390 1219 aa22.09■■□□□ 1.13
CAPN1-213ENST00000527897 POLR3AO14802 1390 aaPredicted RBP22.09■■□□□ 1.13
CAPN1-213ENST00000527897 PLCH1Q4KWH8 1693 aa22.08■■□□□ 1.13
CAPN1-213ENST00000527897 UNC5CLQ8IV45 518 aa22.08■■□□□ 1.13
CAPN1-213ENST00000527897 SLIT2O94813 1529 aa22.07■■□□□ 1.12
CAPN1-213ENST00000527897 CABP1Q9NZU7 370 aa22.07■■□□□ 1.12
CAPN1-213ENST00000527897 RALGAPBQ86X10 1494 aa22.07■■□□□ 1.12
CAPN1-213ENST00000527897 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.06■■□□□ 1.12
CAPN1-213ENST00000527897 FAM83GA6ND36 823 aa22.06■■□□□ 1.12
CAPN1-213ENST00000527897 CCDC9Q9Y3X0 531 aaKnown RBP22.06■■□□□ 1.12
CAPN1-213ENST00000527897 GJD4Q96KN9 370 aaPredicted RBP22.05■■□□□ 1.12
CAPN1-213ENST00000527897 ABTB2Q8N961 1025 aa22.04■■□□□ 1.12
CAPN1-213ENST00000527897 NWD2Q9ULI1 1742 aa22.03■■□□□ 1.12
CAPN1-213ENST00000527897 CRYBG1Q9Y4K1 1723 aa22.03■■□□□ 1.12
CAPN1-213ENST00000527897 UPF1Q92900 1129 aaKnown RBP eCLIP22.01■■□□□ 1.11
CAPN1-213ENST00000527897 PRDM11Q9NQV5 511 aa22.01■■□□□ 1.11
CAPN1-213ENST00000527897 BTG4Q9NY30 223 aa22.01■■□□□ 1.11
CAPN1-213ENST00000527897 PHRF1Q9P1Y6 1649 aaKnown RBP22.01■■□□□ 1.11
CAPN1-213ENST00000527897 ZC3H6P61129 1189 aaKnown RBP22■■□□□ 1.11
CAPN1-213ENST00000527897 COL14A1Q05707 1796 aaKnown RBP21.99■■□□□ 1.11
CAPN1-213ENST00000527897 GLI3P10071 1580 aa21.99■■□□□ 1.11
CAPN1-213ENST00000527897 CHRNA2Q15822 529 aa21.98■■□□□ 1.11
CAPN1-213ENST00000527897 VPS72Q15906 364 aa21.97■■□□□ 1.11
CAPN1-213ENST00000527897 ATAD2Q6PL18 1390 aa21.97■■□□□ 1.11
CAPN1-213ENST00000527897 KIAA0232Q92628 1395 aa21.97■■□□□ 1.11
CAPN1-213ENST00000527897 USP6P35125 1406 aa21.97■■□□□ 1.11
CAPN1-213ENST00000527897 A0A0G2JS52 829 aa21.96■■□□□ 1.11
CAPN1-213ENST00000527897 MYT1Q01538 1121 aa21.96■■□□□ 1.11
CAPN1-213ENST00000527897 NRAPQ86VF7 1730 aa21.95■■□□□ 1.1
CAPN1-213ENST00000527897 NLRP13Q86W25 1043 aa21.95■■□□□ 1.1
CAPN1-213ENST00000527897 SBNO2Q9Y2G9 1366 aa21.95■■□□□ 1.1
CAPN1-213ENST00000527897 TMC1Q8TDI8 760 aa21.94■■□□□ 1.1
CAPN1-213ENST00000527897 ZBTB7CA1YPR0 619 aa21.93■■□□□ 1.1
CAPN1-213ENST00000527897 NLRP6P59044 892 aa21.93■■□□□ 1.1
CAPN1-213ENST00000527897 STRN4Q9NRL3 753 aa21.93■■□□□ 1.1
CAPN1-213ENST00000527897 NRKQ7Z2Y5 1582 aa21.92■■□□□ 1.1
CAPN1-213ENST00000527897 BRD4O60885 1362 aaPredicted RBP21.92■■□□□ 1.1
CAPN1-213ENST00000527897 ST20-MTHFSA0A0A6YYL1 179 aa21.92■■□□□ 1.1
CAPN1-213ENST00000527897 AKAP12Q02952 1782 aa21.92■■□□□ 1.1
CAPN1-213ENST00000527897 SEPT12Q8IYM1 358 aa21.91■■□□□ 1.1
CAPN1-213ENST00000527897 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
CAPN1-213ENST00000527897 ZNF692Q9BU19 519 aaPredicted RBP21.91■■□□□ 1.1
CAPN1-213ENST00000527897 KTN1Q86UP2 1357 aaKnown RBP21.9■■□□□ 1.1
CAPN1-213ENST00000527897 EP400Q96L91 3159 aa21.9■■□□□ 1.1
CAPN1-213ENST00000527897 USP19O94966 1318 aa21.9■■□□□ 1.1
CAPN1-213ENST00000527897 GCP02774 474 aa21.9■■□□□ 1.1
CAPN1-213ENST00000527897 BRWD3Q6RI45 1802 aa21.9■■□□□ 1.1
CAPN1-213ENST00000527897 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.1
CAPN1-213ENST00000527897 FAM98CQ17RN3 349 aaKnown RBP21.89■■□□□ 1.09
CAPN1-213ENST00000527897 PIK3C2AO00443 1686 aa21.88■■□□□ 1.09
CAPN1-213ENST00000527897 TTC21BQ7Z4L5 1316 aa21.88■■□□□ 1.09
CAPN1-213ENST00000527897 EVA1CP58658 441 aa21.88■■□□□ 1.09
CAPN1-213ENST00000527897 SOX12O15370 315 aa21.87■■□□□ 1.09
CAPN1-213ENST00000527897 SSH2Q76I76 1423 aa21.87■■□□□ 1.09
CAPN1-213ENST00000527897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.86■■□□□ 1.09
CAPN1-213ENST00000527897 SLC12A5Q9H2X9 1139 aa21.86■■□□□ 1.09
CAPN1-213ENST00000527897 USP47Q96K76 1375 aa21.86■■□□□ 1.09
CAPN1-213ENST00000527897 TESK2Q96S53 571 aa21.85■■□□□ 1.09
CAPN1-213ENST00000527897 USP35Q9P2H5 1018 aa21.85■■□□□ 1.09
CAPN1-213ENST00000527897 CPSF1Q10570 1443 aaKnown RBP21.85■■□□□ 1.09
CAPN1-213ENST00000527897 SPATA31A5Q5VU36 1347 aa21.84■■□□□ 1.09
CAPN1-213ENST00000527897 SPATA31A7Q8IWB4 1347 aa21.84■■□□□ 1.09
CAPN1-213ENST00000527897 MON2Q7Z3U7 1717 aa21.84■■□□□ 1.09
CAPN1-213ENST00000527897 HDGFL2Q7Z4V5 671 aaPredicted RBP21.84■■□□□ 1.09
CAPN1-213ENST00000527897 CPDO75976 1380 aa21.84■■□□□ 1.09
CAPN1-213ENST00000527897 TTC21AQ8NDW8 1320 aa21.83■■□□□ 1.09
CAPN1-213ENST00000527897 TIMELESSQ9UNS1 1208 aa21.83■■□□□ 1.09
CAPN1-213ENST00000527897 ONECUT3O60422 494 aaPredicted RBP21.82■■□□□ 1.08
CAPN1-213ENST00000527897 KRT27Q7Z3Y8 459 aa21.82■■□□□ 1.08
CAPN1-213ENST00000527897 CAMTA1Q9Y6Y1 1673 aa21.82■■□□□ 1.08
CAPN1-213ENST00000527897 SLIT3O75094 1523 aa21.81■■□□□ 1.08
CAPN1-213ENST00000527897 TERF2IPQ9NYB0 399 aa21.81■■□□□ 1.08
CAPN1-213ENST00000527897 CD163L1Q9NR16 1453 aa21.8■■□□□ 1.08
CAPN1-213ENST00000527897 LARP1Q6PKG0 1096 aaKnown RBP21.8■■□□□ 1.08
CAPN1-213ENST00000527897 ZRANB1Q9UGI0 708 aa21.8■■□□□ 1.08
CAPN1-213ENST00000527897 SPATA31A1Q5TZJ5 1347 aa21.8■■□□□ 1.08
CAPN1-213ENST00000527897 LMO7Q8WWI1 1683 aa21.79■■□□□ 1.08
CAPN1-213ENST00000527897 SLC24A1O60721 1099 aa21.79■■□□□ 1.08
CAPN1-213ENST00000527897 A0A1W2PP64 1363 aa21.78■■□□□ 1.08
CAPN1-213ENST00000527897 TMF1P82094 1093 aa21.78■■□□□ 1.08
CAPN1-213ENST00000527897 NME9Q86XW9 330 aa21.78■■□□□ 1.08
CAPN1-213ENST00000527897 KCNH5Q8NCM2 988 aa21.78■■□□□ 1.08
CAPN1-213ENST00000527897 PUS7Q96PZ0 661 aaKnown RBP21.78■■□□□ 1.08
CAPN1-213ENST00000527897 EDC4Q6P2E9 1401 aaKnown RBP21.75■■□□□ 1.07
CAPN1-213ENST00000527897 FAM182BQ5T319 152 aa21.75■■□□□ 1.07
CAPN1-213ENST00000527897 COL5A2P05997 1499 aaPredicted RBP21.75■■□□□ 1.07
CAPN1-213ENST00000527897 AATKQ6ZMQ8 1374 aa21.74■■□□□ 1.07
CAPN1-213ENST00000527897 CCDC125Q86Z20 511 aa21.74■■□□□ 1.07
CAPN1-213ENST00000527897 THSD7AQ9UPZ6 1657 aa21.73■■□□□ 1.07
CAPN1-213ENST00000527897 SF3B2Q13435 895 aaKnown RBP21.73■■□□□ 1.07
CAPN1-213ENST00000527897 NINLQ9Y2I6 1382 aa21.73■■□□□ 1.07
CAPN1-213ENST00000527897 RGPD5Q99666 1765 aa21.72■■□□□ 1.07
CAPN1-213ENST00000527897 ARHGEF25Q86VW2 580 aa21.72■■□□□ 1.07
CAPN1-213ENST00000527897 TCP11L2Q8N4U5 519 aa21.72■■□□□ 1.07
CAPN1-213ENST00000527897 BLMP54132 1417 aaPredicted RBP21.72■■□□□ 1.07
CAPN1-213ENST00000527897 TOM1L2Q6ZVM7 507 aa21.71■■□□□ 1.07
CAPN1-213ENST00000527897 AXIN2Q9Y2T1 843 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms