RNA–Protein interactions for RNA: ENST00000527875.1

FOXRED1-208, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-208ENST00000527875 NRKQ7Z2Y5 1582 aa23.88■■□□□ 1.41
FOXRED1-208ENST00000527875 HDGFL2Q7Z4V5 671 aaPredicted RBP23.88■■□□□ 1.41
FOXRED1-208ENST00000527875 A0A1W2PP64 1363 aa23.88■■□□□ 1.41
FOXRED1-208ENST00000527875 PNPLA6Q8IY17 1366 aa23.88■■□□□ 1.41
FOXRED1-208ENST00000527875 COL22A1Q8NFW1 1626 aaPredicted RBP23.86■■□□□ 1.41
FOXRED1-208ENST00000527875 LMOD2Q6P5Q4 547 aa23.86■■□□□ 1.41
FOXRED1-208ENST00000527875 BRD4O60885 1362 aaPredicted RBP23.85■■□□□ 1.41
FOXRED1-208ENST00000527875 ANKRD36BQ8N2N9 1353 aa23.85■■□□□ 1.41
FOXRED1-208ENST00000527875 SSH2Q76I76 1423 aa23.84■■□□□ 1.41
FOXRED1-208ENST00000527875 CCDC7Q96M83 1385 aa23.84■■□□□ 1.41
FOXRED1-208ENST00000527875 ARHGEF10O15013 1369 aa23.83■■□□□ 1.41
FOXRED1-208ENST00000527875 WASHC2AQ641Q2 1341 aa23.83■■□□□ 1.4
FOXRED1-208ENST00000527875 EDC4Q6P2E9 1401 aaKnown RBP23.82■■□□□ 1.4
FOXRED1-208ENST00000527875 TTC21BQ7Z4L5 1316 aa23.82■■□□□ 1.4
FOXRED1-208ENST00000527875 PIK3C2AO00443 1686 aa23.81■■□□□ 1.4
FOXRED1-208ENST00000527875 ABCA3Q99758 1704 aa23.8■■□□□ 1.4
FOXRED1-208ENST00000527875 SPATA31A6Q5VVP1 1343 aa23.8■■□□□ 1.4
FOXRED1-208ENST00000527875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.79■■□□□ 1.4
FOXRED1-208ENST00000527875 ABTB2Q8N961 1025 aa23.79■■□□□ 1.4
FOXRED1-208ENST00000527875 CRYBG1Q9Y4K1 1723 aa23.79■■□□□ 1.4
FOXRED1-208ENST00000527875 PLEKHG5O94827 1062 aa23.78■■□□□ 1.4
FOXRED1-208ENST00000527875 NUTM2GQ5VZR2 741 aa23.78■■□□□ 1.4
FOXRED1-208ENST00000527875 TTC21AQ8NDW8 1320 aa23.78■■□□□ 1.4
FOXRED1-208ENST00000527875 NUTM2BA6NNL0 878 aaPredicted RBP23.77■■□□□ 1.4
FOXRED1-208ENST00000527875 NUTM2EB1AL46 878 aaPredicted RBP23.77■■□□□ 1.4
FOXRED1-208ENST00000527875 NUTM2AQ8IVF1 878 aaPredicted RBP23.77■■□□□ 1.4
FOXRED1-208ENST00000527875 MED1Q15648 1581 aaPredicted RBP23.77■■□□□ 1.4
FOXRED1-208ENST00000527875 LRP6O75581 1613 aa23.75■■□□□ 1.39
FOXRED1-208ENST00000527875 PHRF1Q9P1Y6 1649 aaKnown RBP23.75■■□□□ 1.39
FOXRED1-208ENST00000527875 CABLES1Q8TDN4 633 aa23.75■■□□□ 1.39
FOXRED1-208ENST00000527875 CARD14Q9BXL6 1004 aa23.75■■□□□ 1.39
FOXRED1-208ENST00000527875 PANK3Q9H999 370 aa23.75■■□□□ 1.39
FOXRED1-208ENST00000527875 MARF1Q9Y4F3 1742 aaKnown RBP23.75■■□□□ 1.39
FOXRED1-208ENST00000527875 KIF20BQ96Q89 1820 aa23.75■■□□□ 1.39
FOXRED1-208ENST00000527875 NSD3Q9BZ95 1437 aa23.74■■□□□ 1.39
FOXRED1-208ENST00000527875 NLRP6P59044 892 aa23.72■■□□□ 1.39
FOXRED1-208ENST00000527875 NLRP13Q86W25 1043 aa23.72■■□□□ 1.39
FOXRED1-208ENST00000527875 NME9Q86XW9 330 aa23.72■■□□□ 1.39
FOXRED1-208ENST00000527875 USP54Q70EL1 1684 aa23.72■■□□□ 1.39
FOXRED1-208ENST00000527875 HAP1P54257 671 aaPredicted RBP23.71■■□□□ 1.39
FOXRED1-208ENST00000527875 ZRANB1Q9UGI0 708 aa23.7■■□□□ 1.38
FOXRED1-208ENST00000527875 USP19O94966 1318 aa23.69■■□□□ 1.38
FOXRED1-208ENST00000527875 ADAMTS2O95450 1211 aa23.68■■□□□ 1.38
FOXRED1-208ENST00000527875 USP31Q70CQ4 1352 aa23.67■■□□□ 1.38
FOXRED1-208ENST00000527875 SLIT3O75094 1523 aa23.67■■□□□ 1.38
FOXRED1-208ENST00000527875 MEX3CQ5U5Q3 659 aaKnown RBP23.66■■□□□ 1.38
FOXRED1-208ENST00000527875 FYB1O15117 783 aa23.65■■□□□ 1.38
FOXRED1-208ENST00000527875 OVOS2A0A0J9YW53 1432 aa23.65■■□□□ 1.38
FOXRED1-208ENST00000527875 OVOS2Q6IE36 1432 aa23.65■■□□□ 1.38
FOXRED1-208ENST00000527875 CGNL1Q0VF96 1302 aa23.64■■□□□ 1.38
FOXRED1-208ENST00000527875 SOCS7O14512 581 aa23.64■■□□□ 1.37
FOXRED1-208ENST00000527875 ILDR2Q71H61 639 aa23.64■■□□□ 1.37
FOXRED1-208ENST00000527875 GGNBP2Q9H3C7 697 aa23.64■■□□□ 1.37
FOXRED1-208ENST00000527875 GCP02774 474 aa23.63■■□□□ 1.37
FOXRED1-208ENST00000527875 ANKRD26Q9UPS8 1709 aa23.63■■□□□ 1.37
FOXRED1-208ENST00000527875 COG3Q96JB2 828 aa23.62■■□□□ 1.37
FOXRED1-208ENST00000527875 KNSTRNQ9Y448 316 aa23.62■■□□□ 1.37
FOXRED1-208ENST00000527875 ZNF316A6NFI3 1004 aaPredicted RBP23.61■■□□□ 1.37
FOXRED1-208ENST00000527875 C8orf37Q96NL8 207 aa23.61■■□□□ 1.37
FOXRED1-208ENST00000527875 NFAT5O94916 1531 aa23.6■■□□□ 1.37
FOXRED1-208ENST00000527875 SOX12O15370 315 aa23.6■■□□□ 1.37
FOXRED1-208ENST00000527875 ZC3H6P61129 1189 aaKnown RBP23.6■■□□□ 1.37
FOXRED1-208ENST00000527875 PER1O15534 1290 aaPredicted RBP23.59■■□□□ 1.37
FOXRED1-208ENST00000527875 KCNH5Q8NCM2 988 aa23.59■■□□□ 1.37
FOXRED1-208ENST00000527875 PLCH1Q4KWH8 1693 aa23.59■■□□□ 1.37
FOXRED1-208ENST00000527875 COL14A1Q05707 1796 aaKnown RBP23.58■■□□□ 1.37
FOXRED1-208ENST00000527875 KIAA0232Q92628 1395 aa23.58■■□□□ 1.37
FOXRED1-208ENST00000527875 LTN1O94822 1766 aa23.57■■□□□ 1.36
FOXRED1-208ENST00000527875 NGLY1Q96IV0 654 aa23.57■■□□□ 1.36
FOXRED1-208ENST00000527875 PRDM11Q9NQV5 511 aa23.56■■□□□ 1.36
FOXRED1-208ENST00000527875 CPDO75976 1380 aa23.55■■□□□ 1.36
FOXRED1-208ENST00000527875 FAM83GA6ND36 823 aa23.55■■□□□ 1.36
FOXRED1-208ENST00000527875 DDX10Q13206 875 aaKnown RBP23.55■■□□□ 1.36
FOXRED1-208ENST00000527875 AMER1Q5JTC6 1135 aaPredicted RBP23.55■■□□□ 1.36
FOXRED1-208ENST00000527875 NSD2O96028 1365 aa23.54■■□□□ 1.36
FOXRED1-208ENST00000527875 NWD2Q9ULI1 1742 aa23.54■■□□□ 1.36
FOXRED1-208ENST00000527875 ZBTB7CA1YPR0 619 aa23.54■■□□□ 1.36
FOXRED1-208ENST00000527875 CHRNA2Q15822 529 aa23.54■■□□□ 1.36
FOXRED1-208ENST00000527875 PHF23Q9BUL5 403 aaPredicted RBP23.54■■□□□ 1.36
FOXRED1-208ENST00000527875 AFF2P51816 1311 aa23.54■■□□□ 1.36
FOXRED1-208ENST00000527875 SLIT2O94813 1529 aa23.52■■□□□ 1.36
FOXRED1-208ENST00000527875 COL18A1P39060 1754 aa23.52■■□□□ 1.36
FOXRED1-208ENST00000527875 LMO7Q8WWI1 1683 aa23.51■■□□□ 1.35
FOXRED1-208ENST00000527875 RGPD5Q99666 1765 aa23.51■■□□□ 1.35
FOXRED1-208ENST00000527875 FBLN1P23142 703 aa23.51■■□□□ 1.35
FOXRED1-208ENST00000527875 ARHGEF25Q86VW2 580 aa23.51■■□□□ 1.35
FOXRED1-208ENST00000527875 FNBP4Q8N3X1 1017 aaPredicted RBP23.51■■□□□ 1.35
FOXRED1-208ENST00000527875 MAP2P11137 1827 aaKnown RBP23.5■■□□□ 1.35
FOXRED1-208ENST00000527875 NRAPQ86VF7 1730 aa23.5■■□□□ 1.35
FOXRED1-208ENST00000527875 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
FOXRED1-208ENST00000527875 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.49■■□□□ 1.35
FOXRED1-208ENST00000527875 CNGB1Q14028 1251 aaPredicted RBP23.48■■□□□ 1.35
FOXRED1-208ENST00000527875 MORC1Q86VD1 984 aa23.48■■□□□ 1.35
FOXRED1-208ENST00000527875 BTG4Q9NY30 223 aa23.48■■□□□ 1.35
FOXRED1-208ENST00000527875 USP21Q9UK80 565 aa23.48■■□□□ 1.35
FOXRED1-208ENST00000527875 NPC1L1Q9UHC9 1359 aa23.48■■□□□ 1.35
FOXRED1-208ENST00000527875 BCL9LQ86UU0 1499 aa23.48■■□□□ 1.35
FOXRED1-208ENST00000527875 RGS17Q9UGC6 210 aaPredicted RBP23.47■■□□□ 1.35
FOXRED1-208ENST00000527875 AATKQ6ZMQ8 1374 aa23.47■■□□□ 1.35
FOXRED1-208ENST00000527875 CAMTA1Q9Y6Y1 1673 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms