RNA–Protein interactions for RNA: ENST00000527765.1

SYVN1-209, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 516 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-209ENST00000527765 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
SYVN1-209ENST00000527765 CABP2Q9NPB3 220 aa18.4■□□□□ 0.54
SYVN1-209ENST00000527765 POLR3AO14802 1390 aaPredicted RBP18.4■□□□□ 0.54
SYVN1-209ENST00000527765 ABTB2Q8N961 1025 aa18.38■□□□□ 0.53
SYVN1-209ENST00000527765 PRDM11Q9NQV5 511 aa18.38■□□□□ 0.53
SYVN1-209ENST00000527765 BTG4Q9NY30 223 aa18.38■□□□□ 0.53
SYVN1-209ENST00000527765 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
SYVN1-209ENST00000527765 PPIP5K1Q6PFW1 1433 aa18.37■□□□□ 0.53
SYVN1-209ENST00000527765 TRPM3Q9HCF6 1732 aaPredicted RBP18.37■□□□□ 0.53
SYVN1-209ENST00000527765 CCDC125Q86Z20 511 aa18.36■□□□□ 0.53
SYVN1-209ENST00000527765 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.36■□□□□ 0.53
SYVN1-209ENST00000527765 ALS2Q96Q42 1657 aa18.35■□□□□ 0.53
SYVN1-209ENST00000527765 BRD4O60885 1362 aaPredicted RBP18.35■□□□□ 0.53
SYVN1-209ENST00000527765 A0A0G2JS52 829 aa18.35■□□□□ 0.53
SYVN1-209ENST00000527765 MYT1Q01538 1121 aa18.35■□□□□ 0.53
SYVN1-209ENST00000527765 NUTM2GQ5VZR2 741 aa18.35■□□□□ 0.53
SYVN1-209ENST00000527765 CARD11Q9BXL7 1154 aa18.35■□□□□ 0.53
SYVN1-209ENST00000527765 CABP1Q9NZU7 370 aa18.35■□□□□ 0.53
SYVN1-209ENST00000527765 NLRP13Q86W25 1043 aa18.34■□□□□ 0.53
SYVN1-209ENST00000527765 TRPM1Q7Z4N2 1603 aa18.34■□□□□ 0.53
SYVN1-209ENST00000527765 NWD2Q9ULI1 1742 aa18.33■□□□□ 0.52
SYVN1-209ENST00000527765 SEPT12Q8IYM1 358 aa18.33■□□□□ 0.52
SYVN1-209ENST00000527765 QRICH2Q9H0J4 1663 aa18.33■□□□□ 0.52
SYVN1-209ENST00000527765 ZC3H6P61129 1189 aaKnown RBP18.32■□□□□ 0.52
SYVN1-209ENST00000527765 ABCA3Q99758 1704 aa18.32■□□□□ 0.52
SYVN1-209ENST00000527765 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
SYVN1-209ENST00000527765 ZNF692Q9BU19 519 aaPredicted RBP18.31■□□□□ 0.52
SYVN1-209ENST00000527765 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
SYVN1-209ENST00000527765 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
SYVN1-209ENST00000527765 KIAA0232Q92628 1395 aa18.3■□□□□ 0.52
SYVN1-209ENST00000527765 COL14A1Q05707 1796 aaKnown RBP18.3■□□□□ 0.52
SYVN1-209ENST00000527765 EVA1CP58658 441 aa18.3■□□□□ 0.52
SYVN1-209ENST00000527765 EP400Q96L91 3159 aa18.3■□□□□ 0.52
SYVN1-209ENST00000527765 GLI3P10071 1580 aa18.29■□□□□ 0.52
SYVN1-209ENST00000527765 NLRP6P59044 892 aa18.28■□□□□ 0.52
SYVN1-209ENST00000527765 SF3B2Q13435 895 aaKnown RBP18.28■□□□□ 0.52
SYVN1-209ENST00000527765 CHRNA2Q15822 529 aa18.28■□□□□ 0.52
SYVN1-209ENST00000527765 FAM98CQ17RN3 349 aaKnown RBP18.28■□□□□ 0.52
SYVN1-209ENST00000527765 KRT27Q7Z3Y8 459 aa18.28■□□□□ 0.52
SYVN1-209ENST00000527765 STRN4Q9NRL3 753 aa18.28■□□□□ 0.52
SYVN1-209ENST00000527765 SLC24A1O60721 1099 aa18.27■□□□□ 0.52
SYVN1-209ENST00000527765 SPATA31A5Q5VU36 1347 aa18.26■□□□□ 0.51
SYVN1-209ENST00000527765 SPATA31A7Q8IWB4 1347 aa18.26■□□□□ 0.51
SYVN1-209ENST00000527765 USP6P35125 1406 aa18.26■□□□□ 0.51
SYVN1-209ENST00000527765 GCP02774 474 aa18.26■□□□□ 0.51
SYVN1-209ENST00000527765 USP19O94966 1318 aa18.25■□□□□ 0.51
SYVN1-209ENST00000527765 SBNO2Q9Y2G9 1366 aa18.25■□□□□ 0.51
SYVN1-209ENST00000527765 CPDO75976 1380 aa18.24■□□□□ 0.51
SYVN1-209ENST00000527765 ZBTB7CA1YPR0 619 aa18.22■□□□□ 0.51
SYVN1-209ENST00000527765 TMC1Q8TDI8 760 aa18.22■□□□□ 0.51
SYVN1-209ENST00000527765 BLMP54132 1417 aaPredicted RBP18.22■□□□□ 0.51
SYVN1-209ENST00000527765 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
SYVN1-209ENST00000527765 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
SYVN1-209ENST00000527765 KTN1Q86UP2 1357 aaKnown RBP18.21■□□□□ 0.51
SYVN1-209ENST00000527765 KCNH5Q8NCM2 988 aa18.21■□□□□ 0.51
SYVN1-209ENST00000527765 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
SYVN1-209ENST00000527765 CRYBG1Q9Y4K1 1723 aa18.2■□□□□ 0.5
SYVN1-209ENST00000527765 PHRF1Q9P1Y6 1649 aaKnown RBP18.2■□□□□ 0.5
SYVN1-209ENST00000527765 HDGFL2Q7Z4V5 671 aaPredicted RBP18.2■□□□□ 0.5
SYVN1-209ENST00000527765 USP35Q9P2H5 1018 aa18.2■□□□□ 0.5
SYVN1-209ENST00000527765 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
SYVN1-209ENST00000527765 TTC21BQ7Z4L5 1316 aa18.2■□□□□ 0.5
SYVN1-209ENST00000527765 TERF2IPQ9NYB0 399 aa18.19■□□□□ 0.5
SYVN1-209ENST00000527765 PUS7Q96PZ0 661 aaKnown RBP18.18■□□□□ 0.5
SYVN1-209ENST00000527765 PCGF6Q9BYE7 350 aa18.18■□□□□ 0.5
SYVN1-209ENST00000527765 NRKQ7Z2Y5 1582 aa18.17■□□□□ 0.5
SYVN1-209ENST00000527765 SSH2Q76I76 1423 aa18.17■□□□□ 0.5
SYVN1-209ENST00000527765 TIMELESSQ9UNS1 1208 aa18.17■□□□□ 0.5
SYVN1-209ENST00000527765 THRAP3Q9Y2W1 955 aaKnown RBP18.17■□□□□ 0.5
SYVN1-209ENST00000527765 PDE3BQ13370 1112 aa18.16■□□□□ 0.5
SYVN1-209ENST00000527765 LARP1Q6PKG0 1096 aaKnown RBP18.16■□□□□ 0.5
SYVN1-209ENST00000527765 BARGINQ6ZT62 677 aa18.16■□□□□ 0.5
SYVN1-209ENST00000527765 TCP11L2Q8N4U5 519 aa18.16■□□□□ 0.5
SYVN1-209ENST00000527765 AATKQ6ZMQ8 1374 aa18.16■□□□□ 0.5
SYVN1-209ENST00000527765 CPSF1Q10570 1443 aaKnown RBP18.15■□□□□ 0.5
SYVN1-209ENST00000527765 ST20-MTHFSA0A0A6YYL1 179 aa18.15■□□□□ 0.5
SYVN1-209ENST00000527765 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
SYVN1-209ENST00000527765 CLSPNQ9HAW4 1339 aa18.15■□□□□ 0.5
SYVN1-209ENST00000527765 BRWD3Q6RI45 1802 aa18.14■□□□□ 0.5
SYVN1-209ENST00000527765 SOX12O15370 315 aa18.14■□□□□ 0.49
SYVN1-209ENST00000527765 BAG6P46379 1132 aa18.14■□□□□ 0.49
SYVN1-209ENST00000527765 CAMTA1Q9Y6Y1 1673 aa18.13■□□□□ 0.49
SYVN1-209ENST00000527765 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
SYVN1-209ENST00000527765 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
SYVN1-209ENST00000527765 TOM1L2Q6ZVM7 507 aa18.11■□□□□ 0.49
SYVN1-209ENST00000527765 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
SYVN1-209ENST00000527765 ARHGEF25Q86VW2 580 aa18.11■□□□□ 0.49
SYVN1-209ENST00000527765 NINLQ9Y2I6 1382 aa18.11■□□□□ 0.49
SYVN1-209ENST00000527765 SLIT3O75094 1523 aa18.11■□□□□ 0.49
SYVN1-209ENST00000527765 COL5A2P05997 1499 aaPredicted RBP18.1■□□□□ 0.49
SYVN1-209ENST00000527765 CRB1P82279 1406 aa18.1■□□□□ 0.49
SYVN1-209ENST00000527765 CSB-PGBD3P0DP91 1061 aa18.1■□□□□ 0.49
SYVN1-209ENST00000527765 TMF1P82094 1093 aa18.1■□□□□ 0.49
SYVN1-209ENST00000527765 FAM182BQ5T319 152 aa18.1■□□□□ 0.49
SYVN1-209ENST00000527765 PIK3C2AO00443 1686 aa18.09■□□□□ 0.49
SYVN1-209ENST00000527765 C11orf95C9JLR9 678 aaPredicted RBP18.09■□□□□ 0.49
SYVN1-209ENST00000527765 CDCA8Q53HL2 280 aa18.09■□□□□ 0.49
SYVN1-209ENST00000527765 TESK2Q96S53 571 aa18.09■□□□□ 0.49
SYVN1-209ENST00000527765 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
SYVN1-209ENST00000527765 LMO7Q8WWI1 1683 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms