RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 TRPC5Q9UL62 973 aaPredicted RBP24.21■■□□□ 1.47
CCS-203ENST00000526058 ATRNO75882 1429 aa24.2■■□□□ 1.46
CCS-203ENST00000526058 EVC2Q86UK5 1308 aa24.2■■□□□ 1.46
CCS-203ENST00000526058 CDK12Q9NYV4 1490 aaPredicted RBP24.19■■□□□ 1.46
CCS-203ENST00000526058 SLIT2O94813 1529 aa24.19■■□□□ 1.46
CCS-203ENST00000526058 CRYBG1Q9Y4K1 1723 aa24.18■■□□□ 1.46
CCS-203ENST00000526058 CABP1Q9NZU7 370 aa24.18■■□□□ 1.46
CCS-203ENST00000526058 RGS12O14924 1447 aa24.17■■□□□ 1.46
CCS-203ENST00000526058 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.16■■□□□ 1.46
CCS-203ENST00000526058 PLCH1Q4KWH8 1693 aa24.15■■□□□ 1.46
CCS-203ENST00000526058 NUTM2GQ5VZR2 741 aa24.15■■□□□ 1.46
CCS-203ENST00000526058 UNC5CLQ8IV45 518 aa24.15■■□□□ 1.46
CCS-203ENST00000526058 FAM83GA6ND36 823 aa24.14■■□□□ 1.45
CCS-203ENST00000526058 SBNO2Q9Y2G9 1366 aa24.12■■□□□ 1.45
CCS-203ENST00000526058 NWD2Q9ULI1 1742 aa24.12■■□□□ 1.45
CCS-203ENST00000526058 GJD4Q96KN9 370 aaPredicted RBP24.11■■□□□ 1.45
CCS-203ENST00000526058 PHRF1Q9P1Y6 1649 aaKnown RBP24.1■■□□□ 1.45
CCS-203ENST00000526058 ABTB2Q8N961 1025 aa24.1■■□□□ 1.45
CCS-203ENST00000526058 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
CCS-203ENST00000526058 USP6P35125 1406 aa24.09■■□□□ 1.45
CCS-203ENST00000526058 COL14A1Q05707 1796 aaKnown RBP24.08■■□□□ 1.44
CCS-203ENST00000526058 GLI3P10071 1580 aa24.08■■□□□ 1.44
CCS-203ENST00000526058 BTG4Q9NY30 223 aa24.06■■□□□ 1.44
CCS-203ENST00000526058 NRAPQ86VF7 1730 aa24.06■■□□□ 1.44
CCS-203ENST00000526058 AKAP12Q02952 1782 aa24.06■■□□□ 1.44
CCS-203ENST00000526058 ATAD2Q6PL18 1390 aa24.05■■□□□ 1.44
CCS-203ENST00000526058 ST20-MTHFSA0A0A6YYL1 179 aa24.05■■□□□ 1.44
CCS-203ENST00000526058 VPS72Q15906 364 aa24.05■■□□□ 1.44
CCS-203ENST00000526058 UPF1Q92900 1129 aaKnown RBP eCLIP24.05■■□□□ 1.44
CCS-203ENST00000526058 BRD4O60885 1362 aaPredicted RBP24.04■■□□□ 1.44
CCS-203ENST00000526058 SSH2Q76I76 1423 aa24.04■■□□□ 1.44
CCS-203ENST00000526058 ZC3H6P61129 1189 aaKnown RBP24.04■■□□□ 1.44
CCS-203ENST00000526058 PRDM11Q9NQV5 511 aa24.04■■□□□ 1.44
CCS-203ENST00000526058 KIAA0232Q92628 1395 aa24.03■■□□□ 1.44
CCS-203ENST00000526058 TIMELESSQ9UNS1 1208 aa24.03■■□□□ 1.44
CCS-203ENST00000526058 CHRNA2Q15822 529 aa24.02■■□□□ 1.44
CCS-203ENST00000526058 NLRP13Q86W25 1043 aa24.02■■□□□ 1.44
CCS-203ENST00000526058 CCER1Q8TC90 406 aaPredicted RBP24.02■■□□□ 1.44
CCS-203ENST00000526058 TESK2Q96S53 571 aa24.02■■□□□ 1.44
CCS-203ENST00000526058 CCDC9Q9Y3X0 531 aaKnown RBP24.02■■□□□ 1.44
CCS-203ENST00000526058 NRKQ7Z2Y5 1582 aa24.02■■□□□ 1.44
CCS-203ENST00000526058 USP19O94966 1318 aa24.02■■□□□ 1.44
CCS-203ENST00000526058 ZNF692Q9BU19 519 aaPredicted RBP24.01■■□□□ 1.43
CCS-203ENST00000526058 CPSF1Q10570 1443 aaKnown RBP24.01■■□□□ 1.43
CCS-203ENST00000526058 PIK3C2AO00443 1686 aa24■■□□□ 1.43
CCS-203ENST00000526058 NLRP6P59044 892 aa23.99■■□□□ 1.43
CCS-203ENST00000526058 TTC21BQ7Z4L5 1316 aa23.99■■□□□ 1.43
CCS-203ENST00000526058 TMC1Q8TDI8 760 aa23.98■■□□□ 1.43
CCS-203ENST00000526058 USP47Q96K76 1375 aa23.98■■□□□ 1.43
CCS-203ENST00000526058 EP400Q96L91 3159 aa23.98■■□□□ 1.43
CCS-203ENST00000526058 GCP02774 474 aa23.97■■□□□ 1.43
CCS-203ENST00000526058 MON2Q7Z3U7 1717 aa23.97■■□□□ 1.43
CCS-203ENST00000526058 KTN1Q86UP2 1357 aaKnown RBP23.97■■□□□ 1.43
CCS-203ENST00000526058 SLC12A5Q9H2X9 1139 aa23.97■■□□□ 1.43
CCS-203ENST00000526058 BRWD3Q6RI45 1802 aa23.96■■□□□ 1.43
CCS-203ENST00000526058 CD163L1Q9NR16 1453 aa23.96■■□□□ 1.43
CCS-203ENST00000526058 CPDO75976 1380 aa23.94■■□□□ 1.42
CCS-203ENST00000526058 ONECUT3O60422 494 aaPredicted RBP23.94■■□□□ 1.42
CCS-203ENST00000526058 SEPT12Q8IYM1 358 aa23.94■■□□□ 1.42
CCS-203ENST00000526058 PUS7Q96PZ0 661 aaKnown RBP23.94■■□□□ 1.42
CCS-203ENST00000526058 SLIT3O75094 1523 aa23.93■■□□□ 1.42
CCS-203ENST00000526058 SPATA31A5Q5VU36 1347 aa23.92■■□□□ 1.42
CCS-203ENST00000526058 SPATA31A7Q8IWB4 1347 aa23.92■■□□□ 1.42
CCS-203ENST00000526058 TTC21AQ8NDW8 1320 aa23.92■■□□□ 1.42
CCS-203ENST00000526058 STRN4Q9NRL3 753 aa23.92■■□□□ 1.42
CCS-203ENST00000526058 FAM98CQ17RN3 349 aaKnown RBP23.91■■□□□ 1.42
CCS-203ENST00000526058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.91■■□□□ 1.42
CCS-203ENST00000526058 LMO7Q8WWI1 1683 aa23.91■■□□□ 1.42
CCS-203ENST00000526058 CAMTA1Q9Y6Y1 1673 aa23.91■■□□□ 1.42
CCS-203ENST00000526058 ZBTB7CA1YPR0 619 aa23.89■■□□□ 1.41
CCS-203ENST00000526058 SLC24A1O60721 1099 aa23.89■■□□□ 1.41
CCS-203ENST00000526058 HDGFL2Q7Z4V5 671 aaPredicted RBP23.89■■□□□ 1.41
CCS-203ENST00000526058 ZRANB1Q9UGI0 708 aa23.88■■□□□ 1.41
CCS-203ENST00000526058 A0A1W2PP64 1363 aa23.88■■□□□ 1.41
CCS-203ENST00000526058 A0A0G2JS52 829 aa23.87■■□□□ 1.41
CCS-203ENST00000526058 EVA1CP58658 441 aa23.87■■□□□ 1.41
CCS-203ENST00000526058 MYT1Q01538 1121 aa23.87■■□□□ 1.41
CCS-203ENST00000526058 TERF2IPQ9NYB0 399 aa23.87■■□□□ 1.41
CCS-203ENST00000526058 SPATA31A1Q5TZJ5 1347 aa23.86■■□□□ 1.41
CCS-203ENST00000526058 SOX12O15370 315 aa23.86■■□□□ 1.41
CCS-203ENST00000526058 TMF1P82094 1093 aa23.86■■□□□ 1.41
CCS-203ENST00000526058 NME9Q86XW9 330 aa23.86■■□□□ 1.41
CCS-203ENST00000526058 COL18A1P39060 1754 aa23.84■■□□□ 1.41
CCS-203ENST00000526058 LARP1Q6PKG0 1096 aaKnown RBP23.84■■□□□ 1.41
CCS-203ENST00000526058 EDC4Q6P2E9 1401 aaKnown RBP23.84■■□□□ 1.41
CCS-203ENST00000526058 AATKQ6ZMQ8 1374 aa23.83■■□□□ 1.41
CCS-203ENST00000526058 NINLQ9Y2I6 1382 aa23.83■■□□□ 1.41
CCS-203ENST00000526058 KRT27Q7Z3Y8 459 aa23.83■■□□□ 1.41
CCS-203ENST00000526058 KCNH5Q8NCM2 988 aa23.83■■□□□ 1.41
CCS-203ENST00000526058 USP35Q9P2H5 1018 aa23.83■■□□□ 1.41
CCS-203ENST00000526058 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
CCS-203ENST00000526058 USP54Q70EL1 1684 aa23.82■■□□□ 1.4
CCS-203ENST00000526058 THSD7AQ9UPZ6 1657 aa23.82■■□□□ 1.4
CCS-203ENST00000526058 COL5A2P05997 1499 aaPredicted RBP23.81■■□□□ 1.4
CCS-203ENST00000526058 NFAT5O94916 1531 aa23.81■■□□□ 1.4
CCS-203ENST00000526058 ARHGEF25Q86VW2 580 aa23.81■■□□□ 1.4
CCS-203ENST00000526058 AXIN2Q9Y2T1 843 aa23.8■■□□□ 1.4
CCS-203ENST00000526058 RGPD5Q99666 1765 aa23.8■■□□□ 1.4
CCS-203ENST00000526058 CDCA8Q53HL2 280 aa23.76■■□□□ 1.39
CCS-203ENST00000526058 TCP11L2Q8N4U5 519 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms