RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 PRR36Q9H6K5 1346 aa14.09□□□□□ -0.15
TRAPPC4-206ENST00000525303 EIF3AQ14152 1382 aaKnown RBP14.09□□□□□ -0.15
TRAPPC4-206ENST00000525303 GPRASP1Q5JY77 1395 aa14.09□□□□□ -0.15
TRAPPC4-206ENST00000525303 TNS1Q9HBL0 1735 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-206ENST00000525303 BTG4Q9NY30 223 aa14.08□□□□□ -0.16
TRAPPC4-206ENST00000525303 KDM2AQ9Y2K7 1162 aa14.08□□□□□ -0.16
TRAPPC4-206ENST00000525303 FAM98CQ17RN3 349 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-206ENST00000525303 DCAF11Q8TEB1 546 aa14.07□□□□□ -0.16
TRAPPC4-206ENST00000525303 THSD7AQ9UPZ6 1657 aa14.07□□□□□ -0.16
TRAPPC4-206ENST00000525303 WASLO00401 505 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC4-206ENST00000525303 TOPAZ1Q8N9V7 1692 aa14.06□□□□□ -0.16
TRAPPC4-206ENST00000525303 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC4-206ENST00000525303 NGDNQ8NEJ9 315 aaKnown RBP14.04□□□□□ -0.16
TRAPPC4-206ENST00000525303 ATP7BP35670 1465 aa14.04□□□□□ -0.16
TRAPPC4-206ENST00000525303 BAG6P46379 1132 aa14.03□□□□□ -0.16
TRAPPC4-206ENST00000525303 SPATA31A5Q5VU36 1347 aa14.03□□□□□ -0.16
TRAPPC4-206ENST00000525303 SPATA31A7Q8IWB4 1347 aa14.03□□□□□ -0.16
TRAPPC4-206ENST00000525303 KIAA1210Q9ULL0 1709 aa14.03□□□□□ -0.16
TRAPPC4-206ENST00000525303 FAM182BQ5T319 152 aa14.02□□□□□ -0.17
TRAPPC4-206ENST00000525303 PSDA5PKW4 1024 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC4-206ENST00000525303 PRDM11Q9NQV5 511 aa14.01□□□□□ -0.17
TRAPPC4-206ENST00000525303 EN1Q05925 392 aaPredicted RBP14□□□□□ -0.17
TRAPPC4-206ENST00000525303 NUDT16Q96DE0 195 aaKnown RBP14□□□□□ -0.17
TRAPPC4-206ENST00000525303 STAC3Q96MF2 364 aa14□□□□□ -0.17
TRAPPC4-206ENST00000525303 KIAA0232Q92628 1395 aa13.99□□□□□ -0.17
TRAPPC4-206ENST00000525303 NRKQ7Z2Y5 1582 aa13.99□□□□□ -0.17
TRAPPC4-206ENST00000525303 CHRNA2Q15822 529 aa13.98□□□□□ -0.17
TRAPPC4-206ENST00000525303 SPATA31A1Q5TZJ5 1347 aa13.97□□□□□ -0.17
TRAPPC4-206ENST00000525303 HRCP23327 699 aa13.97□□□□□ -0.17
TRAPPC4-206ENST00000525303 CDK19Q9BWU1 502 aa13.97□□□□□ -0.17
TRAPPC4-206ENST00000525303 STRN4Q9NRL3 753 aa13.97□□□□□ -0.17
TRAPPC4-206ENST00000525303 RREB1Q92766 1687 aa13.97□□□□□ -0.17
TRAPPC4-206ENST00000525303 DISP2A7MBM2 1401 aa13.97□□□□□ -0.17
TRAPPC4-206ENST00000525303 LMO7Q8WWI1 1683 aa13.96□□□□□ -0.17
TRAPPC4-206ENST00000525303 QRICH2Q9H0J4 1663 aa13.96□□□□□ -0.17
TRAPPC4-206ENST00000525303 ZC3H6P61129 1189 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-206ENST00000525303 NUTM2GQ5VZR2 741 aa13.96□□□□□ -0.17
TRAPPC4-206ENST00000525303 POLR3AO14802 1390 aaPredicted RBP13.96□□□□□ -0.18
TRAPPC4-206ENST00000525303 NUP188Q5SRE5 1749 aa13.95□□□□□ -0.18
TRAPPC4-206ENST00000525303 ACEP12821 1306 aa13.94□□□□□ -0.18
TRAPPC4-206ENST00000525303 PARP4Q9UKK3 1724 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-206ENST00000525303 SBF2Q86WG5 1849 aa13.94□□□□□ -0.18
TRAPPC4-206ENST00000525303 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
TRAPPC4-206ENST00000525303 SSH2Q76I76 1423 aa13.93□□□□□ -0.18
TRAPPC4-206ENST00000525303 R3HDM1Q15032 1099 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-206ENST00000525303 EZH2Q15910 746 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-206ENST00000525303 NBPF8Q3BBV2 869 aa13.93□□□□□ -0.18
TRAPPC4-206ENST00000525303 USP35Q9P2H5 1018 aa13.93□□□□□ -0.18
TRAPPC4-206ENST00000525303 CCDC61Q9Y6R9 512 aa13.93□□□□□ -0.18
TRAPPC4-206ENST00000525303 TRIM37O94972 964 aa13.92□□□□□ -0.18
TRAPPC4-206ENST00000525303 FAM196AQ6ZSG2 479 aa13.92□□□□□ -0.18
TRAPPC4-206ENST00000525303 WNK3Q9BYP7 1800 aa13.92□□□□□ -0.18
TRAPPC4-206ENST00000525303 RGPD5Q99666 1765 aa13.91□□□□□ -0.18
TRAPPC4-206ENST00000525303 EVA1CP58658 441 aa13.91□□□□□ -0.18
TRAPPC4-206ENST00000525303 ABTB2Q8N961 1025 aa13.91□□□□□ -0.18
TRAPPC4-206ENST00000525303 PLEKHG3A1L390 1219 aa13.9□□□□□ -0.18
TRAPPC4-206ENST00000525303 CAMKK2Q96RR4 588 aa13.9□□□□□ -0.18
TRAPPC4-206ENST00000525303 PPIP5K1Q6PFW1 1433 aa13.9□□□□□ -0.19
TRAPPC4-206ENST00000525303 CPDO75976 1380 aa13.89□□□□□ -0.19
TRAPPC4-206ENST00000525303 APBA3O96018 575 aa13.89□□□□□ -0.19
TRAPPC4-206ENST00000525303 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
TRAPPC4-206ENST00000525303 NBPF1Q3BBV0 1214 aa13.89□□□□□ -0.19
TRAPPC4-206ENST00000525303 LARP1Q6PKG0 1096 aaKnown RBP13.89□□□□□ -0.19
TRAPPC4-206ENST00000525303 BARGINQ6ZT62 677 aa13.89□□□□□ -0.19
TRAPPC4-206ENST00000525303 USP19O94966 1318 aa13.89□□□□□ -0.19
TRAPPC4-206ENST00000525303 AKAP12Q02952 1782 aa13.88□□□□□ -0.19
TRAPPC4-206ENST00000525303 SRPK2P78362 688 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-206ENST00000525303 PEAK1Q9H792 1746 aa13.87□□□□□ -0.19
TRAPPC4-206ENST00000525303 LRRC37A3O60309 1634 aa13.87□□□□□ -0.19
TRAPPC4-206ENST00000525303 PARD3Q8TEW0 1356 aa13.87□□□□□ -0.19
TRAPPC4-206ENST00000525303 RGPD3A6NKT7 1758 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC4-206ENST00000525303 COL18A1P39060 1754 aa13.87□□□□□ -0.19
TRAPPC4-206ENST00000525303 RGPD4Q7Z3J3 1758 aa13.87□□□□□ -0.19
TRAPPC4-206ENST00000525303 TCP11L2Q8N4U5 519 aa13.87□□□□□ -0.19
TRAPPC4-206ENST00000525303 PIK3C2AO00443 1686 aa13.87□□□□□ -0.19
TRAPPC4-206ENST00000525303 COL5A2P05997 1499 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC4-206ENST00000525303 GCP02774 474 aa13.86□□□□□ -0.19
TRAPPC4-206ENST00000525303 NLRP13Q86W25 1043 aa13.86□□□□□ -0.19
TRAPPC4-206ENST00000525303 CABP2Q9NPB3 220 aa13.86□□□□□ -0.19
TRAPPC4-206ENST00000525303 CENPJQ9HC77 1338 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC4-206ENST00000525303 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
TRAPPC4-206ENST00000525303 SLIT3O75094 1523 aa13.85□□□□□ -0.19
TRAPPC4-206ENST00000525303 THRAP3Q9Y2W1 955 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-206ENST00000525303 BRD4O60885 1362 aaPredicted RBP13.83□□□□□ -0.19
TRAPPC4-206ENST00000525303 USP6P35125 1406 aa13.83□□□□□ -0.2
TRAPPC4-206ENST00000525303 CRB1P82279 1406 aa13.83□□□□□ -0.2
TRAPPC4-206ENST00000525303 ZBTB7CA1YPR0 619 aa13.83□□□□□ -0.2
TRAPPC4-206ENST00000525303 MSH5O43196 834 aa13.82□□□□□ -0.2
TRAPPC4-206ENST00000525303 TRIM26Q12899 539 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-206ENST00000525303 CABP1Q9NZU7 370 aa13.82□□□□□ -0.2
TRAPPC4-206ENST00000525303 KAT6BQ8WYB5 2073 aa13.82□□□□□ -0.2
TRAPPC4-206ENST00000525303 NLRP6P59044 892 aa13.81□□□□□ -0.2
TRAPPC4-206ENST00000525303 NBPF14Q5TI25 921 aa13.81□□□□□ -0.2
TRAPPC4-206ENST00000525303 OVOS2A0A0G2JMS6 1433 aa13.81□□□□□ -0.2
TRAPPC4-206ENST00000525303 OVOS2A0A0J9YW53 1432 aa13.81□□□□□ -0.2
TRAPPC4-206ENST00000525303 OVOS2Q6IE36 1432 aa13.81□□□□□ -0.2
TRAPPC4-206ENST00000525303 AATKQ6ZMQ8 1374 aa13.8□□□□□ -0.2
TRAPPC4-206ENST00000525303 MON2Q7Z3U7 1717 aa13.79□□□□□ -0.2
TRAPPC4-206ENST00000525303 CASZ1Q86V15 1759 aa13.79□□□□□ -0.2
TRAPPC4-206ENST00000525303 LTN1O94822 1766 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms