RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 BRD4O60885 1362 aaPredicted RBP24.76■■□□□ 1.55
TSPAN4-214ENST00000525201 PPIP5K1Q6PFW1 1433 aa24.76■■□□□ 1.55
TSPAN4-214ENST00000525201 CABLES1Q8TDN4 633 aa24.75■■□□□ 1.55
TSPAN4-214ENST00000525201 ACEP12821 1306 aa24.75■■□□□ 1.55
TSPAN4-214ENST00000525201 RALGAPBQ86X10 1494 aa24.74■■□□□ 1.55
TSPAN4-214ENST00000525201 PLCH1Q4KWH8 1693 aa24.74■■□□□ 1.55
TSPAN4-214ENST00000525201 PLEKHG5O94827 1062 aa24.73■■□□□ 1.55
TSPAN4-214ENST00000525201 GJD4Q96KN9 370 aaPredicted RBP24.73■■□□□ 1.55
TSPAN4-214ENST00000525201 NBPF8Q3BBV2 869 aa24.72■■□□□ 1.55
TSPAN4-214ENST00000525201 SBNO2Q9Y2G9 1366 aa24.71■■□□□ 1.55
TSPAN4-214ENST00000525201 CARD11Q9BXL7 1154 aa24.71■■□□□ 1.55
TSPAN4-214ENST00000525201 COL14A1Q05707 1796 aaKnown RBP24.7■■□□□ 1.55
TSPAN4-214ENST00000525201 ATAD2Q6PL18 1390 aa24.7■■□□□ 1.55
TSPAN4-214ENST00000525201 CABP2Q9NPB3 220 aa24.7■■□□□ 1.54
TSPAN4-214ENST00000525201 CRYBG1Q9Y4K1 1723 aa24.69■■□□□ 1.54
TSPAN4-214ENST00000525201 VPS72Q15906 364 aa24.67■■□□□ 1.54
TSPAN4-214ENST00000525201 UPF1Q92900 1129 aaKnown RBP eCLIP24.66■■□□□ 1.549e-9■■■□□ 17
TSPAN4-214ENST00000525201 PHRF1Q9P1Y6 1649 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-214ENST00000525201 ABTB2Q8N961 1025 aa24.65■■□□□ 1.54
TSPAN4-214ENST00000525201 PRDM11Q9NQV5 511 aa24.65■■□□□ 1.54
TSPAN4-214ENST00000525201 FAM83GA6ND36 823 aa24.64■■□□□ 1.54
TSPAN4-214ENST00000525201 CCDC9Q9Y3X0 531 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-214ENST00000525201 CLSPNQ9HAW4 1339 aa24.63■■□□□ 1.53
TSPAN4-214ENST00000525201 USP6P35125 1406 aa24.63■■□□□ 1.53
TSPAN4-214ENST00000525201 SLC24A1O60721 1099 aa24.63■■□□□ 1.53
TSPAN4-214ENST00000525201 NLRP13Q86W25 1043 aa24.63■■□□□ 1.53
TSPAN4-214ENST00000525201 CABP1Q9NZU7 370 aa24.63■■□□□ 1.53
TSPAN4-214ENST00000525201 GLI3P10071 1580 aa24.63■■□□□ 1.53
TSPAN4-214ENST00000525201 ZNF692Q9BU19 519 aaPredicted RBP24.61■■□□□ 1.53
TSPAN4-214ENST00000525201 BTG4Q9NY30 223 aa24.61■■□□□ 1.53
TSPAN4-214ENST00000525201 NRAPQ86VF7 1730 aa24.61■■□□□ 1.53
TSPAN4-214ENST00000525201 KIAA0232Q92628 1395 aa24.58■■□□□ 1.53
TSPAN4-214ENST00000525201 TIMELESSQ9UNS1 1208 aa24.58■■□□□ 1.53
TSPAN4-214ENST00000525201 NRKQ7Z2Y5 1582 aa24.58■■□□□ 1.52
TSPAN4-214ENST00000525201 USP19O94966 1318 aa24.58■■□□□ 1.52
TSPAN4-214ENST00000525201 NUTM2GQ5VZR2 741 aa24.56■■□□□ 1.52
TSPAN4-214ENST00000525201 CPDO75976 1380 aa24.55■■□□□ 1.52
TSPAN4-214ENST00000525201 CCDC125Q86Z20 511 aa24.54■■□□□ 1.52
TSPAN4-214ENST00000525201 TTC21AQ8NDW8 1320 aa24.54■■□□□ 1.52
TSPAN4-214ENST00000525201 PUS7Q96PZ0 661 aaKnown RBP24.53■■□□□ 1.52
TSPAN4-214ENST00000525201 AKAP12Q02952 1782 aa24.52■■□□□ 1.52
TSPAN4-214ENST00000525201 A0A0G2JS52 829 aa24.52■■□□□ 1.52
TSPAN4-214ENST00000525201 ONECUT3O60422 494 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-214ENST00000525201 ZC3H6P61129 1189 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-214ENST00000525201 MYT1Q01538 1121 aa24.52■■□□□ 1.52
TSPAN4-214ENST00000525201 SEPT12Q8IYM1 358 aa24.52■■□□□ 1.52
TSPAN4-214ENST00000525201 NLRP6P59044 892 aa24.51■■□□□ 1.51
TSPAN4-214ENST00000525201 KTN1Q86UP2 1357 aaKnown RBP24.51■■□□□ 1.51
TSPAN4-214ENST00000525201 SSH2Q76I76 1423 aa24.51■■□□□ 1.51
TSPAN4-214ENST00000525201 GCP02774 474 aa24.5■■□□□ 1.51
TSPAN4-214ENST00000525201 NINLQ9Y2I6 1382 aa24.5■■□□□ 1.51
TSPAN4-214ENST00000525201 CPSF1Q10570 1443 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-214ENST00000525201 PCGF6Q9BYE7 350 aa24.49■■□□□ 1.51
TSPAN4-214ENST00000525201 SPATA31A5Q5VU36 1347 aa24.49■■□□□ 1.51
TSPAN4-214ENST00000525201 SPATA31A7Q8IWB4 1347 aa24.49■■□□□ 1.51
TSPAN4-214ENST00000525201 SLIT3O75094 1523 aa24.49■■□□□ 1.51
TSPAN4-214ENST00000525201 PIK3C2AO00443 1686 aa24.48■■□□□ 1.51
TSPAN4-214ENST00000525201 EVA1CP58658 441 aa24.48■■□□□ 1.51
TSPAN4-214ENST00000525201 CHRNA2Q15822 529 aa24.48■■□□□ 1.51
TSPAN4-214ENST00000525201 HDGFL2Q7Z4V5 671 aaPredicted RBP24.48■■□□□ 1.51
TSPAN4-214ENST00000525201 TTC21BQ7Z4L5 1316 aa24.47■■□□□ 1.51
TSPAN4-214ENST00000525201 KCNH5Q8NCM2 988 aa24.47■■□□□ 1.51
TSPAN4-214ENST00000525201 MON2Q7Z3U7 1717 aa24.47■■□□□ 1.51
TSPAN4-214ENST00000525201 FAM98CQ17RN3 349 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-214ENST00000525201 KRT27Q7Z3Y8 459 aa24.46■■□□□ 1.51
TSPAN4-214ENST00000525201 STRN4Q9NRL3 753 aa24.46■■□□□ 1.51
TSPAN4-214ENST00000525201 TERF2IPQ9NYB0 399 aa24.46■■□□□ 1.51
TSPAN4-214ENST00000525201 TMC1Q8TDI8 760 aa24.45■■□□□ 1.5
TSPAN4-214ENST00000525201 LMO7Q8WWI1 1683 aa24.45■■□□□ 1.5
TSPAN4-214ENST00000525201 BLMP54132 1417 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-214ENST00000525201 SPATA31A1Q5TZJ5 1347 aa24.43■■□□□ 1.5
TSPAN4-214ENST00000525201 BRWD3Q6RI45 1802 aa24.43■■□□□ 1.5
TSPAN4-214ENST00000525201 ST20-MTHFSA0A0A6YYL1 179 aa24.43■■□□□ 1.5
TSPAN4-214ENST00000525201 SF3B2Q13435 895 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-214ENST00000525201 USP47Q96K76 1375 aa24.42■■□□□ 1.5
TSPAN4-214ENST00000525201 AATKQ6ZMQ8 1374 aa24.42■■□□□ 1.5
TSPAN4-214ENST00000525201 THSD7AQ9UPZ6 1657 aa24.41■■□□□ 1.5
TSPAN4-214ENST00000525201 EDC4Q6P2E9 1401 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-214ENST00000525201 CAMTA1Q9Y6Y1 1673 aa24.4■■□□□ 1.5
TSPAN4-214ENST00000525201 CDCA8Q53HL2 280 aa24.4■■□□□ 1.5
TSPAN4-214ENST00000525201 TESK2Q96S53 571 aa24.4■■□□□ 1.5
TSPAN4-214ENST00000525201 TMF1P82094 1093 aa24.39■■□□□ 1.49
TSPAN4-214ENST00000525201 THRAP3Q9Y2W1 955 aaKnown RBP24.39■■□□□ 1.49
TSPAN4-214ENST00000525201 COL5A2P05997 1499 aaPredicted RBP24.38■■□□□ 1.49
TSPAN4-214ENST00000525201 ABCC6O95255 1503 aa24.38■■□□□ 1.49
TSPAN4-214ENST00000525201 ZBTB7CA1YPR0 619 aa24.37■■□□□ 1.49
TSPAN4-214ENST00000525201 BARGINQ6ZT62 677 aa24.37■■□□□ 1.49
TSPAN4-214ENST00000525201 CCER1Q8TC90 406 aaPredicted RBP24.37■■□□□ 1.49
TSPAN4-214ENST00000525201 CD163L1Q9NR16 1453 aa24.37■■□□□ 1.49
TSPAN4-214ENST00000525201 USP54Q70EL1 1684 aa24.37■■□□□ 1.49
TSPAN4-214ENST00000525201 TCP11L2Q8N4U5 519 aa24.36■■□□□ 1.49
TSPAN4-214ENST00000525201 USP31Q70CQ4 1352 aa24.36■■□□□ 1.49
TSPAN4-214ENST00000525201 CRB1P82279 1406 aa24.35■■□□□ 1.49
TSPAN4-214ENST00000525201 A0A1W2PP64 1363 aa24.35■■□□□ 1.49
TSPAN4-214ENST00000525201 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.35■■□□□ 1.49
TSPAN4-214ENST00000525201 SLC12A5Q9H2X9 1139 aa24.35■■□□□ 1.49
TSPAN4-214ENST00000525201 USP35Q9P2H5 1018 aa24.34■■□□□ 1.49
TSPAN4-214ENST00000525201 LARP1Q6PKG0 1096 aaKnown RBP24.33■■□□□ 1.49
TSPAN4-214ENST00000525201 ARHGEF25Q86VW2 580 aa24.32■■□□□ 1.48
TSPAN4-214ENST00000525201 NFAT5O94916 1531 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms