RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 NGDNQ8NEJ9 315 aaKnown RBP17.16■□□□□ 0.34
CLNS1A-202ENST00000525064 CDK19Q9BWU1 502 aa17.16■□□□□ 0.34
CLNS1A-202ENST00000525064 VPS72Q15906 364 aa17.15■□□□□ 0.34
CLNS1A-202ENST00000525064 SIN3AQ96ST3 1273 aa17.14■□□□□ 0.33
CLNS1A-202ENST00000525064 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
CLNS1A-202ENST00000525064 L3MBTL2Q969R5 705 aa17.12■□□□□ 0.33
CLNS1A-202ENST00000525064 POLR3AO14802 1390 aaPredicted RBP17.12■□□□□ 0.33
CLNS1A-202ENST00000525064 NRKQ7Z2Y5 1582 aa17.11■□□□□ 0.33
CLNS1A-202ENST00000525064 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
CLNS1A-202ENST00000525064 CCDC9Q9Y3X0 531 aaKnown RBP17.11■□□□□ 0.33
CLNS1A-202ENST00000525064 ACEP12821 1306 aa17.11■□□□□ 0.33
CLNS1A-202ENST00000525064 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
CLNS1A-202ENST00000525064 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
CLNS1A-202ENST00000525064 NUTM2GQ5VZR2 741 aa17.09■□□□□ 0.33
CLNS1A-202ENST00000525064 THSD7AQ9UPZ6 1657 aa17.09■□□□□ 0.33
CLNS1A-202ENST00000525064 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
CLNS1A-202ENST00000525064 KIAA0232Q92628 1395 aa17.07■□□□□ 0.32
CLNS1A-202ENST00000525064 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
CLNS1A-202ENST00000525064 ONECUT3O60422 494 aaPredicted RBP17.07■□□□□ 0.32
CLNS1A-202ENST00000525064 NBPF8Q3BBV2 869 aa17.07■□□□□ 0.32
CLNS1A-202ENST00000525064 CCDC61Q9Y6R9 512 aa17.07■□□□□ 0.32
CLNS1A-202ENST00000525064 NEUROD1Q13562 356 aa17.06■□□□□ 0.32
CLNS1A-202ENST00000525064 CHRNA2Q15822 529 aa17.06■□□□□ 0.32
CLNS1A-202ENST00000525064 FAM98CQ17RN3 349 aaKnown RBP17.06■□□□□ 0.32
CLNS1A-202ENST00000525064 CABP2Q9NPB3 220 aa17.06■□□□□ 0.32
CLNS1A-202ENST00000525064 LMO7Q8WWI1 1683 aa17.06■□□□□ 0.32
CLNS1A-202ENST00000525064 BLMP54132 1417 aaPredicted RBP17.05■□□□□ 0.32
CLNS1A-202ENST00000525064 SRPK2P78362 688 aaKnown RBP17.05■□□□□ 0.32
CLNS1A-202ENST00000525064 PRDM11Q9NQV5 511 aa17.05■□□□□ 0.32
CLNS1A-202ENST00000525064 AKAP12Q02952 1782 aa17.05■□□□□ 0.32
CLNS1A-202ENST00000525064 SPATA31A5Q5VU36 1347 aa17.04■□□□□ 0.32
CLNS1A-202ENST00000525064 SPATA31A7Q8IWB4 1347 aa17.04■□□□□ 0.32
CLNS1A-202ENST00000525064 A0A0G2JS52 829 aa17.03■□□□□ 0.32
CLNS1A-202ENST00000525064 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
CLNS1A-202ENST00000525064 MYT1Q01538 1121 aa17.03■□□□□ 0.32
CLNS1A-202ENST00000525064 KRT27Q7Z3Y8 459 aa17.03■□□□□ 0.32
CLNS1A-202ENST00000525064 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
CLNS1A-202ENST00000525064 CCDC125Q86Z20 511 aa17.03■□□□□ 0.32
CLNS1A-202ENST00000525064 PIK3C2AO00443 1686 aa17.03■□□□□ 0.32
CLNS1A-202ENST00000525064 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
CLNS1A-202ENST00000525064 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
CLNS1A-202ENST00000525064 USP19O94966 1318 aa17.01■□□□□ 0.31
CLNS1A-202ENST00000525064 CAMTA1Q9Y6Y1 1673 aa17.01■□□□□ 0.31
CLNS1A-202ENST00000525064 SRCAPQ6ZRS2 3230 aa17.01■□□□□ 0.31
CLNS1A-202ENST00000525064 ROCK2O75116 1388 aaKnown RBP17.01■□□□□ 0.31
CLNS1A-202ENST00000525064 USP6P35125 1406 aa17■□□□□ 0.31
CLNS1A-202ENST00000525064 ABTB2Q8N961 1025 aa17■□□□□ 0.31
CLNS1A-202ENST00000525064 FAM182BQ5T319 152 aa16.99■□□□□ 0.31
CLNS1A-202ENST00000525064 STRN4Q9NRL3 753 aa16.99■□□□□ 0.31
CLNS1A-202ENST00000525064 CABP1Q9NZU7 370 aa16.99■□□□□ 0.31
CLNS1A-202ENST00000525064 SPATA31A1Q5TZJ5 1347 aa16.98■□□□□ 0.31
CLNS1A-202ENST00000525064 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
CLNS1A-202ENST00000525064 SLIT3O75094 1523 aa16.98■□□□□ 0.31
CLNS1A-202ENST00000525064 RGPD5Q99666 1765 aa16.97■□□□□ 0.31
CLNS1A-202ENST00000525064 CPDO75976 1380 aa16.97■□□□□ 0.31
CLNS1A-202ENST00000525064 COL18A1P39060 1754 aa16.97■□□□□ 0.31
CLNS1A-202ENST00000525064 MON2Q7Z3U7 1717 aa16.96■□□□□ 0.31
CLNS1A-202ENST00000525064 ZRANB1Q9UGI0 708 aa16.96■□□□□ 0.31
CLNS1A-202ENST00000525064 EVC2Q86UK5 1308 aa16.96■□□□□ 0.3
CLNS1A-202ENST00000525064 WNK3Q9BYP7 1800 aa16.95■□□□□ 0.3
CLNS1A-202ENST00000525064 GCP02774 474 aa16.94■□□□□ 0.3
CLNS1A-202ENST00000525064 SF3B2Q13435 895 aaKnown RBP16.94■□□□□ 0.3
CLNS1A-202ENST00000525064 COL5A2P05997 1499 aaPredicted RBP16.93■□□□□ 0.3
CLNS1A-202ENST00000525064 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
CLNS1A-202ENST00000525064 BRD4O60885 1362 aaPredicted RBP16.93■□□□□ 0.3
CLNS1A-202ENST00000525064 LARP1Q6PKG0 1096 aaKnown RBP16.93■□□□□ 0.3
CLNS1A-202ENST00000525064 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
CLNS1A-202ENST00000525064 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
CLNS1A-202ENST00000525064 ZBTB7CA1YPR0 619 aa16.9■□□□□ 0.3
CLNS1A-202ENST00000525064 EVA1CP58658 441 aa16.9■□□□□ 0.3
CLNS1A-202ENST00000525064 NLRP6P59044 892 aa16.9■□□□□ 0.3
CLNS1A-202ENST00000525064 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
CLNS1A-202ENST00000525064 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
CLNS1A-202ENST00000525064 LRRC37A3O60309 1634 aa16.88■□□□□ 0.29
CLNS1A-202ENST00000525064 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
CLNS1A-202ENST00000525064 NFAT5O94916 1531 aa16.88■□□□□ 0.29
CLNS1A-202ENST00000525064 BAG6P46379 1132 aa16.88■□□□□ 0.29
CLNS1A-202ENST00000525064 EN1Q05925 392 aaPredicted RBP16.88■□□□□ 0.29
CLNS1A-202ENST00000525064 BARGINQ6ZT62 677 aa16.88■□□□□ 0.29
CLNS1A-202ENST00000525064 TONSLQ96HA7 1378 aa16.88■□□□□ 0.29
CLNS1A-202ENST00000525064 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
CLNS1A-202ENST00000525064 RREB1Q92766 1687 aa16.88■□□□□ 0.29
CLNS1A-202ENST00000525064 CD163L1Q9NR16 1453 aa16.87■□□□□ 0.29
CLNS1A-202ENST00000525064 SBF2Q86WG5 1849 aa16.87■□□□□ 0.29
CLNS1A-202ENST00000525064 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
CLNS1A-202ENST00000525064 AATKQ6ZMQ8 1374 aa16.87■□□□□ 0.29
CLNS1A-202ENST00000525064 PEAK1Q9H792 1746 aa16.87■□□□□ 0.29
CLNS1A-202ENST00000525064 DISP2A7MBM2 1401 aa16.87■□□□□ 0.29
CLNS1A-202ENST00000525064 TCP11L2Q8N4U5 519 aa16.86■□□□□ 0.29
CLNS1A-202ENST00000525064 CRB1P82279 1406 aa16.86■□□□□ 0.29
CLNS1A-202ENST00000525064 LRP5O75197 1615 aa16.85■□□□□ 0.29
CLNS1A-202ENST00000525064 NUP188Q5SRE5 1749 aa16.85■□□□□ 0.29
CLNS1A-202ENST00000525064 LTN1O94822 1766 aa16.85■□□□□ 0.29
CLNS1A-202ENST00000525064 KTN1Q86UP2 1357 aaKnown RBP16.85■□□□□ 0.29
CLNS1A-202ENST00000525064 PSDA5PKW4 1024 aaPredicted RBP16.84■□□□□ 0.29
CLNS1A-202ENST00000525064 SOX12O15370 315 aa16.84■□□□□ 0.29
CLNS1A-202ENST00000525064 TRIM37O94972 964 aa16.84■□□□□ 0.29
CLNS1A-202ENST00000525064 AXIN2Q9Y2T1 843 aa16.84■□□□□ 0.29
CLNS1A-202ENST00000525064 EZH2Q15910 746 aaKnown RBP16.83■□□□□ 0.28
CLNS1A-202ENST00000525064 TTC21AQ8NDW8 1320 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms