RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 ANKLE2Q86XL3 938 aa20.06■□□□□ 0.8
BEST1-204ENST00000524926 ADAMTSL3P82987 1691 aa20.06■□□□□ 0.8
BEST1-204ENST00000524926 DIP2AQ14689 1571 aa20.06■□□□□ 0.8
BEST1-204ENST00000524926 ADGRB2O60241 1585 aa20.06■□□□□ 0.8
BEST1-204ENST00000524926 WWC1Q8IX03 1113 aa20.05■□□□□ 0.8
BEST1-204ENST00000524926 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
BEST1-204ENST00000524926 E9PSI1 815 aa20.04■□□□□ 0.8
BEST1-204ENST00000524926 ZRANB1Q9UGI0 708 aa20.04■□□□□ 0.8
BEST1-204ENST00000524926 PTCH1Q13635 1447 aa20.04■□□□□ 0.8
BEST1-204ENST00000524926 DIAPH1O60610 1272 aaKnown RBP20.04■□□□□ 0.8
BEST1-204ENST00000524926 COG3Q96JB2 828 aa20.03■□□□□ 0.8
BEST1-204ENST00000524926 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
BEST1-204ENST00000524926 KCNA6P17658 529 aa20.03■□□□□ 0.8
BEST1-204ENST00000524926 TRMT2AQ8IZ69 625 aaKnown RBP20.03■□□□□ 0.8
BEST1-204ENST00000524926 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
BEST1-204ENST00000524926 ACEP12821 1306 aa20.02■□□□□ 0.8
BEST1-204ENST00000524926 PLIN1O60240 522 aa20.02■□□□□ 0.8
BEST1-204ENST00000524926 ITSN1Q15811 1721 aa20.02■□□□□ 0.8
BEST1-204ENST00000524926 COL3A1P02461 1466 aaPredicted RBP20.02■□□□□ 0.79
BEST1-204ENST00000524926 PLEKHG3A1L390 1219 aa20.01■□□□□ 0.79
BEST1-204ENST00000524926 TSHZ2Q9NRE2 1034 aa20.01■□□□□ 0.79
BEST1-204ENST00000524926 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
BEST1-204ENST00000524926 SETD1BQ9UPS6 1966 aaKnown RBP20.01■□□□□ 0.79
BEST1-204ENST00000524926 CCDC136Q96JN2 1154 aa20.01■□□□□ 0.79
BEST1-204ENST00000524926 PNPLA6Q8IY17 1366 aa20■□□□□ 0.79
BEST1-204ENST00000524926 AKAP12Q02952 1782 aa20■□□□□ 0.79
BEST1-204ENST00000524926 IQSEC2Q5JU85 1478 aa19.99■□□□□ 0.79
BEST1-204ENST00000524926 EXOC6Q8TAG9 804 aa19.99■□□□□ 0.79
BEST1-204ENST00000524926 PIK3R4Q99570 1358 aa19.99■□□□□ 0.79
BEST1-204ENST00000524926 MAP2P11137 1827 aaKnown RBP19.99■□□□□ 0.79
BEST1-204ENST00000524926 PMFBP1Q8TBY8 1022 aa19.98■□□□□ 0.79
BEST1-204ENST00000524926 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
BEST1-204ENST00000524926 NKTRP30414 1462 aaKnown RBP19.97■□□□□ 0.79
BEST1-204ENST00000524926 TTC21BQ7Z4L5 1316 aa19.97■□□□□ 0.79
BEST1-204ENST00000524926 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
BEST1-204ENST00000524926 MAPK8IP3Q9UPT6 1336 aa19.97■□□□□ 0.79
BEST1-204ENST00000524926 PLEKHF1Q96S99 279 aa19.97■□□□□ 0.79
BEST1-204ENST00000524926 XRN1Q8IZH2 1706 aaKnown RBP19.97■□□□□ 0.79
BEST1-204ENST00000524926 TOPAZ1Q8N9V7 1692 aa19.96■□□□□ 0.79
BEST1-204ENST00000524926 CCDC27Q2M243 656 aa19.96■□□□□ 0.79
BEST1-204ENST00000524926 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
BEST1-204ENST00000524926 WDR63Q8IWG1 891 aa19.95■□□□□ 0.78
BEST1-204ENST00000524926 RRS1Q15050 365 aaKnown RBP19.95■□□□□ 0.78
BEST1-204ENST00000524926 PNNQ9H307 717 aaKnown RBP19.95■□□□□ 0.78
BEST1-204ENST00000524926 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.78
BEST1-204ENST00000524926 NGDNQ8NEJ9 315 aaKnown RBP19.94■□□□□ 0.78
BEST1-204ENST00000524926 USP6P35125 1406 aa19.94■□□□□ 0.78
BEST1-204ENST00000524926 NCBP3Q53F19 620 aaKnown RBP19.93■□□□□ 0.78
BEST1-204ENST00000524926 TMPOP42166 694 aaKnown RBP19.92■□□□□ 0.78
BEST1-204ENST00000524926 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.92■□□□□ 0.78
BEST1-204ENST00000524926 FCHSD2O94868 740 aa19.92■□□□□ 0.78
BEST1-204ENST00000524926 RBM33Q96EV2 1170 aaKnown RBP19.91■□□□□ 0.78
BEST1-204ENST00000524926 RGPD8O14715 1765 aaPredicted RBP19.9■□□□□ 0.78
BEST1-204ENST00000524926 C20orf194Q5TEA3 1177 aa19.9■□□□□ 0.78
BEST1-204ENST00000524926 CRBNQ96SW2 442 aa19.9■□□□□ 0.78
BEST1-204ENST00000524926 NEFMP07197 916 aa19.9■□□□□ 0.78
BEST1-204ENST00000524926 IL13P35225 146 aa19.89■□□□□ 0.77
BEST1-204ENST00000524926 CHD2O14647 1828 aaKnown RBP19.89■□□□□ 0.77
BEST1-204ENST00000524926 NRKQ7Z2Y5 1582 aa19.89■□□□□ 0.77
BEST1-204ENST00000524926 BCAR3O75815 825 aa19.88■□□□□ 0.77
BEST1-204ENST00000524926 HMOX1P09601 288 aa19.88■□□□□ 0.77
BEST1-204ENST00000524926 PRKAR2BP31323 418 aa19.88■□□□□ 0.77
BEST1-204ENST00000524926 RIPK4P57078 832 aa19.88■□□□□ 0.77
BEST1-204ENST00000524926 CDK12Q9NYV4 1490 aaPredicted RBP19.88■□□□□ 0.77
BEST1-204ENST00000524926 RSPH6AQ9H0K4 717 aa19.87■□□□□ 0.77
BEST1-204ENST00000524926 NPHP4O75161 1426 aaPredicted RBP19.87■□□□□ 0.77
BEST1-204ENST00000524926 SOX12O15370 315 aa19.87■□□□□ 0.77
BEST1-204ENST00000524926 MYH16Q9H6N6 1097 aa19.87■□□□□ 0.77
BEST1-204ENST00000524926 TRIM35Q9UPQ4 493 aa19.86■□□□□ 0.77
BEST1-204ENST00000524926 TTC21AQ8NDW8 1320 aa19.86■□□□□ 0.77
BEST1-204ENST00000524926 SSH2Q76I76 1423 aa19.86■□□□□ 0.77
BEST1-204ENST00000524926 ANKARQ7Z5J8 1434 aa19.86■□□□□ 0.77
BEST1-204ENST00000524926 OVOS2A0A0J9YW53 1432 aa19.86■□□□□ 0.77
BEST1-204ENST00000524926 OVOS2Q6IE36 1432 aa19.86■□□□□ 0.77
BEST1-204ENST00000524926 LRRC7Q96NW7 1537 aa19.84■□□□□ 0.77
BEST1-204ENST00000524926 C14orf37Q86TY3 774 aa19.82■□□□□ 0.76
BEST1-204ENST00000524926 FMN2Q9NZ56 1722 aa19.82■□□□□ 0.76
BEST1-204ENST00000524926 PHACTR3Q96KR7 559 aa19.82■□□□□ 0.76
BEST1-204ENST00000524926 USP31Q70CQ4 1352 aa19.81■□□□□ 0.76
BEST1-204ENST00000524926 TSR2Q969E8 191 aaKnown RBP19.81■□□□□ 0.76
BEST1-204ENST00000524926 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
BEST1-204ENST00000524926 NALCNQ8IZF0 1738 aa19.8■□□□□ 0.76
BEST1-204ENST00000524926 PAK3O75914 559 aaPredicted RBP19.8■□□□□ 0.76
BEST1-204ENST00000524926 RARSP54136 660 aaKnown RBP19.79■□□□□ 0.76
BEST1-204ENST00000524926 NLRP6P59044 892 aa19.79■□□□□ 0.76
BEST1-204ENST00000524926 EIF4A2Q14240 407 aaKnown RBP19.79■□□□□ 0.76
BEST1-204ENST00000524926 PHF8Q9UPP1 1060 aa19.79■□□□□ 0.76
BEST1-204ENST00000524926 FANCIQ9NVI1 1328 aa19.79■□□□□ 0.76
BEST1-204ENST00000524926 NFE2L2Q16236 605 aa19.78■□□□□ 0.76
BEST1-204ENST00000524926 HSP90AB2PQ58FF8 381 aa19.78■□□□□ 0.76
BEST1-204ENST00000524926 FRAT1Q92837 279 aaPredicted RBP19.78■□□□□ 0.76
BEST1-204ENST00000524926 NUTM2GQ5VZR2 741 aa19.77■□□□□ 0.76
BEST1-204ENST00000524926 IL16Q14005 1332 aa19.77■□□□□ 0.76
BEST1-204ENST00000524926 RBM19Q9Y4C8 960 aaKnown RBP19.77■□□□□ 0.76
BEST1-204ENST00000524926 ESCO1Q5FWF5 840 aa19.76■□□□□ 0.75
BEST1-204ENST00000524926 ABTB2Q8N961 1025 aa19.76■□□□□ 0.75
BEST1-204ENST00000524926 ADGRL3Q9HAR2 1447 aa19.76■□□□□ 0.75
BEST1-204ENST00000524926 BCL2L13Q9BXK5 485 aa19.76■□□□□ 0.75
BEST1-204ENST00000524926 MAP3K19Q56UN5 1328 aa19.76■□□□□ 0.75
BEST1-204ENST00000524926 EXOSC9Q06265 439 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms