RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 LRP5O75197 1615 aa24.63■■□□□ 1.53
PACSIN3-202ENST00000524509 ONECUT3O60422 494 aaPredicted RBP24.62■■□□□ 1.53
PACSIN3-202ENST00000524509 SRPK2P78362 688 aaKnown RBP24.62■■□□□ 1.53
PACSIN3-202ENST00000524509 VPS72Q15906 364 aa24.62■■□□□ 1.53
PACSIN3-202ENST00000524509 CDCA8Q53HL2 280 aa24.62■■□□□ 1.53
PACSIN3-202ENST00000524509 PUS7Q96PZ0 661 aaKnown RBP24.62■■□□□ 1.53
PACSIN3-202ENST00000524509 NWD2Q9ULI1 1742 aa24.61■■□□□ 1.53
PACSIN3-202ENST00000524509 TMF1P82094 1093 aa24.59■■□□□ 1.53
PACSIN3-202ENST00000524509 CCDC61Q9Y6R9 512 aa24.59■■□□□ 1.53
PACSIN3-202ENST00000524509 TULP4Q9NRJ4 1543 aa24.59■■□□□ 1.53
PACSIN3-202ENST00000524509 TNS3Q68CZ2 1445 aa24.59■■□□□ 1.53
PACSIN3-202ENST00000524509 PLCH1Q4KWH8 1693 aa24.59■■□□□ 1.53
PACSIN3-202ENST00000524509 HAP1P54257 671 aaPredicted RBP24.58■■□□□ 1.53
PACSIN3-202ENST00000524509 NUDT16Q96DE0 195 aaKnown RBP24.58■■□□□ 1.53
PACSIN3-202ENST00000524509 PSME1Q06323 249 aa24.57■■□□□ 1.52
PACSIN3-202ENST00000524509 QRICH2Q9H0J4 1663 aa24.56■■□□□ 1.52
PACSIN3-202ENST00000524509 KRT27Q7Z3Y8 459 aa24.56■■□□□ 1.52
PACSIN3-202ENST00000524509 PHF8Q9UPP1 1060 aa24.56■■□□□ 1.52
PACSIN3-202ENST00000524509 RGPD8O14715 1765 aaPredicted RBP24.55■■□□□ 1.52
PACSIN3-202ENST00000524509 SBNO1A3KN83 1393 aa24.54■■□□□ 1.52
PACSIN3-202ENST00000524509 CABLES1Q8TDN4 633 aa24.54■■□□□ 1.52
PACSIN3-202ENST00000524509 TESK2Q96S53 571 aa24.54■■□□□ 1.52
PACSIN3-202ENST00000524509 ABCA3Q99758 1704 aa24.53■■□□□ 1.52
PACSIN3-202ENST00000524509 CCDC9Q9Y3X0 531 aaKnown RBP24.53■■□□□ 1.52
PACSIN3-202ENST00000524509 CABP2Q9NPB3 220 aa24.52■■□□□ 1.52
PACSIN3-202ENST00000524509 ARHGEF10O15013 1369 aa24.52■■□□□ 1.52
PACSIN3-202ENST00000524509 PLEKHG3A1L390 1219 aa24.5■■□□□ 1.51
PACSIN3-202ENST00000524509 HSPA5P11021 654 aaKnown RBP24.5■■□□□ 1.51
PACSIN3-202ENST00000524509 BAG6P46379 1132 aa24.5■■□□□ 1.51
PACSIN3-202ENST00000524509 NGDNQ8NEJ9 315 aaKnown RBP24.5■■□□□ 1.51
PACSIN3-202ENST00000524509 PRR36Q9H6K5 1346 aa24.49■■□□□ 1.51
PACSIN3-202ENST00000524509 ATP7BP35670 1465 aa24.49■■□□□ 1.51
PACSIN3-202ENST00000524509 FAM83GA6ND36 823 aa24.48■■□□□ 1.51
PACSIN3-202ENST00000524509 NINLQ9Y2I6 1382 aa24.47■■□□□ 1.51
PACSIN3-202ENST00000524509 PSDA5PKW4 1024 aaPredicted RBP24.46■■□□□ 1.51
PACSIN3-202ENST00000524509 LMOD2Q6P5Q4 547 aa24.46■■□□□ 1.51
PACSIN3-202ENST00000524509 NRAPQ86VF7 1730 aa24.45■■□□□ 1.5
PACSIN3-202ENST00000524509 PLEKHG5O94827 1062 aa24.45■■□□□ 1.5
PACSIN3-202ENST00000524509 PMFBP1Q8TBY8 1022 aa24.45■■□□□ 1.5
PACSIN3-202ENST00000524509 ZNF692Q9BU19 519 aaPredicted RBP24.45■■□□□ 1.5
PACSIN3-202ENST00000524509 PPIP5K1Q6PFW1 1433 aa24.44■■□□□ 1.5
PACSIN3-202ENST00000524509 A0A0G2JS52 829 aa24.44■■□□□ 1.5
PACSIN3-202ENST00000524509 MYT1Q01538 1121 aa24.44■■□□□ 1.5
PACSIN3-202ENST00000524509 BRD4O60885 1362 aaPredicted RBP24.43■■□□□ 1.5
PACSIN3-202ENST00000524509 CABP1Q9NZU7 370 aa24.43■■□□□ 1.5
PACSIN3-202ENST00000524509 ITSN1Q15811 1721 aa24.42■■□□□ 1.5
PACSIN3-202ENST00000524509 FAM98CQ17RN3 349 aaKnown RBP24.42■■□□□ 1.5
PACSIN3-202ENST00000524509 POLR3AO14802 1390 aaPredicted RBP24.42■■□□□ 1.5
PACSIN3-202ENST00000524509 RGPD1P0DJD0 1748 aa24.41■■□□□ 1.5
PACSIN3-202ENST00000524509 TERF2IPQ9NYB0 399 aa24.41■■□□□ 1.5
PACSIN3-202ENST00000524509 ACEP12821 1306 aa24.4■■□□□ 1.5
PACSIN3-202ENST00000524509 TMC1Q8TDI8 760 aa24.4■■□□□ 1.5
PACSIN3-202ENST00000524509 BTG4Q9NY30 223 aa24.4■■□□□ 1.5
PACSIN3-202ENST00000524509 COL14A1Q05707 1796 aaKnown RBP24.39■■□□□ 1.5
PACSIN3-202ENST00000524509 TRPM3Q9HCF6 1732 aaPredicted RBP24.39■■□□□ 1.5
PACSIN3-202ENST00000524509 HDGFL2Q7Z4V5 671 aaPredicted RBP24.39■■□□□ 1.49
PACSIN3-202ENST00000524509 EN1Q05925 392 aaPredicted RBP24.38■■□□□ 1.49
PACSIN3-202ENST00000524509 DISP2A7MBM2 1401 aa24.37■■□□□ 1.49
PACSIN3-202ENST00000524509 ALS2Q96Q42 1657 aa24.37■■□□□ 1.49
PACSIN3-202ENST00000524509 SPATA31A5Q5VU36 1347 aa24.35■■□□□ 1.49
PACSIN3-202ENST00000524509 SPATA31A7Q8IWB4 1347 aa24.35■■□□□ 1.49
PACSIN3-202ENST00000524509 THSD7AQ9UPZ6 1657 aa24.34■■□□□ 1.49
PACSIN3-202ENST00000524509 TNS1Q9HBL0 1735 aaKnown RBP24.33■■□□□ 1.49
PACSIN3-202ENST00000524509 R3HDM1Q15032 1099 aaKnown RBP24.33■■□□□ 1.49
PACSIN3-202ENST00000524509 TOPAZ1Q8N9V7 1692 aa24.33■■□□□ 1.49
PACSIN3-202ENST00000524509 SLC12A5Q9H2X9 1139 aa24.32■■□□□ 1.48
PACSIN3-202ENST00000524509 PAK3O75914 559 aaPredicted RBP24.31■■□□□ 1.48
PACSIN3-202ENST00000524509 FAM182BQ5T319 152 aa24.31■■□□□ 1.48
PACSIN3-202ENST00000524509 CRYBG1Q9Y4K1 1723 aa24.3■■□□□ 1.48
PACSIN3-202ENST00000524509 KTN1Q86UP2 1357 aaKnown RBP24.29■■□□□ 1.48
PACSIN3-202ENST00000524509 CPSF1Q10570 1443 aaKnown RBP24.29■■□□□ 1.48
PACSIN3-202ENST00000524509 USP6P35125 1406 aa24.28■■□□□ 1.48
PACSIN3-202ENST00000524509 POLR3GLQ9BT43 218 aa24.28■■□□□ 1.48
PACSIN3-202ENST00000524509 TTC21AQ8NDW8 1320 aa24.28■■□□□ 1.48
PACSIN3-202ENST00000524509 ANKRD36BQ8N2N9 1353 aa24.27■■□□□ 1.48
PACSIN3-202ENST00000524509 EZH2Q15910 746 aaKnown RBP24.26■■□□□ 1.47
PACSIN3-202ENST00000524509 PRDM11Q9NQV5 511 aa24.25■■□□□ 1.47
PACSIN3-202ENST00000524509 FAM196AQ6ZSG2 479 aa24.24■■□□□ 1.47
PACSIN3-202ENST00000524509 ABTB2Q8N961 1025 aa24.24■■□□□ 1.47
PACSIN3-202ENST00000524509 CAMKK2Q96RR4 588 aa24.24■■□□□ 1.47
PACSIN3-202ENST00000524509 NLRP13Q86W25 1043 aa24.23■■□□□ 1.47
PACSIN3-202ENST00000524509 SPATA31A1Q5TZJ5 1347 aa24.23■■□□□ 1.47
PACSIN3-202ENST00000524509 PARD3Q8TEW0 1356 aa24.23■■□□□ 1.47
PACSIN3-202ENST00000524509 EDC4Q6P2E9 1401 aaKnown RBP24.23■■□□□ 1.47
PACSIN3-202ENST00000524509 TTC21BQ7Z4L5 1316 aa24.22■■□□□ 1.47
PACSIN3-202ENST00000524509 A0A1W2PP64 1363 aa24.21■■□□□ 1.47
PACSIN3-202ENST00000524509 KIF7Q2M1P5 1343 aa24.21■■□□□ 1.47
PACSIN3-202ENST00000524509 TRIM37O94972 964 aa24.21■■□□□ 1.47
PACSIN3-202ENST00000524509 SSH2Q76I76 1423 aa24.19■■□□□ 1.46
PACSIN3-202ENST00000524509 KIAA0232Q92628 1395 aa24.18■■□□□ 1.46
PACSIN3-202ENST00000524509 C11orf95C9JLR9 678 aaPredicted RBP24.18■■□□□ 1.46
PACSIN3-202ENST00000524509 CD163L1Q9NR16 1453 aa24.18■■□□□ 1.46
PACSIN3-202ENST00000524509 APBA3O96018 575 aa24.17■■□□□ 1.46
PACSIN3-202ENST00000524509 NLRP6P59044 892 aa24.17■■□□□ 1.46
PACSIN3-202ENST00000524509 CCDC7Q96M83 1385 aa24.16■■□□□ 1.46
PACSIN3-202ENST00000524509 PHRF1Q9P1Y6 1649 aaKnown RBP24.16■■□□□ 1.46
PACSIN3-202ENST00000524509 RREB1Q92766 1687 aa24.15■■□□□ 1.46
PACSIN3-202ENST00000524509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.15■■□□□ 1.46
PACSIN3-202ENST00000524509 CHRNA2Q15822 529 aa24.14■■□□□ 1.45
PACSIN3-202ENST00000524509 KCNH5Q8NCM2 988 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms