RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-215ENST00000524393 NWD2Q9ULI1 1742 aa17.97■□□□□ 0.47
RBBP4-215ENST00000524393 ACEP12821 1306 aa17.97■□□□□ 0.47
RBBP4-215ENST00000524393 GJD4Q96KN9 370 aaPredicted RBP17.96■□□□□ 0.47
RBBP4-215ENST00000524393 PPIP5K1Q6PFW1 1433 aa17.96■□□□□ 0.47
RBBP4-215ENST00000524393 EVC2Q86UK5 1308 aa17.96■□□□□ 0.46
RBBP4-215ENST00000524393 PLEKHG3A1L390 1219 aa17.95■□□□□ 0.46
RBBP4-215ENST00000524393 UPF1Q92900 1129 aaKnown RBP eCLIP17.95■□□□□ 0.46
RBBP4-215ENST00000524393 NBPF8Q3BBV2 869 aa17.94■□□□□ 0.46
RBBP4-215ENST00000524393 CABP2Q9NPB3 220 aa17.94■□□□□ 0.46
RBBP4-215ENST00000524393 ATAD2Q6PL18 1390 aa17.93■□□□□ 0.46
RBBP4-215ENST00000524393 CCDC9Q9Y3X0 531 aaKnown RBP17.93■□□□□ 0.46
RBBP4-215ENST00000524393 COL14A1Q05707 1796 aaKnown RBP17.93■□□□□ 0.46
RBBP4-215ENST00000524393 CRYBG1Q9Y4K1 1723 aa17.92■□□□□ 0.46
RBBP4-215ENST00000524393 RALGAPBQ86X10 1494 aa17.92■□□□□ 0.46
RBBP4-215ENST00000524393 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
RBBP4-215ENST00000524393 VPS72Q15906 364 aa17.91■□□□□ 0.46
RBBP4-215ENST00000524393 CARD11Q9BXL7 1154 aa17.91■□□□□ 0.46
RBBP4-215ENST00000524393 GLI3P10071 1580 aa17.9■□□□□ 0.46
RBBP4-215ENST00000524393 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
RBBP4-215ENST00000524393 BRD4O60885 1362 aaPredicted RBP17.9■□□□□ 0.46
RBBP4-215ENST00000524393 ABTB2Q8N961 1025 aa17.89■□□□□ 0.45
RBBP4-215ENST00000524393 PRDM11Q9NQV5 511 aa17.89■□□□□ 0.45
RBBP4-215ENST00000524393 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
RBBP4-215ENST00000524393 BTG4Q9NY30 223 aa17.88■□□□□ 0.45
RBBP4-215ENST00000524393 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
RBBP4-215ENST00000524393 NRAPQ86VF7 1730 aa17.87■□□□□ 0.45
RBBP4-215ENST00000524393 NLRP13Q86W25 1043 aa17.86■□□□□ 0.45
RBBP4-215ENST00000524393 SBNO2Q9Y2G9 1366 aa17.86■□□□□ 0.45
RBBP4-215ENST00000524393 USP6P35125 1406 aa17.85■□□□□ 0.45
RBBP4-215ENST00000524393 KIAA0232Q92628 1395 aa17.85■□□□□ 0.45
RBBP4-215ENST00000524393 A0A0G2JS52 829 aa17.84■□□□□ 0.45
RBBP4-215ENST00000524393 MYT1Q01538 1121 aa17.84■□□□□ 0.45
RBBP4-215ENST00000524393 NRKQ7Z2Y5 1582 aa17.83■□□□□ 0.45
RBBP4-215ENST00000524393 ZC3H6P61129 1189 aaKnown RBP17.83■□□□□ 0.44
RBBP4-215ENST00000524393 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.44
RBBP4-215ENST00000524393 SEPT12Q8IYM1 358 aa17.82■□□□□ 0.44
RBBP4-215ENST00000524393 USP19O94966 1318 aa17.81■□□□□ 0.44
RBBP4-215ENST00000524393 CHRNA2Q15822 529 aa17.81■□□□□ 0.44
RBBP4-215ENST00000524393 NLRP6P59044 892 aa17.8■□□□□ 0.44
RBBP4-215ENST00000524393 CCDC125Q86Z20 511 aa17.8■□□□□ 0.44
RBBP4-215ENST00000524393 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
RBBP4-215ENST00000524393 ONECUT3O60422 494 aaPredicted RBP17.79■□□□□ 0.44
RBBP4-215ENST00000524393 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
RBBP4-215ENST00000524393 BRWD3Q6RI45 1802 aa17.79■□□□□ 0.44
RBBP4-215ENST00000524393 CPDO75976 1380 aa17.79■□□□□ 0.44
RBBP4-215ENST00000524393 SPATA31A5Q5VU36 1347 aa17.78■□□□□ 0.44
RBBP4-215ENST00000524393 SPATA31A7Q8IWB4 1347 aa17.78■□□□□ 0.44
RBBP4-215ENST00000524393 GCP02774 474 aa17.78■□□□□ 0.44
RBBP4-215ENST00000524393 EVA1CP58658 441 aa17.78■□□□□ 0.44
RBBP4-215ENST00000524393 FAM98CQ17RN3 349 aaKnown RBP17.78■□□□□ 0.44
RBBP4-215ENST00000524393 KTN1Q86UP2 1357 aaKnown RBP17.78■□□□□ 0.44
RBBP4-215ENST00000524393 SLC24A1O60721 1099 aa17.77■□□□□ 0.44
RBBP4-215ENST00000524393 KRT27Q7Z3Y8 459 aa17.77■□□□□ 0.44
RBBP4-215ENST00000524393 PCGF6Q9BYE7 350 aa17.77■□□□□ 0.44
RBBP4-215ENST00000524393 PIK3C2AO00443 1686 aa17.77■□□□□ 0.43
RBBP4-215ENST00000524393 TTC21AQ8NDW8 1320 aa17.76■□□□□ 0.43
RBBP4-215ENST00000524393 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
RBBP4-215ENST00000524393 SSH2Q76I76 1423 aa17.76■□□□□ 0.43
RBBP4-215ENST00000524393 TTC21BQ7Z4L5 1316 aa17.75■□□□□ 0.43
RBBP4-215ENST00000524393 CPSF1Q10570 1443 aaKnown RBP17.75■□□□□ 0.43
RBBP4-215ENST00000524393 ZBTB7CA1YPR0 619 aa17.75■□□□□ 0.43
RBBP4-215ENST00000524393 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
RBBP4-215ENST00000524393 SLIT3O75094 1523 aa17.75■□□□□ 0.43
RBBP4-215ENST00000524393 SF3B2Q13435 895 aaKnown RBP17.74■□□□□ 0.43
RBBP4-215ENST00000524393 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
RBBP4-215ENST00000524393 TIMELESSQ9UNS1 1208 aa17.74■□□□□ 0.43
RBBP4-215ENST00000524393 MON2Q7Z3U7 1717 aa17.74■□□□□ 0.43
RBBP4-215ENST00000524393 LMO7Q8WWI1 1683 aa17.74■□□□□ 0.43
RBBP4-215ENST00000524393 SPATA31A1Q5TZJ5 1347 aa17.73■□□□□ 0.43
RBBP4-215ENST00000524393 BLMP54132 1417 aaPredicted RBP17.73■□□□□ 0.43
RBBP4-215ENST00000524393 KCNH5Q8NCM2 988 aa17.73■□□□□ 0.43
RBBP4-215ENST00000524393 PUS7Q96PZ0 661 aaKnown RBP17.73■□□□□ 0.43
RBBP4-215ENST00000524393 CAMTA1Q9Y6Y1 1673 aa17.72■□□□□ 0.43
RBBP4-215ENST00000524393 ST20-MTHFSA0A0A6YYL1 179 aa17.72■□□□□ 0.43
RBBP4-215ENST00000524393 TERF2IPQ9NYB0 399 aa17.72■□□□□ 0.43
RBBP4-215ENST00000524393 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.43
RBBP4-215ENST00000524393 USP35Q9P2H5 1018 aa17.71■□□□□ 0.43
RBBP4-215ENST00000524393 AATKQ6ZMQ8 1374 aa17.69■□□□□ 0.42
RBBP4-215ENST00000524393 NINLQ9Y2I6 1382 aa17.69■□□□□ 0.42
RBBP4-215ENST00000524393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
RBBP4-215ENST00000524393 COL5A2P05997 1499 aaPredicted RBP17.69■□□□□ 0.42
RBBP4-215ENST00000524393 USP47Q96K76 1375 aa17.68■□□□□ 0.42
RBBP4-215ENST00000524393 LARP1Q6PKG0 1096 aaKnown RBP17.68■□□□□ 0.42
RBBP4-215ENST00000524393 TESK2Q96S53 571 aa17.68■□□□□ 0.42
RBBP4-215ENST00000524393 SLC12A5Q9H2X9 1139 aa17.68■□□□□ 0.42
RBBP4-215ENST00000524393 EDC4Q6P2E9 1401 aaKnown RBP17.67■□□□□ 0.42
RBBP4-215ENST00000524393 SOX12O15370 315 aa17.67■□□□□ 0.42
RBBP4-215ENST00000524393 BARGINQ6ZT62 677 aa17.67■□□□□ 0.42
RBBP4-215ENST00000524393 TCP11L2Q8N4U5 519 aa17.67■□□□□ 0.42
RBBP4-215ENST00000524393 THRAP3Q9Y2W1 955 aaKnown RBP17.67■□□□□ 0.42
RBBP4-215ENST00000524393 CD163L1Q9NR16 1453 aa17.67■□□□□ 0.42
RBBP4-215ENST00000524393 CRB1P82279 1406 aa17.66■□□□□ 0.42
RBBP4-215ENST00000524393 TMF1P82094 1093 aa17.66■□□□□ 0.42
RBBP4-215ENST00000524393 A0A1W2PP64 1363 aa17.66■□□□□ 0.42
RBBP4-215ENST00000524393 CCER1Q8TC90 406 aaPredicted RBP17.65■□□□□ 0.42
RBBP4-215ENST00000524393 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
RBBP4-215ENST00000524393 USP31Q70CQ4 1352 aa17.65■□□□□ 0.42
RBBP4-215ENST00000524393 USP54Q70EL1 1684 aa17.64■□□□□ 0.42
RBBP4-215ENST00000524393 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
RBBP4-215ENST00000524393 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms