RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 PLEKHG5O94827 1062 aa18.08■□□□□ 0.48
HDAC2-217ENST00000524334 RBM6P78332 1123 aaKnown RBP18.08■□□□□ 0.48
HDAC2-217ENST00000524334 PUS7Q96PZ0 661 aaKnown RBP18.08■□□□□ 0.48
HDAC2-217ENST00000524334 TRPC5Q9UL62 973 aaPredicted RBP18.08■□□□□ 0.48
HDAC2-217ENST00000524334 QRICH2Q9H0J4 1663 aa18.07■□□□□ 0.48
HDAC2-217ENST00000524334 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
HDAC2-217ENST00000524334 ABTB2Q8N961 1025 aa18.06■□□□□ 0.48
HDAC2-217ENST00000524334 ITSN1Q15811 1721 aa18.05■□□□□ 0.48
HDAC2-217ENST00000524334 NLRP13Q86W25 1043 aa18.04■□□□□ 0.48
HDAC2-217ENST00000524334 UNC5CLQ8IV45 518 aa18.04■□□□□ 0.48
HDAC2-217ENST00000524334 TESK2Q96S53 571 aa18.04■□□□□ 0.48
HDAC2-217ENST00000524334 FAM83GA6ND36 823 aa18.03■□□□□ 0.48
HDAC2-217ENST00000524334 BCL9LQ86UU0 1499 aa18.02■□□□□ 0.48
HDAC2-217ENST00000524334 USP6P35125 1406 aa18.01■□□□□ 0.47
HDAC2-217ENST00000524334 NUTM2GQ5VZR2 741 aa18.01■□□□□ 0.47
HDAC2-217ENST00000524334 TOPAZ1Q8N9V7 1692 aa18.01■□□□□ 0.47
HDAC2-217ENST00000524334 USP47Q96K76 1375 aa18.01■□□□□ 0.47
HDAC2-217ENST00000524334 CDK12Q9NYV4 1490 aaPredicted RBP18.01■□□□□ 0.47
HDAC2-217ENST00000524334 TRPM3Q9HCF6 1732 aaPredicted RBP18.01■□□□□ 0.47
HDAC2-217ENST00000524334 TMC1Q8TDI8 760 aa18■□□□□ 0.47
HDAC2-217ENST00000524334 GJD4Q96KN9 370 aaPredicted RBP18■□□□□ 0.47
HDAC2-217ENST00000524334 ATRNO75882 1429 aa17.99■□□□□ 0.47
HDAC2-217ENST00000524334 SLIT2O94813 1529 aa17.99■□□□□ 0.47
HDAC2-217ENST00000524334 TMF1P82094 1093 aa17.99■□□□□ 0.47
HDAC2-217ENST00000524334 TERF2IPQ9NYB0 399 aa17.99■□□□□ 0.47
HDAC2-217ENST00000524334 NLRP6P59044 892 aa17.98■□□□□ 0.47
HDAC2-217ENST00000524334 CDCA8Q53HL2 280 aa17.98■□□□□ 0.47
HDAC2-217ENST00000524334 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
HDAC2-217ENST00000524334 PRDM11Q9NQV5 511 aa17.98■□□□□ 0.47
HDAC2-217ENST00000524334 CPSF1Q10570 1443 aaKnown RBP17.98■□□□□ 0.47
HDAC2-217ENST00000524334 ALS2Q96Q42 1657 aa17.97■□□□□ 0.47
HDAC2-217ENST00000524334 KTN1Q86UP2 1357 aaKnown RBP17.97■□□□□ 0.47
HDAC2-217ENST00000524334 GCP02774 474 aa17.97■□□□□ 0.47
HDAC2-217ENST00000524334 VPS72Q15906 364 aa17.97■□□□□ 0.47
HDAC2-217ENST00000524334 SLC12A5Q9H2X9 1139 aa17.97■□□□□ 0.47
HDAC2-217ENST00000524334 BTG4Q9NY30 223 aa17.97■□□□□ 0.47
HDAC2-217ENST00000524334 SSH2Q76I76 1423 aa17.97■□□□□ 0.47
HDAC2-217ENST00000524334 USP19O94966 1318 aa17.97■□□□□ 0.47
HDAC2-217ENST00000524334 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
HDAC2-217ENST00000524334 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
HDAC2-217ENST00000524334 ZC3H6P61129 1189 aaKnown RBP17.95■□□□□ 0.46
HDAC2-217ENST00000524334 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
HDAC2-217ENST00000524334 NINLQ9Y2I6 1382 aa17.94■□□□□ 0.46
HDAC2-217ENST00000524334 CCDC9Q9Y3X0 531 aaKnown RBP17.94■□□□□ 0.46
HDAC2-217ENST00000524334 CPDO75976 1380 aa17.92■□□□□ 0.46
HDAC2-217ENST00000524334 KCNH5Q8NCM2 988 aa17.92■□□□□ 0.46
HDAC2-217ENST00000524334 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.46
HDAC2-217ENST00000524334 CHRNA2Q15822 529 aa17.91■□□□□ 0.46
HDAC2-217ENST00000524334 MARF1Q9Y4F3 1742 aaKnown RBP17.9■□□□□ 0.46
HDAC2-217ENST00000524334 ONECUT3O60422 494 aaPredicted RBP17.9■□□□□ 0.46
HDAC2-217ENST00000524334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.9■□□□□ 0.46
HDAC2-217ENST00000524334 RGS12O14924 1447 aa17.89■□□□□ 0.46
HDAC2-217ENST00000524334 EVA1CP58658 441 aa17.89■□□□□ 0.45
HDAC2-217ENST00000524334 EDC4Q6P2E9 1401 aaKnown RBP17.88■□□□□ 0.45
HDAC2-217ENST00000524334 CD163L1Q9NR16 1453 aa17.88■□□□□ 0.45
HDAC2-217ENST00000524334 ABCA3Q99758 1704 aa17.87■□□□□ 0.45
HDAC2-217ENST00000524334 A0A1W2PP64 1363 aa17.87■□□□□ 0.45
HDAC2-217ENST00000524334 COL14A1Q05707 1796 aaKnown RBP17.86■□□□□ 0.45
HDAC2-217ENST00000524334 USP31Q70CQ4 1352 aa17.86■□□□□ 0.45
HDAC2-217ENST00000524334 SPATA31A5Q5VU36 1347 aa17.85■□□□□ 0.45
HDAC2-217ENST00000524334 AATKQ6ZMQ8 1374 aa17.85■□□□□ 0.45
HDAC2-217ENST00000524334 NME9Q86XW9 330 aa17.85■□□□□ 0.45
HDAC2-217ENST00000524334 SPATA31A7Q8IWB4 1347 aa17.85■□□□□ 0.45
HDAC2-217ENST00000524334 UPF1Q92900 1129 aaKnown RBP eCLIP17.85■□□□□ 0.45
HDAC2-217ENST00000524334 STRN4Q9NRL3 753 aa17.85■□□□□ 0.45
HDAC2-217ENST00000524334 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.84■□□□□ 0.45
HDAC2-217ENST00000524334 NWD2Q9ULI1 1742 aa17.84■□□□□ 0.45
HDAC2-217ENST00000524334 ANKRD36BQ8N2N9 1353 aa17.84■□□□□ 0.45
HDAC2-217ENST00000524334 HSPA5P11021 654 aaKnown RBP17.84■□□□□ 0.45
HDAC2-217ENST00000524334 ARHGEF25Q86VW2 580 aa17.84■□□□□ 0.45
HDAC2-217ENST00000524334 SEPT12Q8IYM1 358 aa17.84■□□□□ 0.45
HDAC2-217ENST00000524334 ZBTB7CA1YPR0 619 aa17.83■□□□□ 0.44
HDAC2-217ENST00000524334 CRYBG1Q9Y4K1 1723 aa17.83■□□□□ 0.44
HDAC2-217ENST00000524334 SLIT3O75094 1523 aa17.82■□□□□ 0.44
HDAC2-217ENST00000524334 SPATA31A1Q5TZJ5 1347 aa17.82■□□□□ 0.44
HDAC2-217ENST00000524334 FAM98CQ17RN3 349 aaKnown RBP17.82■□□□□ 0.44
HDAC2-217ENST00000524334 ZRANB1Q9UGI0 708 aa17.82■□□□□ 0.44
HDAC2-217ENST00000524334 PHRF1Q9P1Y6 1649 aaKnown RBP17.82■□□□□ 0.44
HDAC2-217ENST00000524334 NRKQ7Z2Y5 1582 aa17.82■□□□□ 0.44
HDAC2-217ENST00000524334 PLCH1Q4KWH8 1693 aa17.81■□□□□ 0.44
HDAC2-217ENST00000524334 A0A0G2JS52 829 aa17.81■□□□□ 0.44
HDAC2-217ENST00000524334 SOX12O15370 315 aa17.81■□□□□ 0.44
HDAC2-217ENST00000524334 MYT1Q01538 1121 aa17.81■□□□□ 0.44
HDAC2-217ENST00000524334 GLI3P10071 1580 aa17.8■□□□□ 0.44
HDAC2-217ENST00000524334 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
HDAC2-217ENST00000524334 COG3Q96JB2 828 aa17.8■□□□□ 0.44
HDAC2-217ENST00000524334 PIK3C2AO00443 1686 aa17.8■□□□□ 0.44
HDAC2-217ENST00000524334 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
HDAC2-217ENST00000524334 KRT27Q7Z3Y8 459 aa17.79■□□□□ 0.44
HDAC2-217ENST00000524334 CCDC125Q86Z20 511 aa17.79■□□□□ 0.44
HDAC2-217ENST00000524334 THRAP3Q9Y2W1 955 aaKnown RBP17.79■□□□□ 0.44
HDAC2-217ENST00000524334 CAMTA1Q9Y6Y1 1673 aa17.79■□□□□ 0.44
HDAC2-217ENST00000524334 BARGINQ6ZT62 677 aa17.78■□□□□ 0.44
HDAC2-217ENST00000524334 TCP11L2Q8N4U5 519 aa17.77■□□□□ 0.44
HDAC2-217ENST00000524334 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
HDAC2-217ENST00000524334 AXIN2Q9Y2T1 843 aa17.77■□□□□ 0.44
HDAC2-217ENST00000524334 MON2Q7Z3U7 1717 aa17.76■□□□□ 0.43
HDAC2-217ENST00000524334 FYB1O15117 783 aa17.76■□□□□ 0.43
HDAC2-217ENST00000524334 TOM1L2Q6ZVM7 507 aa17.75■□□□□ 0.43
HDAC2-217ENST00000524334 POLR3GLQ9BT43 218 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms