RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	TECPR2	O15040	1411 aa		14.14	□□□□□ -0.15
SPIDR-222	ENST00000524006	RNF123	Q5XPI4	1314 aa		14.14	□□□□□ -0.15
SPIDR-222	ENST00000524006	NWD1	Q149M9	1564 aa		14.13	□□□□□ -0.15
SPIDR-222	ENST00000524006	PLEKHG1	Q9ULL1	1385 aa		14.13	□□□□□ -0.15
SPIDR-222	ENST00000524006	GOLGA2	Q08379	1002 aa		14.13	□□□□□ -0.15
SPIDR-222	ENST00000524006	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	14.13	□□□□□ -0.15
SPIDR-222	ENST00000524006	NKTR	P30414	1462 aa	Known RBP	14.12	□□□□□ -0.15
SPIDR-222	ENST00000524006	ROBO1	Q9Y6N7	1651 aa		14.11	□□□□□ -0.15
SPIDR-222	ENST00000524006	PPIP5K1	Q6PFW1	1433 aa		14.11	□□□□□ -0.15
SPIDR-222	ENST00000524006	POTEA	Q6S8J7	498 aa		14.11	□□□□□ -0.15
SPIDR-222	ENST00000524006	PLEKHH1	Q9ULM0	1364 aa		14.1	□□□□□ -0.15
SPIDR-222	ENST00000524006	B4GALNT3	Q6L9W6	998 aa		14.1	□□□□□ -0.15
SPIDR-222	ENST00000524006	TSHZ2	Q9NRE2	1034 aa		14.1	□□□□□ -0.15
SPIDR-222	ENST00000524006	CD163L1	Q9NR16	1453 aa		14.1	□□□□□ -0.15
SPIDR-222	ENST00000524006	MET	P08581	1390 aa		14.09	□□□□□ -0.15
SPIDR-222	ENST00000524006	EDC4	Q6P2E9	1401 aa	Known RBP	14.09	□□□□□ -0.15
SPIDR-222	ENST00000524006	MTHFS	P49914	203 aa		14.09	□□□□□ -0.15
SPIDR-222	ENST00000524006	RUNDC1	Q96C34	613 aa		14.09	□□□□□ -0.15
SPIDR-222	ENST00000524006	CDCA7L	Q96GN5	454 aa		14.09	□□□□□ -0.15
SPIDR-222	ENST00000524006	SLAIN2	Q9P270	581 aa		14.09	□□□□□ -0.15
SPIDR-222	ENST00000524006	MSH6	P52701	1360 aa		14.09	□□□□□ -0.15
SPIDR-222	ENST00000524006	FMN2	Q9NZ56	1722 aa		14.08	□□□□□ -0.16
SPIDR-222	ENST00000524006	APAF1	O14727	1248 aa		14.08	□□□□□ -0.16
SPIDR-222	ENST00000524006	WAPL	Q7Z5K2	1190 aa		14.08	□□□□□ -0.16
SPIDR-222	ENST00000524006	MAPK8IP3	Q9UPT6	1336 aa		14.08	□□□□□ -0.16
SPIDR-222	ENST00000524006	XRN1	Q8IZH2	1706 aa	Known RBP	14.07	□□□□□ -0.16
SPIDR-222	ENST00000524006	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	14.07	□□□□□ -0.16
SPIDR-222	ENST00000524006		E9PSI1	815 aa		14.07	□□□□□ -0.16
SPIDR-222	ENST00000524006	WASL	O00401	505 aa	Predicted RBP	14.07	□□□□□ -0.16
SPIDR-222	ENST00000524006	NEFM	P07197	916 aa		14.07	□□□□□ -0.16
SPIDR-222	ENST00000524006	SIRT1	Q96EB6	747 aa		14.07	□□□□□ -0.16
SPIDR-222	ENST00000524006	PNN	Q9H307	717 aa	Known RBP	14.07	□□□□□ -0.16
SPIDR-222	ENST00000524006	GGNBP2	Q9H3C7	697 aa		14.07	□□□□□ -0.16
SPIDR-222	ENST00000524006	TBX22	Q9Y458	520 aa		14.07	□□□□□ -0.16
SPIDR-222	ENST00000524006	NRK	Q7Z2Y5	1582 aa		14.07	□□□□□ -0.16
SPIDR-222	ENST00000524006	RGPD8	O14715	1765 aa	Predicted RBP	14.06	□□□□□ -0.16
SPIDR-222	ENST00000524006	CABP1	Q9NZU7	370 aa		14.06	□□□□□ -0.16
SPIDR-222	ENST00000524006	ADAMTS13	Q76LX8	1427 aa		14.06	□□□□□ -0.16
SPIDR-222	ENST00000524006	U2AF1L5	P0DN76	240 aa	Predicted RBP	14.05	□□□□□ -0.16
SPIDR-222	ENST00000524006	U2AF1	Q01081	240 aa	Known RBP eCLIP	14.05	□□□□□ -0.16
SPIDR-222	ENST00000524006	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.05	□□□□□ -0.16
SPIDR-222	ENST00000524006	CHD2	O14647	1828 aa	Known RBP	14.04	□□□□□ -0.16
SPIDR-222	ENST00000524006	U2SURP	O15042	1029 aa	Known RBP	14.04	□□□□□ -0.16
SPIDR-222	ENST00000524006	PPP4R3CP	Q6ZMV5	832 aa		14.04	□□□□□ -0.16
SPIDR-222	ENST00000524006	COL3A1	P02461	1466 aa	Predicted RBP	14.04	□□□□□ -0.16
SPIDR-222	ENST00000524006	CANX	P27824	592 aa	Known RBP	14.03	□□□□□ -0.16
SPIDR-222	ENST00000524006	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	14.03	□□□□□ -0.16	3e-6	■■■□□ 16.7
SPIDR-222	ENST00000524006	ZNF521	Q96K83	1311 aa		14.03	□□□□□ -0.16
SPIDR-222	ENST00000524006	JCAD	Q9P266	1359 aa		14.03	□□□□□ -0.16
SPIDR-222	ENST00000524006	PTCH1	Q13635	1447 aa		14.03	□□□□□ -0.16
SPIDR-222	ENST00000524006	NALCN	Q8IZF0	1738 aa		14.03	□□□□□ -0.16
SPIDR-222	ENST00000524006	CDK12	Q9NYV4	1490 aa	Predicted RBP	14.02	□□□□□ -0.16
SPIDR-222	ENST00000524006	NCOA3	Q9Y6Q9	1424 aa		14.02	□□□□□ -0.16
SPIDR-222	ENST00000524006	SLFN5	Q08AF3	891 aa		14.02	□□□□□ -0.17
SPIDR-222	ENST00000524006	DUSP27	Q5VZP5	1158 aa		14.01	□□□□□ -0.17
SPIDR-222	ENST00000524006	NUDT16	Q96DE0	195 aa	Known RBP	14.01	□□□□□ -0.17
SPIDR-222	ENST00000524006	DLG5	Q8TDM6	1919 aa		14.01	□□□□□ -0.17
SPIDR-222	ENST00000524006	PHLPP1	O60346	1717 aa		14.01	□□□□□ -0.17
SPIDR-222	ENST00000524006	CPSF1	Q10570	1443 aa	Known RBP	14	□□□□□ -0.17
SPIDR-222	ENST00000524006	ROBO2	Q9HCK4	1378 aa		14	□□□□□ -0.17
SPIDR-222	ENST00000524006	FYB1	O15117	783 aa		14	□□□□□ -0.17
SPIDR-222	ENST00000524006	DIAPH1	O60610	1272 aa	Known RBP	14	□□□□□ -0.17
SPIDR-222	ENST00000524006	NEUROD2	Q15784	382 aa		14	□□□□□ -0.17
SPIDR-222	ENST00000524006	MYH16	Q9H6N6	1097 aa		14	□□□□□ -0.17
SPIDR-222	ENST00000524006	COL16A1	Q07092	1604 aa	Predicted RBP	14	□□□□□ -0.17
SPIDR-222	ENST00000524006	PTPRU	Q92729	1446 aa		13.99	□□□□□ -0.17
SPIDR-222	ENST00000524006	PIK3R4	Q99570	1358 aa		13.99	□□□□□ -0.17
SPIDR-222	ENST00000524006	TCP11L2	Q8N4U5	519 aa		13.99	□□□□□ -0.17
SPIDR-222	ENST00000524006	EXOC6	Q8TAG9	804 aa		13.99	□□□□□ -0.17
SPIDR-222	ENST00000524006	COG3	Q96JB2	828 aa		13.99	□□□□□ -0.17
SPIDR-222	ENST00000524006	CCDC61	Q9Y6R9	512 aa		13.99	□□□□□ -0.17
SPIDR-222	ENST00000524006	LRP6	O75581	1613 aa		13.98	□□□□□ -0.17
SPIDR-222	ENST00000524006	PPM1G	O15355	546 aa	Predicted RBP	13.98	□□□□□ -0.17
SPIDR-222	ENST00000524006	C14orf37	Q86TY3	774 aa		13.98	□□□□□ -0.17
SPIDR-222	ENST00000524006	CADPS2	Q86UW7	1296 aa		13.98	□□□□□ -0.17
SPIDR-222	ENST00000524006	C19orf44	Q9H6X5	657 aa		13.98	□□□□□ -0.17
SPIDR-222	ENST00000524006	RRP7A	Q9Y3A4	280 aa	Known RBP	13.98	□□□□□ -0.17
SPIDR-222	ENST00000524006	WDR63	Q8IWG1	891 aa		13.97	□□□□□ -0.17
SPIDR-222	ENST00000524006	WWC1	Q8IX03	1113 aa		13.97	□□□□□ -0.17
SPIDR-222	ENST00000524006	ZNF692	Q9BU19	519 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIDR-222	ENST00000524006	AMOTL2	Q9Y2J4	779 aa		13.97	□□□□□ -0.17
SPIDR-222	ENST00000524006	ATF3	P18847	181 aa		13.96	□□□□□ -0.17
SPIDR-222	ENST00000524006	CCDC27	Q2M243	656 aa		13.96	□□□□□ -0.17
SPIDR-222	ENST00000524006	NCBP3	Q53F19	620 aa	Known RBP	13.96	□□□□□ -0.17
SPIDR-222	ENST00000524006	CRBN	Q96SW2	442 aa		13.96	□□□□□ -0.17
SPIDR-222	ENST00000524006	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.96	□□□□□ -0.17
SPIDR-222	ENST00000524006	SPATA31A6	Q5VVP1	1343 aa		13.95	□□□□□ -0.18
SPIDR-222	ENST00000524006	PLIN1	O60240	522 aa		13.95	□□□□□ -0.18
SPIDR-222	ENST00000524006	SRCAP	Q6ZRS2	3230 aa		13.94	□□□□□ -0.18
SPIDR-222	ENST00000524006	BRINP3	Q76B58	766 aa		13.94	□□□□□ -0.18
SPIDR-222	ENST00000524006	AATK	Q6ZMQ8	1374 aa		13.94	□□□□□ -0.18
SPIDR-222	ENST00000524006	ANKAR	Q7Z5J8	1434 aa		13.93	□□□□□ -0.18
SPIDR-222	ENST00000524006	VIRMA	Q69YN4	1812 aa	Known RBP	13.93	□□□□□ -0.18
SPIDR-222	ENST00000524006	NME9	Q86XW9	330 aa		13.93	□□□□□ -0.18
SPIDR-222	ENST00000524006	USP6	P35125	1406 aa		13.92	□□□□□ -0.18
SPIDR-222	ENST00000524006	TRMT2A	Q8IZ69	625 aa	Known RBP	13.92	□□□□□ -0.18
SPIDR-222	ENST00000524006	RBM19	Q9Y4C8	960 aa	Known RBP	13.92	□□□□□ -0.18
SPIDR-222	ENST00000524006	USP54	Q70EL1	1684 aa		13.91	□□□□□ -0.18
SPIDR-222	ENST00000524006	CALD1	Q05682	793 aa	Known RBP	13.91	□□□□□ -0.18
SPIDR-222	ENST00000524006	MEX3C	Q5U5Q3	659 aa	Known RBP	13.91	□□□□□ -0.18

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