RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 CARD11Q9BXL7 1154 aa24.53■■□□□ 1.52
CCNC-213ENST00000523541 CLSPNQ9HAW4 1339 aa24.53■■□□□ 1.52
CCNC-213ENST00000523541 GJD4Q96KN9 370 aaPredicted RBP24.52■■□□□ 1.52
CCNC-213ENST00000523541 CABP2Q9NPB3 220 aa24.52■■□□□ 1.52
CCNC-213ENST00000523541 TIMELESSQ9UNS1 1208 aa24.52■■□□□ 1.52
CCNC-213ENST00000523541 ABCA3Q99758 1704 aa24.51■■□□□ 1.51
CCNC-213ENST00000523541 SLIT2O94813 1529 aa24.51■■□□□ 1.51
CCNC-213ENST00000523541 QRICH2Q9H0J4 1663 aa24.5■■□□□ 1.51
CCNC-213ENST00000523541 SLC24A1O60721 1099 aa24.49■■□□□ 1.51
CCNC-213ENST00000523541 SBNO2Q9Y2G9 1366 aa24.49■■□□□ 1.51
CCNC-213ENST00000523541 ALS2Q96Q42 1657 aa24.49■■□□□ 1.51
CCNC-213ENST00000523541 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.49■■□□□ 1.51
CCNC-213ENST00000523541 PPIP5K1Q6PFW1 1433 aa24.48■■□□□ 1.51
CCNC-213ENST00000523541 ATAD2Q6PL18 1390 aa24.48■■□□□ 1.51
CCNC-213ENST00000523541 RALGAPBQ86X10 1494 aa24.48■■□□□ 1.51
CCNC-213ENST00000523541 PLCH1Q4KWH8 1693 aa24.47■■□□□ 1.51
CCNC-213ENST00000523541 CABP1Q9NZU7 370 aa24.47■■□□□ 1.51
CCNC-213ENST00000523541 TOPAZ1Q8N9V7 1692 aa24.46■■□□□ 1.51
CCNC-213ENST00000523541 FAM83GA6ND36 823 aa24.46■■□□□ 1.51
CCNC-213ENST00000523541 NUTM2GQ5VZR2 741 aa24.46■■□□□ 1.51
CCNC-213ENST00000523541 ZNF692Q9BU19 519 aaPredicted RBP24.46■■□□□ 1.51
CCNC-213ENST00000523541 A0A0G2JS52 829 aa24.44■■□□□ 1.5
CCNC-213ENST00000523541 MYT1Q01538 1121 aa24.44■■□□□ 1.5
CCNC-213ENST00000523541 VPS72Q15906 364 aa24.44■■□□□ 1.5
CCNC-213ENST00000523541 ABTB2Q8N961 1025 aa24.43■■□□□ 1.5
CCNC-213ENST00000523541 PUS7Q96PZ0 661 aaKnown RBP24.43■■□□□ 1.5
CCNC-213ENST00000523541 PRDM11Q9NQV5 511 aa24.43■■□□□ 1.5
CCNC-213ENST00000523541 BTG4Q9NY30 223 aa24.43■■□□□ 1.5
CCNC-213ENST00000523541 NWD2Q9ULI1 1742 aa24.43■■□□□ 1.5
CCNC-213ENST00000523541 NLRP13Q86W25 1043 aa24.41■■□□□ 1.5
CCNC-213ENST00000523541 PCGF6Q9BYE7 350 aa24.4■■□□□ 1.5
CCNC-213ENST00000523541 GLI3P10071 1580 aa24.4■■□□□ 1.5
CCNC-213ENST00000523541 COL14A1Q05707 1796 aaKnown RBP24.39■■□□□ 1.5
CCNC-213ENST00000523541 ONECUT3O60422 494 aaPredicted RBP24.37■■□□□ 1.49
CCNC-213ENST00000523541 USP6P35125 1406 aa24.36■■□□□ 1.49
CCNC-213ENST00000523541 ZC3H6P61129 1189 aaKnown RBP24.36■■□□□ 1.49
CCNC-213ENST00000523541 SEPT12Q8IYM1 358 aa24.36■■□□□ 1.49
CCNC-213ENST00000523541 CRYBG1Q9Y4K1 1723 aa24.35■■□□□ 1.49
CCNC-213ENST00000523541 USP19O94966 1318 aa24.35■■□□□ 1.49
CCNC-213ENST00000523541 KIAA0232Q92628 1395 aa24.34■■□□□ 1.49
CCNC-213ENST00000523541 CHRNA2Q15822 529 aa24.34■■□□□ 1.49
CCNC-213ENST00000523541 PHRF1Q9P1Y6 1649 aaKnown RBP24.34■■□□□ 1.49
CCNC-213ENST00000523541 SSH2Q76I76 1423 aa24.34■■□□□ 1.49
CCNC-213ENST00000523541 CPDO75976 1380 aa24.32■■□□□ 1.48
CCNC-213ENST00000523541 GCP02774 474 aa24.32■■□□□ 1.48
CCNC-213ENST00000523541 FAM98CQ17RN3 349 aaKnown RBP24.32■■□□□ 1.48
CCNC-213ENST00000523541 STRN4Q9NRL3 753 aa24.32■■□□□ 1.48
CCNC-213ENST00000523541 NRAPQ86VF7 1730 aa24.32■■□□□ 1.48
CCNC-213ENST00000523541 TTC21AQ8NDW8 1320 aa24.32■■□□□ 1.48
CCNC-213ENST00000523541 ZBTB7CA1YPR0 619 aa24.31■■□□□ 1.48
CCNC-213ENST00000523541 CPSF1Q10570 1443 aaKnown RBP24.31■■□□□ 1.48
CCNC-213ENST00000523541 ST20-MTHFSA0A0A6YYL1 179 aa24.3■■□□□ 1.48
CCNC-213ENST00000523541 EVA1CP58658 441 aa24.3■■□□□ 1.48
CCNC-213ENST00000523541 NLRP6P59044 892 aa24.3■■□□□ 1.48
CCNC-213ENST00000523541 CCDC125Q86Z20 511 aa24.29■■□□□ 1.48
CCNC-213ENST00000523541 TESK2Q96S53 571 aa24.29■■□□□ 1.48
CCNC-213ENST00000523541 TTC21BQ7Z4L5 1316 aa24.29■■□□□ 1.48
CCNC-213ENST00000523541 BRWD3Q6RI45 1802 aa24.27■■□□□ 1.48
CCNC-213ENST00000523541 KRT27Q7Z3Y8 459 aa24.27■■□□□ 1.48
CCNC-213ENST00000523541 SF3B2Q13435 895 aaKnown RBP24.26■■□□□ 1.47
CCNC-213ENST00000523541 SPATA31A5Q5VU36 1347 aa24.26■■□□□ 1.47
CCNC-213ENST00000523541 SPATA31A7Q8IWB4 1347 aa24.26■■□□□ 1.47
CCNC-213ENST00000523541 KTN1Q86UP2 1357 aaKnown RBP24.26■■□□□ 1.47
CCNC-213ENST00000523541 NRKQ7Z2Y5 1582 aa24.25■■□□□ 1.47
CCNC-213ENST00000523541 HDGFL2Q7Z4V5 671 aaPredicted RBP24.25■■□□□ 1.47
CCNC-213ENST00000523541 KCNH5Q8NCM2 988 aa24.25■■□□□ 1.47
CCNC-213ENST00000523541 TERF2IPQ9NYB0 399 aa24.25■■□□□ 1.47
CCNC-213ENST00000523541 NINLQ9Y2I6 1382 aa24.25■■□□□ 1.47
CCNC-213ENST00000523541 USP35Q9P2H5 1018 aa24.24■■□□□ 1.47
CCNC-213ENST00000523541 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
CCNC-213ENST00000523541 TMC1Q8TDI8 760 aa24.23■■□□□ 1.47
CCNC-213ENST00000523541 EP400Q96L91 3159 aa24.22■■□□□ 1.47
CCNC-213ENST00000523541 TMF1P82094 1093 aa24.21■■□□□ 1.47
CCNC-213ENST00000523541 CDCA8Q53HL2 280 aa24.21■■□□□ 1.47
CCNC-213ENST00000523541 SLC12A5Q9H2X9 1139 aa24.21■■□□□ 1.47
CCNC-213ENST00000523541 USP47Q96K76 1375 aa24.2■■□□□ 1.46
CCNC-213ENST00000523541 SPATA31A1Q5TZJ5 1347 aa24.2■■□□□ 1.46
CCNC-213ENST00000523541 BLMP54132 1417 aaPredicted RBP24.19■■□□□ 1.46
CCNC-213ENST00000523541 AATKQ6ZMQ8 1374 aa24.19■■□□□ 1.46
CCNC-213ENST00000523541 SOX12O15370 315 aa24.19■■□□□ 1.46
CCNC-213ENST00000523541 SLIT3O75094 1523 aa24.19■■□□□ 1.46
CCNC-213ENST00000523541 AKAP12Q02952 1782 aa24.18■■□□□ 1.46
CCNC-213ENST00000523541 USP31Q70CQ4 1352 aa24.17■■□□□ 1.46
CCNC-213ENST00000523541 THRAP3Q9Y2W1 955 aaKnown RBP24.17■■□□□ 1.46
CCNC-213ENST00000523541 PIK3C2AO00443 1686 aa24.16■■□□□ 1.46
CCNC-213ENST00000523541 CD163L1Q9NR16 1453 aa24.16■■□□□ 1.46
CCNC-213ENST00000523541 BARGINQ6ZT62 677 aa24.16■■□□□ 1.46
CCNC-213ENST00000523541 LARP1Q6PKG0 1096 aaKnown RBP24.15■■□□□ 1.46
CCNC-213ENST00000523541 ARHGEF25Q86VW2 580 aa24.15■■□□□ 1.46
CCNC-213ENST00000523541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.15■■□□□ 1.46
CCNC-213ENST00000523541 ZRANB1Q9UGI0 708 aa24.15■■□□□ 1.46
CCNC-213ENST00000523541 EDC4Q6P2E9 1401 aaKnown RBP24.15■■□□□ 1.46
CCNC-213ENST00000523541 CAMTA1Q9Y6Y1 1673 aa24.15■■□□□ 1.46
CCNC-213ENST00000523541 FAM182BQ5T319 152 aa24.14■■□□□ 1.45
CCNC-213ENST00000523541 DEFB132Q7Z7B7 95 aa24.12■■□□□ 1.45
CCNC-213ENST00000523541 TCP11L2Q8N4U5 519 aa24.12■■□□□ 1.45
CCNC-213ENST00000523541 LMO7Q8WWI1 1683 aa24.11■■□□□ 1.45
CCNC-213ENST00000523541 MON2Q7Z3U7 1717 aa24.11■■□□□ 1.45
CCNC-213ENST00000523541 A0A1W2PP64 1363 aa24.11■■□□□ 1.45
CCNC-213ENST00000523541 PDE3BQ13370 1112 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms