RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 MYT1Q01538 1121 aa33.55■■■□□ 2.96
PVT1-218ENST00000523328 WASLO00401 505 aaPredicted RBP33.53■■■□□ 2.96
PVT1-218ENST00000523328 BAG6P46379 1132 aa33.51■■■□□ 2.95
PVT1-218ENST00000523328 KDM2AQ9Y2K7 1162 aa33.5■■■□□ 2.95
PVT1-218ENST00000523328 RGPD1P0DJD0 1748 aa33.49■■■□□ 2.95
PVT1-218ENST00000523328 SPATA31A5Q5VU36 1347 aa33.49■■■□□ 2.95
PVT1-218ENST00000523328 SPATA31A7Q8IWB4 1347 aa33.49■■■□□ 2.95
PVT1-218ENST00000523328 THSD7AQ9UPZ6 1657 aa33.48■■■□□ 2.95
PVT1-218ENST00000523328 DCAF11Q8TEB1 546 aa33.48■■■□□ 2.95
PVT1-218ENST00000523328 ARHGEF28Q8N1W1 1705 aaKnown RBP33.48■■■□□ 2.95
PVT1-218ENST00000523328 ITSN1Q15811 1721 aa33.47■■■□□ 2.95
PVT1-218ENST00000523328 NGDNQ8NEJ9 315 aaKnown RBP33.46■■■□□ 2.95
PVT1-218ENST00000523328 ATP7BP35670 1465 aa33.44■■■□□ 2.94
PVT1-218ENST00000523328 PSDA5PKW4 1024 aaPredicted RBP33.43■■■□□ 2.94
PVT1-218ENST00000523328 PAK3O75914 559 aaPredicted RBP33.43■■■□□ 2.94
PVT1-218ENST00000523328 FAM182BQ5T319 152 aa33.43■■■□□ 2.94
PVT1-218ENST00000523328 STAC3Q96MF2 364 aa33.42■■■□□ 2.94
PVT1-218ENST00000523328 PRDM11Q9NQV5 511 aa33.42■■■□□ 2.94
PVT1-218ENST00000523328 TNS1Q9HBL0 1735 aaKnown RBP33.42■■■□□ 2.94
PVT1-218ENST00000523328 PHRF1Q9P1Y6 1649 aaKnown RBP33.4■■■□□ 2.94
PVT1-218ENST00000523328 HRCP23327 699 aa33.4■■■□□ 2.94
PVT1-218ENST00000523328 EN1Q05925 392 aaPredicted RBP33.4■■■□□ 2.94
PVT1-218ENST00000523328 DISP2A7MBM2 1401 aa33.38■■■□□ 2.93
PVT1-218ENST00000523328 KIAA0232Q92628 1395 aa33.37■■■□□ 2.93
PVT1-218ENST00000523328 NUDT16Q96DE0 195 aaKnown RBP33.37■■■□□ 2.93
PVT1-218ENST00000523328 SPATA31A1Q5TZJ5 1347 aa33.35■■■□□ 2.93
PVT1-218ENST00000523328 TOPAZ1Q8N9V7 1692 aa33.33■■■□□ 2.93
PVT1-218ENST00000523328 CHRNA2Q15822 529 aa33.32■■■□□ 2.92
PVT1-218ENST00000523328 POLR3AO14802 1390 aaPredicted RBP33.3■■■□□ 2.92
PVT1-218ENST00000523328 CDK19Q9BWU1 502 aa33.28■■■□□ 2.92
PVT1-218ENST00000523328 STRN4Q9NRL3 753 aa33.28■■■□□ 2.92
PVT1-218ENST00000523328 ZC3H6P61129 1189 aaKnown RBP33.27■■■□□ 2.92
PVT1-218ENST00000523328 R3HDM1Q15032 1099 aaKnown RBP33.26■■■□□ 2.91
PVT1-218ENST00000523328 EZH2Q15910 746 aaKnown RBP33.26■■■□□ 2.91
PVT1-218ENST00000523328 NUTM2GQ5VZR2 741 aa33.26■■■□□ 2.91
PVT1-218ENST00000523328 NRKQ7Z2Y5 1582 aa33.25■■■□□ 2.91
PVT1-218ENST00000523328 ACEP12821 1306 aa33.25■■■□□ 2.91
PVT1-218ENST00000523328 FAM196AQ6ZSG2 479 aa33.24■■■□□ 2.91
PVT1-218ENST00000523328 KIAA1210Q9ULL0 1709 aa33.23■■■□□ 2.91
PVT1-218ENST00000523328 TRIM37O94972 964 aa33.23■■■□□ 2.91
PVT1-218ENST00000523328 NBPF8Q3BBV2 869 aa33.23■■■□□ 2.91
PVT1-218ENST00000523328 CAMKK2Q96RR4 588 aa33.23■■■□□ 2.91
PVT1-218ENST00000523328 SSH2Q76I76 1423 aa33.22■■■□□ 2.91
PVT1-218ENST00000523328 CCDC61Q9Y6R9 512 aa33.22■■■□□ 2.91
PVT1-218ENST00000523328 PLEKHG3A1L390 1219 aa33.21■■■□□ 2.91
PVT1-218ENST00000523328 LMO7Q8WWI1 1683 aa33.2■■■□□ 2.91
PVT1-218ENST00000523328 CAMTA1Q9Y6Y1 1673 aa33.2■■■□□ 2.91
PVT1-218ENST00000523328 BARGINQ6ZT62 677 aa33.19■■■□□ 2.9
PVT1-218ENST00000523328 USP35Q9P2H5 1018 aa33.19■■■□□ 2.9
PVT1-218ENST00000523328 RREB1Q92766 1687 aa33.17■■■□□ 2.9
PVT1-218ENST00000523328 USP19O94966 1318 aa33.16■■■□□ 2.9
PVT1-218ENST00000523328 CPDO75976 1380 aa33.16■■■□□ 2.9
PVT1-218ENST00000523328 PARD3Q8TEW0 1356 aa33.16■■■□□ 2.9
PVT1-218ENST00000523328 EVA1CP58658 441 aa33.15■■■□□ 2.9
PVT1-218ENST00000523328 ABTB2Q8N961 1025 aa33.15■■■□□ 2.9
PVT1-218ENST00000523328 APBA3O96018 575 aa33.14■■■□□ 2.9
PVT1-218ENST00000523328 LARP1Q6PKG0 1096 aaKnown RBP33.14■■■□□ 2.9
PVT1-218ENST00000523328 NUP188Q5SRE5 1749 aa33.11■■■□□ 2.89
PVT1-218ENST00000523328 PDE3BQ13370 1112 aa33.11■■■□□ 2.89
PVT1-218ENST00000523328 NBPF1Q3BBV0 1214 aa33.11■■■□□ 2.89
PVT1-218ENST00000523328 TCP11L2Q8N4U5 519 aa33.1■■■□□ 2.89
PVT1-218ENST00000523328 PPIP5K1Q6PFW1 1433 aa33.08■■■□□ 2.89
PVT1-218ENST00000523328 PARP4Q9UKK3 1724 aaKnown RBP33.08■■■□□ 2.89
PVT1-218ENST00000523328 GCP02774 474 aa33.06■■■□□ 2.88
PVT1-218ENST00000523328 NLRP13Q86W25 1043 aa33.06■■■□□ 2.88
PVT1-218ENST00000523328 COL5A2P05997 1499 aaPredicted RBP33.05■■■□□ 2.88
PVT1-218ENST00000523328 THRAP3Q9Y2W1 955 aaKnown RBP33.05■■■□□ 2.88
PVT1-218ENST00000523328 SRPK2P78362 688 aaKnown RBP33.03■■■□□ 2.88
PVT1-218ENST00000523328 CENPJQ9HC77 1338 aaPredicted RBP33.02■■■□□ 2.88
PVT1-218ENST00000523328 CABP2Q9NPB3 220 aa33.01■■■□□ 2.87
PVT1-218ENST00000523328 QRICH2Q9H0J4 1663 aa33.01■■■□□ 2.87
PVT1-218ENST00000523328 BRD4O60885 1362 aaPredicted RBP33■■■□□ 2.87
PVT1-218ENST00000523328 CRB1P82279 1406 aa32.98■■■□□ 2.87
PVT1-218ENST00000523328 PEAK1Q9H792 1746 aa32.98■■■□□ 2.87
PVT1-218ENST00000523328 SLIT3O75094 1523 aa32.97■■■□□ 2.87
PVT1-218ENST00000523328 USP6P35125 1406 aa32.96■■■□□ 2.87
PVT1-218ENST00000523328 NBPF14Q5TI25 921 aa32.95■■■□□ 2.87
PVT1-218ENST00000523328 SBF2Q86WG5 1849 aa32.95■■■□□ 2.86
PVT1-218ENST00000523328 LRRC37A3O60309 1634 aa32.94■■■□□ 2.86
PVT1-218ENST00000523328 CABP1Q9NZU7 370 aa32.93■■■□□ 2.86
PVT1-218ENST00000523328 AATKQ6ZMQ8 1374 aa32.93■■■□□ 2.86
PVT1-218ENST00000523328 COL18A1P39060 1754 aa32.93■■■□□ 2.86
PVT1-218ENST00000523328 PIK3C2AO00443 1686 aa32.91■■■□□ 2.86
PVT1-218ENST00000523328 RGPD3A6NKT7 1758 aaPredicted RBP32.91■■■□□ 2.86
PVT1-218ENST00000523328 RGPD4Q7Z3J3 1758 aa32.91■■■□□ 2.86
PVT1-218ENST00000523328 C11orf95C9JLR9 678 aaPredicted RBP32.91■■■□□ 2.86
PVT1-218ENST00000523328 NLRP6P59044 892 aa32.91■■■□□ 2.86
PVT1-218ENST00000523328 OVOS2A0A0G2JMS6 1433 aa32.91■■■□□ 2.86
PVT1-218ENST00000523328 OVOS2A0A0J9YW53 1432 aa32.91■■■□□ 2.86
PVT1-218ENST00000523328 OVOS2Q6IE36 1432 aa32.91■■■□□ 2.86
PVT1-218ENST00000523328 WNK3Q9BYP7 1800 aa32.88■■■□□ 2.85
PVT1-218ENST00000523328 ZBTB7CA1YPR0 619 aa32.88■■■□□ 2.85
PVT1-218ENST00000523328 DDB1Q16531 1140 aa32.83■■■□□ 2.85
PVT1-218ENST00000523328 SPON1Q9HCB6 807 aa32.83■■■□□ 2.85
PVT1-218ENST00000523328 AXIN2Q9Y2T1 843 aa32.83■■■□□ 2.85
PVT1-218ENST00000523328 PLSCR1O15162 318 aa32.82■■■□□ 2.84
PVT1-218ENST00000523328 TOM1L2Q6ZVM7 507 aa32.82■■■□□ 2.84
PVT1-218ENST00000523328 RGPD5Q99666 1765 aa32.82■■■□□ 2.84
PVT1-218ENST00000523328 KCNQ2O43526 872 aa32.81■■■□□ 2.84
PVT1-218ENST00000523328 TRPM1Q7Z4N2 1603 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms