RNA–Protein interactions for RNA: ENST00000523313.1

CASC9-204, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-204ENST00000523313 APLP2Q06481 763 aa12.79□□□□□ -0.36
CASC9-204ENST00000523313 FHDC1Q9C0D6 1143 aaPredicted RBP12.79□□□□□ -0.36
CASC9-204ENST00000523313 SPATA31A1Q5TZJ5 1347 aa12.79□□□□□ -0.36
CASC9-204ENST00000523313 RRBP1Q9P2E9 1410 aaKnown RBP12.79□□□□□ -0.36
CASC9-204ENST00000523313 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
CASC9-204ENST00000523313 SYT17Q9BSW7 474 aa12.78□□□□□ -0.36
CASC9-204ENST00000523313 CASZ1Q86V15 1759 aa12.78□□□□□ -0.36
CASC9-204ENST00000523313 TECPR2O15040 1411 aa12.78□□□□□ -0.36
CASC9-204ENST00000523313 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
CASC9-204ENST00000523313 ROCK1Q13464 1354 aa12.77□□□□□ -0.37
CASC9-204ENST00000523313 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
CASC9-204ENST00000523313 KIF1BO60333 1816 aa12.76□□□□□ -0.37
CASC9-204ENST00000523313 PDE3BQ13370 1112 aa12.76□□□□□ -0.37
CASC9-204ENST00000523313 CHD4Q14839 1912 aa12.75□□□□□ -0.37
CASC9-204ENST00000523313 TMEM132EQ6IEE7 984 aa12.75□□□□□ -0.37
CASC9-204ENST00000523313 PMFBP1Q8TBY8 1022 aa12.75□□□□□ -0.37
CASC9-204ENST00000523313 PRDM11Q9NQV5 511 aa12.75□□□□□ -0.37
CASC9-204ENST00000523313 STRN4Q9NRL3 753 aa12.75□□□□□ -0.37
CASC9-204ENST00000523313 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
CASC9-204ENST00000523313 RPGRIP1LQ68CZ1 1315 aa12.74□□□□□ -0.37
CASC9-204ENST00000523313 ABCC11Q96J66 1382 aa12.73□□□□□ -0.37
CASC9-204ENST00000523313 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
CASC9-204ENST00000523313 CHRNA2Q15822 529 aa12.73□□□□□ -0.37
CASC9-204ENST00000523313 IFT172Q9UG01 1749 aa12.72□□□□□ -0.37
CASC9-204ENST00000523313 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
CASC9-204ENST00000523313 PPLO60437 1756 aa12.71□□□□□ -0.37
CASC9-204ENST00000523313 TRPM3Q9HCF6 1732 aaPredicted RBP12.71□□□□□ -0.37
CASC9-204ENST00000523313 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
CASC9-204ENST00000523313 KIAA0232Q92628 1395 aa12.7□□□□□ -0.38
CASC9-204ENST00000523313 BARGINQ6ZT62 677 aa12.7□□□□□ -0.38
CASC9-204ENST00000523313 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
CASC9-204ENST00000523313 KNDC1Q76NI1 1749 aa12.7□□□□□ -0.38
CASC9-204ENST00000523313 CRYBG1Q9Y4K1 1723 aa12.69□□□□□ -0.38
CASC9-204ENST00000523313 ITGAEP38570 1179 aa12.69□□□□□ -0.38
CASC9-204ENST00000523313 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
CASC9-204ENST00000523313 BCL11BQ9C0K0 894 aaPredicted RBP12.69□□□□□ -0.38
CASC9-204ENST00000523313 SHANK3Q9BYB0 1731 aa12.68□□□□□ -0.38
CASC9-204ENST00000523313 PTF1AQ7RTS3 328 aa12.68□□□□□ -0.38
CASC9-204ENST00000523313 PROM2Q8N271 834 aa12.68□□□□□ -0.38
CASC9-204ENST00000523313 YTHDC2Q9H6S0 1430 aaKnown RBP12.68□□□□□ -0.38
CASC9-204ENST00000523313 PLSCR1O15162 318 aa12.67□□□□□ -0.38
CASC9-204ENST00000523313 SAFB2Q14151 953 aaKnown RBP eCLIP12.67□□□□□ -0.38
CASC9-204ENST00000523313 GPR162Q16538 588 aa12.67□□□□□ -0.38
CASC9-204ENST00000523313 SSH2Q76I76 1423 aa12.67□□□□□ -0.38
CASC9-204ENST00000523313 ACIN1Q9UKV3 1341 aaKnown RBP12.66□□□□□ -0.38
CASC9-204ENST00000523313 LARP1Q6PKG0 1096 aaKnown RBP12.66□□□□□ -0.38
CASC9-204ENST00000523313 GPRASP1Q5JY77 1395 aa12.66□□□□□ -0.38
CASC9-204ENST00000523313 PAK3O75914 559 aaPredicted RBP12.65□□□□□ -0.38
CASC9-204ENST00000523313 EVA1CP58658 441 aa12.65□□□□□ -0.38
CASC9-204ENST00000523313 ZC3H6P61129 1189 aaKnown RBP12.65□□□□□ -0.38
CASC9-204ENST00000523313 TCP11L2Q8N4U5 519 aa12.65□□□□□ -0.38
CASC9-204ENST00000523313 ARXQ96QS3 562 aa12.65□□□□□ -0.38
CASC9-204ENST00000523313 MTFR1LQ9H019 292 aa12.65□□□□□ -0.38
CASC9-204ENST00000523313 RGPD3A6NKT7 1758 aaPredicted RBP12.65□□□□□ -0.38
CASC9-204ENST00000523313 RGPD4Q7Z3J3 1758 aa12.65□□□□□ -0.38
CASC9-204ENST00000523313 ANKARQ7Z5J8 1434 aa12.64□□□□□ -0.39
CASC9-204ENST00000523313 SIRT1Q96EB6 747 aa12.63□□□□□ -0.39
CASC9-204ENST00000523313 STK32BQ9NY57 414 aa12.63□□□□□ -0.39
CASC9-204ENST00000523313 MAP3K5Q99683 1374 aa12.63□□□□□ -0.39
CASC9-204ENST00000523313 OVOS2A0A0G2JMS6 1433 aa12.62□□□□□ -0.39
CASC9-204ENST00000523313 OVOS2A0A0J9YW53 1432 aa12.62□□□□□ -0.39
CASC9-204ENST00000523313 OVOS2Q6IE36 1432 aa12.62□□□□□ -0.39
CASC9-204ENST00000523313 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
CASC9-204ENST00000523313 HSPA6P17066 643 aa12.62□□□□□ -0.39
CASC9-204ENST00000523313 SLC15A2Q16348 729 aa12.62□□□□□ -0.39
CASC9-204ENST00000523313 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
CASC9-204ENST00000523313 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
CASC9-204ENST00000523313 PRAM1Q96QH2 718 aa12.62□□□□□ -0.39
CASC9-204ENST00000523313 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
CASC9-204ENST00000523313 PIK3C2GO75747 1445 aa12.61□□□□□ -0.39
CASC9-204ENST00000523313 PARP4Q9UKK3 1724 aaKnown RBP12.6□□□□□ -0.39
CASC9-204ENST00000523313 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
CASC9-204ENST00000523313 TXNRD1Q16881 649 aa12.6□□□□□ -0.39
CASC9-204ENST00000523313 NUTM2GQ5VZR2 741 aa12.6□□□□□ -0.39
CASC9-204ENST00000523313 C11orf95C9JLR9 678 aaPredicted RBP12.59□□□□□ -0.39
CASC9-204ENST00000523313 CAPN15O75808 1086 aa12.59□□□□□ -0.39
CASC9-204ENST00000523313 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
CASC9-204ENST00000523313 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
CASC9-204ENST00000523313 THRAP3Q9Y2W1 955 aaKnown RBP12.59□□□□□ -0.39
CASC9-204ENST00000523313 SBF2Q86WG5 1849 aa12.58□□□□□ -0.4
CASC9-204ENST00000523313 NGDNQ8NEJ9 315 aaKnown RBP12.58□□□□□ -0.4
CASC9-204ENST00000523313 ATP10DQ9P241 1426 aa12.58□□□□□ -0.4
CASC9-204ENST00000523313 ATP7BP35670 1465 aa12.58□□□□□ -0.4
CASC9-204ENST00000523313 GOLGB1Q14789 3259 aaKnown RBP12.57□□□□□ -0.4
CASC9-204ENST00000523313 DHX57Q6P158 1386 aaKnown RBP12.57□□□□□ -0.4
CASC9-204ENST00000523313 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
CASC9-204ENST00000523313 POGKQ9P215 609 aa12.56□□□□□ -0.4
CASC9-204ENST00000523313 LRRC37A3O60309 1634 aa12.55□□□□□ -0.4
CASC9-204ENST00000523313 SPATA31E1Q6ZUB1 1445 aa12.55□□□□□ -0.4
CASC9-204ENST00000523313 LMO7Q8WWI1 1683 aa12.55□□□□□ -0.4
CASC9-204ENST00000523313 DDB1Q16531 1140 aa12.55□□□□□ -0.4
CASC9-204ENST00000523313 CFAP70Q5T0N1 1121 aa12.55□□□□□ -0.4
CASC9-204ENST00000523313 NLGN2Q8NFZ4 835 aa12.55□□□□□ -0.4
CASC9-204ENST00000523313 C14orf93Q9H972 538 aaKnown RBP12.55□□□□□ -0.4
CASC9-204ENST00000523313 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
CASC9-204ENST00000523313 YBX3P16989 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
CASC9-204ENST00000523313 MARCH10Q8NA82 808 aaPredicted RBP12.54□□□□□ -0.4
CASC9-204ENST00000523313 GPBP1L1Q9HC44 474 aaPredicted RBP12.54□□□□□ -0.4
CASC9-204ENST00000523313 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
CASC9-204ENST00000523313 ZNF526Q8TF50 670 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms