RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 SBNO1A3KN83 1393 aa16.54■□□□□ 0.24
PVT1-215ENST00000522963 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
PVT1-215ENST00000522963 ILDR2Q71H61 639 aa16.54■□□□□ 0.24
PVT1-215ENST00000522963 CABLES1Q8TDN4 633 aa16.54■□□□□ 0.24
PVT1-215ENST00000522963 NUTM2GQ5VZR2 741 aa16.53■□□□□ 0.24
PVT1-215ENST00000522963 TMC1Q8TDI8 760 aa16.53■□□□□ 0.24
PVT1-215ENST00000522963 RGS17Q9UGC6 210 aaPredicted RBP16.53■□□□□ 0.24
PVT1-215ENST00000522963 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
PVT1-215ENST00000522963 ARHGEF10O15013 1369 aa16.52■□□□□ 0.24
PVT1-215ENST00000522963 COL22A1Q8NFW1 1626 aaPredicted RBP16.52■□□□□ 0.24
PVT1-215ENST00000522963 NGLY1Q96IV0 654 aa16.52■□□□□ 0.24
PVT1-215ENST00000522963 POLR3AO14802 1390 aaPredicted RBP16.51■□□□□ 0.23
PVT1-215ENST00000522963 AFF2P51816 1311 aa16.5■□□□□ 0.23
PVT1-215ENST00000522963 SLC12A5Q9H2X9 1139 aa16.5■□□□□ 0.23
PVT1-215ENST00000522963 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
PVT1-215ENST00000522963 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
PVT1-215ENST00000522963 ALS2Q96Q42 1657 aa16.48■□□□□ 0.23
PVT1-215ENST00000522963 ZNF772Q68DY9 489 aaPredicted RBP16.47■□□□□ 0.23
PVT1-215ENST00000522963 NINLQ9Y2I6 1382 aa16.47■□□□□ 0.23
PVT1-215ENST00000522963 MARF1Q9Y4F3 1742 aaKnown RBP16.46■□□□□ 0.23
PVT1-215ENST00000522963 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.23
PVT1-215ENST00000522963 ABCA3Q99758 1704 aa16.45■□□□□ 0.22
PVT1-215ENST00000522963 USP6P35125 1406 aa16.45■□□□□ 0.22
PVT1-215ENST00000522963 AKAP12Q02952 1782 aa16.44■□□□□ 0.22
PVT1-215ENST00000522963 MYOM1P52179 1685 aa16.44■□□□□ 0.22
PVT1-215ENST00000522963 CD163L1Q9NR16 1453 aa16.44■□□□□ 0.22
PVT1-215ENST00000522963 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
PVT1-215ENST00000522963 HDGFL2Q7Z4V5 671 aaPredicted RBP16.44■□□□□ 0.22
PVT1-215ENST00000522963 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
PVT1-215ENST00000522963 PANK3Q9H999 370 aa16.44■□□□□ 0.22
PVT1-215ENST00000522963 USP21Q9UK80 565 aa16.44■□□□□ 0.22
PVT1-215ENST00000522963 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
PVT1-215ENST00000522963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
PVT1-215ENST00000522963 CPSF1Q10570 1443 aaKnown RBP16.43■□□□□ 0.22
PVT1-215ENST00000522963 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
PVT1-215ENST00000522963 SOCS7O14512 581 aa16.42■□□□□ 0.22
PVT1-215ENST00000522963 NLRP6P59044 892 aa16.42■□□□□ 0.22
PVT1-215ENST00000522963 QTRT2Q9H974 415 aaKnown RBP16.42■□□□□ 0.22
PVT1-215ENST00000522963 TERF2IPQ9NYB0 399 aa16.42■□□□□ 0.22
PVT1-215ENST00000522963 ZBTB7CA1YPR0 619 aa16.41■□□□□ 0.22
PVT1-215ENST00000522963 ZC3H6P61129 1189 aaKnown RBP16.41■□□□□ 0.22
PVT1-215ENST00000522963 NLRP13Q86W25 1043 aa16.41■□□□□ 0.22
PVT1-215ENST00000522963 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
PVT1-215ENST00000522963 TTC21BQ7Z4L5 1316 aa16.41■□□□□ 0.22
PVT1-215ENST00000522963 BRD4O60885 1362 aaPredicted RBP16.39■□□□□ 0.21
PVT1-215ENST00000522963 FAM83GA6ND36 823 aa16.39■□□□□ 0.21
PVT1-215ENST00000522963 SOX12O15370 315 aa16.39■□□□□ 0.21
PVT1-215ENST00000522963 RXRBP28702 533 aa16.39■□□□□ 0.21
PVT1-215ENST00000522963 FNBP4Q8N3X1 1017 aaPredicted RBP16.39■□□□□ 0.21
PVT1-215ENST00000522963 PRDM11Q9NQV5 511 aa16.39■□□□□ 0.21
PVT1-215ENST00000522963 PHRF1Q9P1Y6 1649 aaKnown RBP16.38■□□□□ 0.21
PVT1-215ENST00000522963 CHRNA2Q15822 529 aa16.38■□□□□ 0.21
PVT1-215ENST00000522963 TRPC5Q9UL62 973 aaPredicted RBP16.38■□□□□ 0.21
PVT1-215ENST00000522963 MON2Q7Z3U7 1717 aa16.38■□□□□ 0.21
PVT1-215ENST00000522963 CRYBG1Q9Y4K1 1723 aa16.38■□□□□ 0.21
PVT1-215ENST00000522963 PER1O15534 1290 aaPredicted RBP16.37■□□□□ 0.21
PVT1-215ENST00000522963 CCDC9Q9Y3X0 531 aaKnown RBP16.37■□□□□ 0.21
PVT1-215ENST00000522963 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
PVT1-215ENST00000522963 PIK3C2AO00443 1686 aa16.37■□□□□ 0.21
PVT1-215ENST00000522963 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
PVT1-215ENST00000522963 NSD3Q9BZ95 1437 aa16.36■□□□□ 0.21
PVT1-215ENST00000522963 NME9Q86XW9 330 aa16.36■□□□□ 0.21
PVT1-215ENST00000522963 UNC5CLQ8IV45 518 aa16.36■□□□□ 0.21
PVT1-215ENST00000522963 ZRANB1Q9UGI0 708 aa16.36■□□□□ 0.21
PVT1-215ENST00000522963 PLCH1Q4KWH8 1693 aa16.36■□□□□ 0.21
PVT1-215ENST00000522963 KIAA0232Q92628 1395 aa16.36■□□□□ 0.21
PVT1-215ENST00000522963 GCP02774 474 aa16.35■□□□□ 0.21
PVT1-215ENST00000522963 BTG4Q9NY30 223 aa16.35■□□□□ 0.21
PVT1-215ENST00000522963 EDC4Q6P2E9 1401 aaKnown RBP16.35■□□□□ 0.21
PVT1-215ENST00000522963 BCL9LQ86UU0 1499 aa16.35■□□□□ 0.21
PVT1-215ENST00000522963 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
PVT1-215ENST00000522963 RBM6P78332 1123 aaKnown RBP16.34■□□□□ 0.21
PVT1-215ENST00000522963 KNSTRNQ9Y448 316 aa16.34■□□□□ 0.21
PVT1-215ENST00000522963 USP19O94966 1318 aa16.34■□□□□ 0.21
PVT1-215ENST00000522963 SLIT2O94813 1529 aa16.34■□□□□ 0.21
PVT1-215ENST00000522963 COL14A1Q05707 1796 aaKnown RBP16.33■□□□□ 0.21
PVT1-215ENST00000522963 ATRNO75882 1429 aa16.32■□□□□ 0.2
PVT1-215ENST00000522963 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
PVT1-215ENST00000522963 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
PVT1-215ENST00000522963 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
PVT1-215ENST00000522963 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.31■□□□□ 0.2
PVT1-215ENST00000522963 CGNL1Q0VF96 1302 aa16.3■□□□□ 0.2
PVT1-215ENST00000522963 EVA1CP58658 441 aa16.3■□□□□ 0.2
PVT1-215ENST00000522963 GJD4Q96KN9 370 aaPredicted RBP16.3■□□□□ 0.2
PVT1-215ENST00000522963 FYB1O15117 783 aa16.29■□□□□ 0.2
PVT1-215ENST00000522963 KCNH5Q8NCM2 988 aa16.29■□□□□ 0.2
PVT1-215ENST00000522963 SLIT3O75094 1523 aa16.29■□□□□ 0.2
PVT1-215ENST00000522963 A0A0G2JS52 829 aa16.28■□□□□ 0.2
PVT1-215ENST00000522963 MYT1Q01538 1121 aa16.28■□□□□ 0.2
PVT1-215ENST00000522963 VPS72Q15906 364 aa16.28■□□□□ 0.2
PVT1-215ENST00000522963 GGNBP2Q9H3C7 697 aa16.28■□□□□ 0.2
PVT1-215ENST00000522963 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
PVT1-215ENST00000522963 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
PVT1-215ENST00000522963 COG3Q96JB2 828 aa16.27■□□□□ 0.2
PVT1-215ENST00000522963 NRAPQ86VF7 1730 aa16.27■□□□□ 0.19
PVT1-215ENST00000522963 CPDO75976 1380 aa16.26■□□□□ 0.19
PVT1-215ENST00000522963 USP31Q70CQ4 1352 aa16.26■□□□□ 0.19
PVT1-215ENST00000522963 NPC1L1Q9UHC9 1359 aa16.26■□□□□ 0.19
PVT1-215ENST00000522963 DIEXFQ68CQ4 756 aaKnown RBP16.26■□□□□ 0.19
PVT1-215ENST00000522963 USP35Q9P2H5 1018 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms