RNA–Protein interactions for RNA: ENST00000522749.5

CLK4-212, Transcript of CDC like kinase 4, humanhuman

TSL 3

Gene CLK4, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-212ENST00000522749 PLEKHG3A1L390 1219 aa9.04□□□□□ -0.96
CLK4-212ENST00000522749 KRT28Q7Z3Y7 464 aa9.04□□□□□ -0.96
CLK4-212ENST00000522749 USP6P35125 1406 aa9.04□□□□□ -0.96
CLK4-212ENST00000522749 COL18A1P39060 1754 aa9.04□□□□□ -0.96
CLK4-212ENST00000522749 SPATA31A3Q5VYP0 1347 aa9.04□□□□□ -0.96
CLK4-212ENST00000522749 PSME1Q06323 249 aa9.03□□□□□ -0.96
CLK4-212ENST00000522749 NGDNQ8NEJ9 315 aaKnown RBP9.03□□□□□ -0.96
CLK4-212ENST00000522749 RGPD2P0DJD1 1756 aa9.03□□□□□ -0.96
CLK4-212ENST00000522749 CPSF1Q10570 1443 aaKnown RBP9.03□□□□□ -0.96
CLK4-212ENST00000522749 ARHGEF10O15013 1369 aa9.02□□□□□ -0.97
CLK4-212ENST00000522749 LMO7Q8WWI1 1683 aa9.02□□□□□ -0.97
CLK4-212ENST00000522749 SSH2Q76I76 1423 aa9.02□□□□□ -0.97
CLK4-212ENST00000522749 HSPA5P11021 654 aaKnown RBP9.01□□□□□ -0.97
CLK4-212ENST00000522749 EIF4G2P78344 907 aaKnown RBP eCLIP9.01□□□□□ -0.97
CLK4-212ENST00000522749 CABP1Q9NZU7 370 aa9.01□□□□□ -0.97
CLK4-212ENST00000522749 SLIT3O75094 1523 aa9□□□□□ -0.97
CLK4-212ENST00000522749 NINLQ9Y2I6 1382 aa9□□□□□ -0.97
CLK4-212ENST00000522749 NUTM2BA6NNL0 878 aaPredicted RBP9□□□□□ -0.97
CLK4-212ENST00000522749 NUTM2EB1AL46 878 aaPredicted RBP9□□□□□ -0.97
CLK4-212ENST00000522749 TMF1P82094 1093 aa9□□□□□ -0.97
CLK4-212ENST00000522749 NUTM2AQ8IVF1 878 aaPredicted RBP9□□□□□ -0.97
CLK4-212ENST00000522749 PUS7Q96PZ0 661 aaKnown RBP9□□□□□ -0.97
CLK4-212ENST00000522749 A0A1W2PP64 1363 aa8.99□□□□□ -0.97
CLK4-212ENST00000522749 BRD4O60885 1362 aaPredicted RBP8.99□□□□□ -0.97
CLK4-212ENST00000522749 SLC24A1O60721 1099 aa8.99□□□□□ -0.97
CLK4-212ENST00000522749 KTN1Q86UP2 1357 aaKnown RBP8.99□□□□□ -0.97
CLK4-212ENST00000522749 EDC4Q6P2E9 1401 aaKnown RBP8.98□□□□□ -0.97
CLK4-212ENST00000522749 FAM208AQ9UK61 1670 aaKnown RBP8.98□□□□□ -0.97
CLK4-212ENST00000522749 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
CLK4-212ENST00000522749 LMOD2Q6P5Q4 547 aa8.98□□□□□ -0.97
CLK4-212ENST00000522749 NFAT5O94916 1531 aa8.98□□□□□ -0.97
CLK4-212ENST00000522749 VIRMAQ69YN4 1812 aaKnown RBP8.97□□□□□ -0.97
CLK4-212ENST00000522749 MEX3CQ5U5Q3 659 aaKnown RBP8.97□□□□□ -0.97
CLK4-212ENST00000522749 TMC1Q8TDI8 760 aa8.97□□□□□ -0.97
CLK4-212ENST00000522749 CABLES1Q8TDN4 633 aa8.97□□□□□ -0.97
CLK4-212ENST00000522749 SLC12A5Q9H2X9 1139 aa8.97□□□□□ -0.97
CLK4-212ENST00000522749 ANKRD36BQ8N2N9 1353 aa8.97□□□□□ -0.97
CLK4-212ENST00000522749 ADAMTS2O95450 1211 aa8.96□□□□□ -0.98
CLK4-212ENST00000522749 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
CLK4-212ENST00000522749 NUTM2GQ5VZR2 741 aa8.96□□□□□ -0.98
CLK4-212ENST00000522749 ZNF692Q9BU19 519 aaPredicted RBP8.96□□□□□ -0.98
CLK4-212ENST00000522749 RGS17Q9UGC6 210 aaPredicted RBP8.96□□□□□ -0.98
CLK4-212ENST00000522749 USP19O94966 1318 aa8.96□□□□□ -0.98
CLK4-212ENST00000522749 TTC21BQ7Z4L5 1316 aa8.96□□□□□ -0.98
CLK4-212ENST00000522749 PEAK1Q9H792 1746 aa8.96□□□□□ -0.98
CLK4-212ENST00000522749 SLIT2O94813 1529 aa8.95□□□□□ -0.98
CLK4-212ENST00000522749 GLI3P10071 1580 aa8.95□□□□□ -0.98
CLK4-212ENST00000522749 PLEKHG5O94827 1062 aa8.95□□□□□ -0.98
CLK4-212ENST00000522749 HDGFL2Q7Z4V5 671 aaPredicted RBP8.95□□□□□ -0.98
CLK4-212ENST00000522749 ABTB2Q8N961 1025 aa8.95□□□□□ -0.98
CLK4-212ENST00000522749 TERF2IPQ9NYB0 399 aa8.95□□□□□ -0.98
CLK4-212ENST00000522749 AFF2P51816 1311 aa8.95□□□□□ -0.98
CLK4-212ENST00000522749 TTC21AQ8NDW8 1320 aa8.95□□□□□ -0.98
CLK4-212ENST00000522749 OVOS2A0A0J9YW53 1432 aa8.95□□□□□ -0.98
CLK4-212ENST00000522749 OVOS2Q6IE36 1432 aa8.95□□□□□ -0.98
CLK4-212ENST00000522749 ABCC6O95255 1503 aa8.95□□□□□ -0.98
CLK4-212ENST00000522749 KAT6BQ8WYB5 2073 aa8.94□□□□□ -0.98
CLK4-212ENST00000522749 C11orf95C9JLR9 678 aaPredicted RBP8.94□□□□□ -0.98
CLK4-212ENST00000522749 C8orf37Q96NL8 207 aa8.94□□□□□ -0.98
CLK4-212ENST00000522749 BCL9LQ86UU0 1499 aa8.94□□□□□ -0.98
CLK4-212ENST00000522749 SBF2Q86WG5 1849 aa8.94□□□□□ -0.98
CLK4-212ENST00000522749 HAP1P54257 671 aaPredicted RBP8.93□□□□□ -0.98
CLK4-212ENST00000522749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.93□□□□□ -0.98
CLK4-212ENST00000522749 CAMTA1Q9Y6Y1 1673 aa8.93□□□□□ -0.98
CLK4-212ENST00000522749 PARP4Q9UKK3 1724 aaKnown RBP8.93□□□□□ -0.98
CLK4-212ENST00000522749 THSD7AQ9UPZ6 1657 aa8.92□□□□□ -0.98
CLK4-212ENST00000522749 ATRNO75882 1429 aa8.92□□□□□ -0.98
CLK4-212ENST00000522749 NSD3Q9BZ95 1437 aa8.92□□□□□ -0.98
CLK4-212ENST00000522749 USP31Q70CQ4 1352 aa8.92□□□□□ -0.98
CLK4-212ENST00000522749 KIAA0232Q92628 1395 aa8.92□□□□□ -0.98
CLK4-212ENST00000522749 KIF7Q2M1P5 1343 aa8.92□□□□□ -0.98
CLK4-212ENST00000522749 NLRP13Q86W25 1043 aa8.92□□□□□ -0.98
CLK4-212ENST00000522749 NME9Q86XW9 330 aa8.92□□□□□ -0.98
CLK4-212ENST00000522749 NGLY1Q96IV0 654 aa8.92□□□□□ -0.98
CLK4-212ENST00000522749 EP400Q96L91 3159 aa8.92□□□□□ -0.98
CLK4-212ENST00000522749 CPDO75976 1380 aa8.91□□□□□ -0.98
CLK4-212ENST00000522749 NLRP6P59044 892 aa8.91□□□□□ -0.98
CLK4-212ENST00000522749 POTEAQ6S8J7 498 aa8.91□□□□□ -0.98
CLK4-212ENST00000522749 FNBP4Q8N3X1 1017 aaPredicted RBP8.91□□□□□ -0.98
CLK4-212ENST00000522749 POLR3GLQ9BT43 218 aa8.91□□□□□ -0.98
CLK4-212ENST00000522749 ZRANB1Q9UGI0 708 aa8.91□□□□□ -0.98
CLK4-212ENST00000522749 SHANK3Q9BYB0 1731 aa8.91□□□□□ -0.98
CLK4-212ENST00000522749 CCDC7Q96M83 1385 aa8.9□□□□□ -0.98
CLK4-212ENST00000522749 ZNF772Q68DY9 489 aaPredicted RBP8.9□□□□□ -0.98
CLK4-212ENST00000522749 CARD14Q9BXL6 1004 aa8.9□□□□□ -0.98
CLK4-212ENST00000522749 USP21Q9UK80 565 aa8.9□□□□□ -0.98
CLK4-212ENST00000522749 LRRC37A3O60309 1634 aa8.9□□□□□ -0.99
CLK4-212ENST00000522749 COL5A2P05997 1499 aaPredicted RBP8.89□□□□□ -0.99
CLK4-212ENST00000522749 CDK12Q9NYV4 1490 aaPredicted RBP8.89□□□□□ -0.99
CLK4-212ENST00000522749 WASHC2AQ641Q2 1341 aa8.89□□□□□ -0.99
CLK4-212ENST00000522749 FAM83GA6ND36 823 aa8.89□□□□□ -0.99
CLK4-212ENST00000522749 GCP02774 474 aa8.89□□□□□ -0.99
CLK4-212ENST00000522749 ZC3H6P61129 1189 aaKnown RBP8.89□□□□□ -0.99
CLK4-212ENST00000522749 ILDR2Q71H61 639 aa8.89□□□□□ -0.99
CLK4-212ENST00000522749 CHRNA2Q15822 529 aa8.88□□□□□ -0.99
CLK4-212ENST00000522749 PRDM11Q9NQV5 511 aa8.88□□□□□ -0.99
CLK4-212ENST00000522749 RGS12O14924 1447 aa8.88□□□□□ -0.99
CLK4-212ENST00000522749 FYB1O15117 783 aa8.87□□□□□ -0.99
CLK4-212ENST00000522749 ZEB1P37275 1124 aaPredicted RBP8.87□□□□□ -0.99
CLK4-212ENST00000522749 UNC5CLQ8IV45 518 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms