RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 FAM182BQ5T319 152 aa22.46■■□□□ 1.19
TRAPPC9-213ENST00000522504 EIF3AQ14152 1382 aaKnown RBP22.46■■□□□ 1.19
TRAPPC9-213ENST00000522504 NGDNQ8NEJ9 315 aaKnown RBP22.45■■□□□ 1.18
TRAPPC9-213ENST00000522504 PAK3O75914 559 aaPredicted RBP22.44■■□□□ 1.18
TRAPPC9-213ENST00000522504 COL14A1Q05707 1796 aaKnown RBP22.44■■□□□ 1.18
TRAPPC9-213ENST00000522504 SPATA31A5Q5VU36 1347 aa22.44■■□□□ 1.18
TRAPPC9-213ENST00000522504 SPATA31A7Q8IWB4 1347 aa22.44■■□□□ 1.18
TRAPPC9-213ENST00000522504 CRYBG1Q9Y4K1 1723 aa22.43■■□□□ 1.18
TRAPPC9-213ENST00000522504 ATP7BP35670 1465 aa22.42■■□□□ 1.18
TRAPPC9-213ENST00000522504 NUDT16Q96DE0 195 aaKnown RBP22.42■■□□□ 1.18
TRAPPC9-213ENST00000522504 PSDA5PKW4 1024 aaPredicted RBP22.41■■□□□ 1.18
TRAPPC9-213ENST00000522504 PRDM11Q9NQV5 511 aa22.4■■□□□ 1.18
TRAPPC9-213ENST00000522504 KIAA0232Q92628 1395 aa22.39■■□□□ 1.18
TRAPPC9-213ENST00000522504 BAG6P46379 1132 aa22.39■■□□□ 1.17
TRAPPC9-213ENST00000522504 EN1Q05925 392 aaPredicted RBP22.39■■□□□ 1.17
TRAPPC9-213ENST00000522504 CHRNA2Q15822 529 aa22.39■■□□□ 1.17
TRAPPC9-213ENST00000522504 STAC3Q96MF2 364 aa22.39■■□□□ 1.17
TRAPPC9-213ENST00000522504 ARHGEF28Q8N1W1 1705 aaKnown RBP22.38■■□□□ 1.17
TRAPPC9-213ENST00000522504 THSD7AQ9UPZ6 1657 aa22.37■■□□□ 1.17
TRAPPC9-213ENST00000522504 NUTM2GQ5VZR2 741 aa22.37■■□□□ 1.17
TRAPPC9-213ENST00000522504 CDK19Q9BWU1 502 aa22.37■■□□□ 1.17
TRAPPC9-213ENST00000522504 SPATA31A1Q5TZJ5 1347 aa22.35■■□□□ 1.17
TRAPPC9-213ENST00000522504 HRCP23327 699 aa22.35■■□□□ 1.17
TRAPPC9-213ENST00000522504 ZC3H6P61129 1189 aaKnown RBP22.34■■□□□ 1.17
TRAPPC9-213ENST00000522504 LRP5O75197 1615 aa22.33■■□□□ 1.17
TRAPPC9-213ENST00000522504 STRN4Q9NRL3 753 aa22.33■■□□□ 1.17
TRAPPC9-213ENST00000522504 POLR3AO14802 1390 aaPredicted RBP22.33■■□□□ 1.17
TRAPPC9-213ENST00000522504 ACEP12821 1306 aa22.32■■□□□ 1.16
TRAPPC9-213ENST00000522504 NBPF8Q3BBV2 869 aa22.32■■□□□ 1.16
TRAPPC9-213ENST00000522504 PHRF1Q9P1Y6 1649 aaKnown RBP22.31■■□□□ 1.16
TRAPPC9-213ENST00000522504 NBPF1Q3BBV0 1214 aa22.3■■□□□ 1.16
TRAPPC9-213ENST00000522504 ITSN1Q15811 1721 aa22.3■■□□□ 1.16
TRAPPC9-213ENST00000522504 DISP2A7MBM2 1401 aa22.3■■□□□ 1.16
TRAPPC9-213ENST00000522504 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
TRAPPC9-213ENST00000522504 PLEKHG3A1L390 1219 aa22.29■■□□□ 1.16
TRAPPC9-213ENST00000522504 R3HDM1Q15032 1099 aaKnown RBP22.29■■□□□ 1.16
TRAPPC9-213ENST00000522504 EZH2Q15910 746 aaKnown RBP22.29■■□□□ 1.16
TRAPPC9-213ENST00000522504 CCDC61Q9Y6R9 512 aa22.29■■□□□ 1.16
TRAPPC9-213ENST00000522504 TOPAZ1Q8N9V7 1692 aa22.28■■□□□ 1.16
TRAPPC9-213ENST00000522504 TRIM37O94972 964 aa22.28■■□□□ 1.16
TRAPPC9-213ENST00000522504 USP35Q9P2H5 1018 aa22.28■■□□□ 1.16
TRAPPC9-213ENST00000522504 TNS1Q9HBL0 1735 aaKnown RBP22.28■■□□□ 1.16
TRAPPC9-213ENST00000522504 LARP1Q6PKG0 1096 aaKnown RBP22.26■■□□□ 1.15
TRAPPC9-213ENST00000522504 CAMKK2Q96RR4 588 aa22.26■■□□□ 1.15
TRAPPC9-213ENST00000522504 SSH2Q76I76 1423 aa22.25■■□□□ 1.15
TRAPPC9-213ENST00000522504 ABTB2Q8N961 1025 aa22.25■■□□□ 1.15
TRAPPC9-213ENST00000522504 CAMTA1Q9Y6Y1 1673 aa22.25■■□□□ 1.15
TRAPPC9-213ENST00000522504 NRKQ7Z2Y5 1582 aa22.25■■□□□ 1.15
TRAPPC9-213ENST00000522504 FAM196AQ6ZSG2 479 aa22.24■■□□□ 1.15
TRAPPC9-213ENST00000522504 USP19O94966 1318 aa22.24■■□□□ 1.15
TRAPPC9-213ENST00000522504 EVA1CP58658 441 aa22.23■■□□□ 1.15
TRAPPC9-213ENST00000522504 BARGINQ6ZT62 677 aa22.23■■□□□ 1.15
TRAPPC9-213ENST00000522504 CPDO75976 1380 aa22.22■■□□□ 1.15
TRAPPC9-213ENST00000522504 CABP2Q9NPB3 220 aa22.21■■□□□ 1.15
TRAPPC9-213ENST00000522504 KIAA1210Q9ULL0 1709 aa22.2■■□□□ 1.14
TRAPPC9-213ENST00000522504 APBA3O96018 575 aa22.2■■□□□ 1.14
TRAPPC9-213ENST00000522504 LMO7Q8WWI1 1683 aa22.2■■□□□ 1.14
TRAPPC9-213ENST00000522504 GCP02774 474 aa22.19■■□□□ 1.14
TRAPPC9-213ENST00000522504 SRPK2P78362 688 aaKnown RBP22.19■■□□□ 1.14
TRAPPC9-213ENST00000522504 TCP11L2Q8N4U5 519 aa22.19■■□□□ 1.14
TRAPPC9-213ENST00000522504 PPIP5K1Q6PFW1 1433 aa22.19■■□□□ 1.14
TRAPPC9-213ENST00000522504 PDE3BQ13370 1112 aa22.18■■□□□ 1.14
TRAPPC9-213ENST00000522504 CENPJQ9HC77 1338 aaPredicted RBP22.17■■□□□ 1.14
TRAPPC9-213ENST00000522504 NLRP13Q86W25 1043 aa22.16■■□□□ 1.14
TRAPPC9-213ENST00000522504 CABP1Q9NZU7 370 aa22.14■■□□□ 1.13
TRAPPC9-213ENST00000522504 COL5A2P05997 1499 aaPredicted RBP22.14■■□□□ 1.13
TRAPPC9-213ENST00000522504 PARD3Q8TEW0 1356 aa22.13■■□□□ 1.13
TRAPPC9-213ENST00000522504 THRAP3Q9Y2W1 955 aaKnown RBP22.12■■□□□ 1.13
TRAPPC9-213ENST00000522504 USP6P35125 1406 aa22.11■■□□□ 1.13
TRAPPC9-213ENST00000522504 ZBTB7CA1YPR0 619 aa22.1■■□□□ 1.13
TRAPPC9-213ENST00000522504 RREB1Q92766 1687 aa22.1■■□□□ 1.13
TRAPPC9-213ENST00000522504 NLRP6P59044 892 aa22.09■■□□□ 1.13
TRAPPC9-213ENST00000522504 CRB1P82279 1406 aa22.08■■□□□ 1.13
TRAPPC9-213ENST00000522504 L3MBTL2Q969R5 705 aa22.08■■□□□ 1.13
TRAPPC9-213ENST00000522504 BRD4O60885 1362 aaPredicted RBP22.08■■□□□ 1.12
TRAPPC9-213ENST00000522504 AATKQ6ZMQ8 1374 aa22.08■■□□□ 1.12
TRAPPC9-213ENST00000522504 NUP188Q5SRE5 1749 aa22.08■■□□□ 1.12
TRAPPC9-213ENST00000522504 QRICH2Q9H0J4 1663 aa22.07■■□□□ 1.12
TRAPPC9-213ENST00000522504 SLIT3O75094 1523 aa22.07■■□□□ 1.12
TRAPPC9-213ENST00000522504 AXIN2Q9Y2T1 843 aa22.07■■□□□ 1.12
TRAPPC9-213ENST00000522504 PARP4Q9UKK3 1724 aaKnown RBP22.06■■□□□ 1.12
TRAPPC9-213ENST00000522504 PTF1AQ7RTS3 328 aa22.05■■□□□ 1.12
TRAPPC9-213ENST00000522504 PIK3C2AO00443 1686 aa22.04■■□□□ 1.12
TRAPPC9-213ENST00000522504 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
TRAPPC9-213ENST00000522504 NBPF14Q5TI25 921 aa22.03■■□□□ 1.12
TRAPPC9-213ENST00000522504 SIN3AQ96ST3 1273 aa22.02■■□□□ 1.12
TRAPPC9-213ENST00000522504 COL18A1P39060 1754 aa22.02■■□□□ 1.11
TRAPPC9-213ENST00000522504 OVOS2A0A0G2JMS6 1433 aa22.01■■□□□ 1.11
TRAPPC9-213ENST00000522504 OVOS2A0A0J9YW53 1432 aa22.01■■□□□ 1.11
TRAPPC9-213ENST00000522504 OVOS2Q6IE36 1432 aa22.01■■□□□ 1.11
TRAPPC9-213ENST00000522504 TOM1L2Q6ZVM7 507 aa22.01■■□□□ 1.11
TRAPPC9-213ENST00000522504 LRRC37A3O60309 1634 aa22.01■■□□□ 1.11
TRAPPC9-213ENST00000522504 EVC2Q86UK5 1308 aa22.01■■□□□ 1.11
TRAPPC9-213ENST00000522504 DDB1Q16531 1140 aa22■■□□□ 1.11
TRAPPC9-213ENST00000522504 TTC21BQ7Z4L5 1316 aa22■■□□□ 1.11
TRAPPC9-213ENST00000522504 ARHGEF25Q86VW2 580 aa21.99■■□□□ 1.11
TRAPPC9-213ENST00000522504 MARCH10Q8NA82 808 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC9-213ENST00000522504 WDR17Q8IZU2 1322 aa21.99■■□□□ 1.11
TRAPPC9-213ENST00000522504 CPSF1Q10570 1443 aaKnown RBP21.98■■□□□ 1.11
TRAPPC9-213ENST00000522504 SOX12O15370 315 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms