RNA–Protein interactions for RNA: ENST00000522476.5

NDRG1-222, Transcript of N-myc downstream regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NDRG1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-222ENST00000522476 PHLPP1O60346 1717 aa17.37■□□□□ 0.37
NDRG1-222ENST00000522476 RRP1P56182 461 aaKnown RBP17.37■□□□□ 0.37
NDRG1-222ENST00000522476 TXNDC2Q86VQ3 553 aa17.37■□□□□ 0.37
NDRG1-222ENST00000522476 PNNQ9H307 717 aaKnown RBP17.37■□□□□ 0.37
NDRG1-222ENST00000522476 ANKRD26Q9UPS8 1709 aa17.37■□□□□ 0.37
NDRG1-222ENST00000522476 ADAMTS13Q76LX8 1427 aa17.36■□□□□ 0.37
NDRG1-222ENST00000522476 CD163L1Q9NR16 1453 aa17.36■□□□□ 0.37
NDRG1-222ENST00000522476 RUNDC1Q96C34 613 aa17.36■□□□□ 0.37
NDRG1-222ENST00000522476 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
NDRG1-222ENST00000522476 SALL2Q9Y467 1007 aaPredicted RBP17.36■□□□□ 0.37
NDRG1-222ENST00000522476 E9PSI1 815 aa17.35■□□□□ 0.37
NDRG1-222ENST00000522476 MTHFSP49914 203 aa17.35■□□□□ 0.37
NDRG1-222ENST00000522476 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
NDRG1-222ENST00000522476 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
NDRG1-222ENST00000522476 CABP1Q9NZU7 370 aa17.35■□□□□ 0.37
NDRG1-222ENST00000522476 ADGRB2O60241 1585 aa17.34■□□□□ 0.37
NDRG1-222ENST00000522476 EDC4Q6P2E9 1401 aaKnown RBP17.34■□□□□ 0.37
NDRG1-222ENST00000522476 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
NDRG1-222ENST00000522476 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
NDRG1-222ENST00000522476 SLAIN2Q9P270 581 aa17.34■□□□□ 0.37
NDRG1-222ENST00000522476 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.36
NDRG1-222ENST00000522476 AFF2P51816 1311 aa17.33■□□□□ 0.36
NDRG1-222ENST00000522476 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.36
NDRG1-222ENST00000522476 FYB1O15117 783 aa17.32■□□□□ 0.36
NDRG1-222ENST00000522476 RBM6P78332 1123 aaKnown RBP17.32■□□□□ 0.36
NDRG1-222ENST00000522476 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
NDRG1-222ENST00000522476 CPSF1Q10570 1443 aaKnown RBP17.32■□□□□ 0.36
NDRG1-222ENST00000522476 APAF1O14727 1248 aa17.31■□□□□ 0.36
NDRG1-222ENST00000522476 SLFN5Q08AF3 891 aa17.31■□□□□ 0.36
NDRG1-222ENST00000522476 CCDC27Q2M243 656 aa17.31■□□□□ 0.36
NDRG1-222ENST00000522476 COL16A1Q07092 1604 aaPredicted RBP17.31■□□□□ 0.36
NDRG1-222ENST00000522476 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
NDRG1-222ENST00000522476 PPIP5K1Q6PFW1 1433 aa17.31■□□□□ 0.36
NDRG1-222ENST00000522476 CDCA7LQ96GN5 454 aa17.3■□□□□ 0.36
NDRG1-222ENST00000522476 CDC42BPGQ6DT37 1551 aa17.3■□□□□ 0.36
NDRG1-222ENST00000522476 SHPRHQ149N8 1683 aa17.3■□□□□ 0.36
NDRG1-222ENST00000522476 LTKP29376 864 aa17.29■□□□□ 0.36
NDRG1-222ENST00000522476 TNNT2P45379 298 aaPredicted RBP17.29■□□□□ 0.36
NDRG1-222ENST00000522476 DUSP27Q5VZP5 1158 aa17.29■□□□□ 0.36
NDRG1-222ENST00000522476 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
NDRG1-222ENST00000522476 TRMT2AQ8IZ69 625 aaKnown RBP17.29■□□□□ 0.36
NDRG1-222ENST00000522476 NUDT16Q96DE0 195 aaKnown RBP17.29■□□□□ 0.36
NDRG1-222ENST00000522476 QTRT2Q9H974 415 aaKnown RBP17.29■□□□□ 0.36
NDRG1-222ENST00000522476 KIF20BQ96Q89 1820 aa17.29■□□□□ 0.36
NDRG1-222ENST00000522476 WDR63Q8IWG1 891 aa17.28■□□□□ 0.36
NDRG1-222ENST00000522476 CCDC146Q8IYE0 955 aa17.28■□□□□ 0.36
NDRG1-222ENST00000522476 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
NDRG1-222ENST00000522476 GGNBP2Q9H3C7 697 aa17.28■□□□□ 0.36
NDRG1-222ENST00000522476 PNPLA6Q8IY17 1366 aa17.27■□□□□ 0.35
NDRG1-222ENST00000522476 NKTRP30414 1462 aaKnown RBP17.27■□□□□ 0.35
NDRG1-222ENST00000522476 AATKQ6ZMQ8 1374 aa17.26■□□□□ 0.35
NDRG1-222ENST00000522476 ROBO2Q9HCK4 1378 aa17.26■□□□□ 0.35
NDRG1-222ENST00000522476 U2AF1L5P0DN76 240 aaPredicted RBP17.25■□□□□ 0.35
NDRG1-222ENST00000522476 KCNA6P17658 529 aa17.25■□□□□ 0.35
NDRG1-222ENST00000522476 U2AF1Q01081 240 aaKnown RBP eCLIP17.25■□□□□ 0.35
NDRG1-222ENST00000522476 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
NDRG1-222ENST00000522476 MSH6P52701 1360 aa17.24■□□□□ 0.35
NDRG1-222ENST00000522476 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
NDRG1-222ENST00000522476 PLEKHG3A1L390 1219 aa17.24■□□□□ 0.35
NDRG1-222ENST00000522476 DIAPH1O60610 1272 aaKnown RBP17.24■□□□□ 0.35
NDRG1-222ENST00000522476 NEFMP07197 916 aa17.24■□□□□ 0.35
NDRG1-222ENST00000522476 COL3A1P02461 1466 aaPredicted RBP17.23■□□□□ 0.35
NDRG1-222ENST00000522476 WWC1Q8IX03 1113 aa17.23■□□□□ 0.35
NDRG1-222ENST00000522476 TCP11L2Q8N4U5 519 aa17.23■□□□□ 0.35
NDRG1-222ENST00000522476 COG3Q96JB2 828 aa17.23■□□□□ 0.35
NDRG1-222ENST00000522476 MAPK8IP3Q9UPT6 1336 aa17.22■□□□□ 0.35
NDRG1-222ENST00000522476 YY1P25490 414 aa17.22■□□□□ 0.35
NDRG1-222ENST00000522476 CCDC125Q86Z20 511 aa17.22■□□□□ 0.35
NDRG1-222ENST00000522476 NGLY1Q96IV0 654 aa17.22■□□□□ 0.35
NDRG1-222ENST00000522476 AMOTL2Q9Y2J4 779 aa17.22■□□□□ 0.35
NDRG1-222ENST00000522476 EP400Q96L91 3159 aa17.22■□□□□ 0.35
NDRG1-222ENST00000522476 MON2Q7Z3U7 1717 aa17.22■□□□□ 0.35
NDRG1-222ENST00000522476 LRP5O75197 1615 aa17.21■□□□□ 0.35
NDRG1-222ENST00000522476 B4GALNT3Q6L9W6 998 aa17.21■□□□□ 0.35
NDRG1-222ENST00000522476 MYH16Q9H6N6 1097 aa17.21■□□□□ 0.35
NDRG1-222ENST00000522476 ITSN1Q15811 1721 aa17.2■□□□□ 0.34
NDRG1-222ENST00000522476 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
NDRG1-222ENST00000522476 FCHSD2O94868 740 aa17.19■□□□□ 0.34
NDRG1-222ENST00000522476 AKAP12Q02952 1782 aa17.19■□□□□ 0.34
NDRG1-222ENST00000522476 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
NDRG1-222ENST00000522476 PTPRUQ92729 1446 aa17.19■□□□□ 0.34
NDRG1-222ENST00000522476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.341e-7■□□□□ 9.2
NDRG1-222ENST00000522476 C8orf37Q96NL8 207 aa17.18■□□□□ 0.34
NDRG1-222ENST00000522476 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
NDRG1-222ENST00000522476 TOPAZ1Q8N9V7 1692 aa17.18■□□□□ 0.34
NDRG1-222ENST00000522476 IL16Q14005 1332 aa17.18■□□□□ 0.34
NDRG1-222ENST00000522476 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
NDRG1-222ENST00000522476 TTC21AQ8NDW8 1320 aa17.17■□□□□ 0.34
NDRG1-222ENST00000522476 POLKQ9UBT6 870 aa17.16■□□□□ 0.34
NDRG1-222ENST00000522476 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
NDRG1-222ENST00000522476 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.16■□□□□ 0.34
NDRG1-222ENST00000522476 AAMPQ13685 434 aa17.15■□□□□ 0.34
NDRG1-222ENST00000522476 PRR36Q9H6K5 1346 aa17.15■□□□□ 0.34
NDRG1-222ENST00000522476 CALD1Q05682 793 aaKnown RBP17.15■□□□□ 0.34
NDRG1-222ENST00000522476 EXOC6Q8TAG9 804 aa17.15■□□□□ 0.34
NDRG1-222ENST00000522476 PLEKHF1Q96S99 279 aa17.15■□□□□ 0.34
NDRG1-222ENST00000522476 TTC21BQ7Z4L5 1316 aa17.14■□□□□ 0.33
NDRG1-222ENST00000522476 USP6P35125 1406 aa17.13■□□□□ 0.33
NDRG1-222ENST00000522476 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
NDRG1-222ENST00000522476 ACEP12821 1306 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms