RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 PNPLA6Q8IY17 1366 aa33.96■■■■□ 3.03
COL13A1-214ENST00000522165 AMOTL2Q9Y2J4 779 aa33.95■■■■□ 3.03
COL13A1-214ENST00000522165 DMRT2Q9Y5R5 561 aa33.95■■■■□ 3.03
COL13A1-214ENST00000522165 AKAP12Q02952 1782 aa33.95■■■■□ 3.02
COL13A1-214ENST00000522165 CCDC136Q96JN2 1154 aa33.94■■■■□ 3.02
COL13A1-214ENST00000522165 PTCH1Q13635 1447 aa33.93■■■■□ 3.02
COL13A1-214ENST00000522165 EXOC6Q8TAG9 804 aa33.93■■■■□ 3.02
COL13A1-214ENST00000522165 PHF23Q9BUL5 403 aaPredicted RBP33.93■■■■□ 3.02
COL13A1-214ENST00000522165 NKTRP30414 1462 aaKnown RBP33.93■■■■□ 3.02
COL13A1-214ENST00000522165 ITSN1Q15811 1721 aa33.92■■■■□ 3.02
COL13A1-214ENST00000522165 PLIN1O60240 522 aa33.91■■■■□ 3.02
COL13A1-214ENST00000522165 NCBP3Q53F19 620 aaKnown RBP33.91■■■■□ 3.02
COL13A1-214ENST00000522165 ZNF692Q9BU19 519 aaPredicted RBP33.9■■■■□ 3.02
COL13A1-214ENST00000522165 RRP7AQ9Y3A4 280 aaKnown RBP33.9■■■■□ 3.02
COL13A1-214ENST00000522165 TOPAZ1Q8N9V7 1692 aa33.9■■■■□ 3.02
COL13A1-214ENST00000522165 NEUROD2Q15784 382 aa33.89■■■■□ 3.02
COL13A1-214ENST00000522165 CCDC27Q2M243 656 aa33.89■■■■□ 3.02
COL13A1-214ENST00000522165 NME9Q86XW9 330 aa33.89■■■■□ 3.02
COL13A1-214ENST00000522165 ADAMTSL3P82987 1691 aa33.89■■■■□ 3.02
COL13A1-214ENST00000522165 U2SURPO15042 1029 aaKnown RBP33.87■■■■□ 3.01
COL13A1-214ENST00000522165 DIAPH1O60610 1272 aaKnown RBP33.87■■■■□ 3.01
COL13A1-214ENST00000522165 POLKQ9UBT6 870 aa33.87■■■■□ 3.01
COL13A1-214ENST00000522165 DNAJC5Q9H3Z4 198 aa33.86■■■■□ 3.01
COL13A1-214ENST00000522165 XRN1Q8IZH2 1706 aaKnown RBP33.85■■■■□ 3.01
COL13A1-214ENST00000522165 WDR63Q8IWG1 891 aa33.84■■■■□ 3.01
COL13A1-214ENST00000522165 PLEKHF1Q96S99 279 aa33.84■■■■□ 3.01
COL13A1-214ENST00000522165 PLEKHG3A1L390 1219 aa33.84■■■■□ 3.01
COL13A1-214ENST00000522165 MAP2P11137 1827 aaKnown RBP33.82■■■■□ 3.01
COL13A1-214ENST00000522165 FBLN1P23142 703 aa33.82■■■■□ 3
COL13A1-214ENST00000522165 ZNF142P52746 1687 aaPredicted RBP33.82■■■■□ 3
COL13A1-214ENST00000522165 ZRANB1Q9UGI0 708 aa33.81■■■■□ 3
COL13A1-214ENST00000522165 AATKQ6ZMQ8 1374 aa33.81■■■■□ 3
COL13A1-214ENST00000522165 COG3Q96JB2 828 aa33.8■■■■□ 3
COL13A1-214ENST00000522165 PIK3R4Q99570 1358 aa33.8■■■■□ 3
COL13A1-214ENST00000522165 ACEP12821 1306 aa33.79■■■■□ 3
COL13A1-214ENST00000522165 NRKQ7Z2Y5 1582 aa33.78■■■■□ 3
COL13A1-214ENST00000522165 NUTM2FA1L443 756 aa33.77■■■■□ 3
COL13A1-214ENST00000522165 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.77■■■■□ 3
COL13A1-214ENST00000522165 CRBNQ96SW2 442 aa33.77■■■■□ 3
COL13A1-214ENST00000522165 PPM1GO15355 546 aaPredicted RBP33.76■■■□□ 2.99
COL13A1-214ENST00000522165 C20orf194Q5TEA3 1177 aa33.75■■■□□ 2.99
COL13A1-214ENST00000522165 EMILIN1Q9Y6C2 1016 aa33.75■■■□□ 2.99
COL13A1-214ENST00000522165 TTC21BQ7Z4L5 1316 aa33.74■■■□□ 2.99
COL13A1-214ENST00000522165 PNNQ9H307 717 aaKnown RBP33.74■■■□□ 2.99
COL13A1-214ENST00000522165 CDK12Q9NYV4 1490 aaPredicted RBP33.74■■■□□ 2.99
COL13A1-214ENST00000522165 ANKLE2Q86XL3 938 aa33.73■■■□□ 2.99
COL13A1-214ENST00000522165 MAPK8IP3Q9UPT6 1336 aa33.73■■■□□ 2.99
COL13A1-214ENST00000522165 USP6P35125 1406 aa33.73■■■□□ 2.99
COL13A1-214ENST00000522165 KCNA6P17658 529 aa33.72■■■□□ 2.99
COL13A1-214ENST00000522165 TMPOP42166 694 aaKnown RBP33.72■■■□□ 2.99
COL13A1-214ENST00000522165 SETD1BQ9UPS6 1966 aaKnown RBP33.71■■■□□ 2.99
COL13A1-214ENST00000522165 FCHSD2O94868 740 aa33.71■■■□□ 2.99
COL13A1-214ENST00000522165 RBM19Q9Y4C8 960 aaKnown RBP33.7■■■□□ 2.99
COL13A1-214ENST00000522165 BCAR3O75815 825 aa33.68■■■□□ 2.98
COL13A1-214ENST00000522165 LRRC7Q96NW7 1537 aa33.67■■■□□ 2.98
COL13A1-214ENST00000522165 SSH2Q76I76 1423 aa33.67■■■□□ 2.98
COL13A1-214ENST00000522165 RSPH6AQ9H0K4 717 aa33.66■■■□□ 2.98
COL13A1-214ENST00000522165 MYH16Q9H6N6 1097 aa33.66■■■□□ 2.98
COL13A1-214ENST00000522165 TRIM35Q9UPQ4 493 aa33.66■■■□□ 2.98
COL13A1-214ENST00000522165 IL13P35225 146 aa33.65■■■□□ 2.98
COL13A1-214ENST00000522165 OVOS2A0A0J9YW53 1432 aa33.65■■■□□ 2.98
COL13A1-214ENST00000522165 OVOS2Q6IE36 1432 aa33.65■■■□□ 2.98
COL13A1-214ENST00000522165 RRS1Q15050 365 aaKnown RBP33.64■■■□□ 2.98
COL13A1-214ENST00000522165 RGPD8O14715 1765 aaPredicted RBP33.63■■■□□ 2.97
COL13A1-214ENST00000522165 CHD2O14647 1828 aaKnown RBP33.63■■■□□ 2.97
COL13A1-214ENST00000522165 ANKARQ7Z5J8 1434 aa33.62■■■□□ 2.97
COL13A1-214ENST00000522165 PMFBP1Q8TBY8 1022 aa33.61■■■□□ 2.97
COL13A1-214ENST00000522165 PRKAR2BP31323 418 aa33.6■■■□□ 2.97
COL13A1-214ENST00000522165 RIPK4P57078 832 aa33.6■■■□□ 2.97
COL13A1-214ENST00000522165 NALCNQ8IZF0 1738 aa33.59■■■□□ 2.97
COL13A1-214ENST00000522165 TTC21AQ8NDW8 1320 aa33.59■■■□□ 2.97
COL13A1-214ENST00000522165 FMN2Q9NZ56 1722 aa33.58■■■□□ 2.97
COL13A1-214ENST00000522165 IL16Q14005 1332 aa33.57■■■□□ 2.96
COL13A1-214ENST00000522165 RARSP54136 660 aaKnown RBP33.57■■■□□ 2.96
COL13A1-214ENST00000522165 USP31Q70CQ4 1352 aa33.57■■■□□ 2.96
COL13A1-214ENST00000522165 NGDNQ8NEJ9 315 aaKnown RBP33.56■■■□□ 2.96
COL13A1-214ENST00000522165 NEFMP07197 916 aa33.55■■■□□ 2.96
COL13A1-214ENST00000522165 HMOX1P09601 288 aa33.55■■■□□ 2.96
COL13A1-214ENST00000522165 FANCIQ9NVI1 1328 aa33.53■■■□□ 2.96
COL13A1-214ENST00000522165 PDE3AQ14432 1141 aa33.52■■■□□ 2.96
COL13A1-214ENST00000522165 PHACTR3Q96KR7 559 aa33.51■■■□□ 2.95
COL13A1-214ENST00000522165 NPHP4O75161 1426 aaPredicted RBP33.5■■■□□ 2.95
COL13A1-214ENST00000522165 NFE2L2Q16236 605 aa33.49■■■□□ 2.95
COL13A1-214ENST00000522165 TSR2Q969E8 191 aaKnown RBP33.49■■■□□ 2.95
COL13A1-214ENST00000522165 CT47B1P0C2W7 299 aaPredicted RBP33.49■■■□□ 2.95
COL13A1-214ENST00000522165 PEAK1Q9H792 1746 aa33.46■■■□□ 2.95
COL13A1-214ENST00000522165 CANXP27824 592 aaKnown RBP33.46■■■□□ 2.95
COL13A1-214ENST00000522165 EIF4A2Q14240 407 aaKnown RBP33.45■■■□□ 2.95
COL13A1-214ENST00000522165 PIK3C2AO00443 1686 aa33.44■■■□□ 2.94
COL13A1-214ENST00000522165 EXOSC9Q06265 439 aaKnown RBP33.43■■■□□ 2.94
COL13A1-214ENST00000522165 KDM2BQ8NHM5 1336 aa33.42■■■□□ 2.94
COL13A1-214ENST00000522165 FRAT1Q92837 279 aaPredicted RBP33.41■■■□□ 2.94
COL13A1-214ENST00000522165 ADGRL3Q9HAR2 1447 aa33.4■■■□□ 2.94
COL13A1-214ENST00000522165 PANK1Q8TE04 598 aa33.39■■■□□ 2.94
COL13A1-214ENST00000522165 BCL2L13Q9BXK5 485 aa33.39■■■□□ 2.94
COL13A1-214ENST00000522165 HSP90AB2PQ58FF8 381 aa33.38■■■□□ 2.93
COL13A1-214ENST00000522165 MAP3K19Q56UN5 1328 aa33.38■■■□□ 2.93
COL13A1-214ENST00000522165 SOX12O15370 315 aa33.37■■■□□ 2.93
COL13A1-214ENST00000522165 RBM33Q96EV2 1170 aaKnown RBP33.37■■■□□ 2.93
COL13A1-214ENST00000522165 CENPQQ7L2Z9 268 aaPredicted RBP33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms