RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 THAP11Q96EK4 314 aa8.68□□□□□ -1.02
CTNNA1-233ENST00000522052 TMEM88BA6NKF7 163 aa8.67□□□□□ -1.02
CTNNA1-233ENST00000522052 JUNDP17535 347 aa8.67□□□□□ -1.02
CTNNA1-233ENST00000522052 PPP4CP60510 307 aa8.67□□□□□ -1.02
CTNNA1-233ENST00000522052 PTPRNQ16849 979 aa8.67□□□□□ -1.02
CTNNA1-233ENST00000522052 NFATC2IPQ8NCF5 419 aa8.67□□□□□ -1.02
CTNNA1-233ENST00000522052 ANKK1Q8NFD2 765 aa8.67□□□□□ -1.02
CTNNA1-233ENST00000522052 SOWAHBA6NEL2 793 aa8.66□□□□□ -1.02
CTNNA1-233ENST00000522052 HRO43593 1189 aa8.66□□□□□ -1.02
CTNNA1-233ENST00000522052 NR1I2O75469 434 aa8.66□□□□□ -1.02
CTNNA1-233ENST00000522052 APLP1P51693 650 aa8.66□□□□□ -1.02
CTNNA1-233ENST00000522052 LSM11P83369 360 aaKnown RBP eCLIP8.66□□□□□ -1.02
CTNNA1-233ENST00000522052 VRTNQ9H8Y1 702 aa8.66□□□□□ -1.02
CTNNA1-233ENST00000522052 KANK4Q5T7N3 995 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-233ENST00000522052 HS3ST6Q96QI5 342 aa8.65□□□□□ -1.02
CTNNA1-233ENST00000522052 MAP10Q9P2G4 905 aa8.65□□□□□ -1.02
CTNNA1-233ENST00000522052 TSR3Q9UJK0 312 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-233ENST00000522052 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.02
CTNNA1-233ENST00000522052 PCDHB3Q9Y5E6 796 aa8.65□□□□□ -1.02
CTNNA1-233ENST00000522052 GOLGA8CPA6NN73 597 aa8.64□□□□□ -1.03
CTNNA1-233ENST00000522052 PIK3CDO00329 1044 aa8.64□□□□□ -1.03
CTNNA1-233ENST00000522052 ELOAQ14241 798 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-233ENST00000522052 FAM163AQ96GL9 167 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-233ENST00000522052 MTMR7Q9Y216 660 aa8.64□□□□□ -1.03
CTNNA1-233ENST00000522052 POTEB3A0JP26 581 aa8.63□□□□□ -1.03
CTNNA1-233ENST00000522052 POTEBQ6S5H4 581 aa8.63□□□□□ -1.03
CTNNA1-233ENST00000522052 STAC3Q96MF2 364 aa8.63□□□□□ -1.03
CTNNA1-233ENST00000522052 CTHP32929 405 aa8.62□□□□□ -1.03
CTNNA1-233ENST00000522052 BCAMP50895 628 aa8.62□□□□□ -1.03
CTNNA1-233ENST00000522052 MSS51Q4VC12 460 aa8.62□□□□□ -1.03
CTNNA1-233ENST00000522052 PLEKHM2Q8IWE5 1019 aa8.62□□□□□ -1.03
CTNNA1-233ENST00000522052 GPSM3Q9Y4H4 160 aa8.62□□□□□ -1.03
CTNNA1-233ENST00000522052 IVNS1ABPQ9Y6Y0 642 aa8.62□□□□□ -1.03
CTNNA1-233ENST00000522052 USP17L3A6NCW0 530 aa8.61□□□□□ -1.03
CTNNA1-233ENST00000522052 USP17L4A6NCW7 530 aa8.61□□□□□ -1.03
CTNNA1-233ENST00000522052 CCNYL3P0C7X3 344 aa8.61□□□□□ -1.03
CTNNA1-233ENST00000522052 SKIP12755 728 aa8.61□□□□□ -1.03
CTNNA1-233ENST00000522052 LCE2DQ5TA82 110 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-233ENST00000522052 USP17L2Q6R6M4 530 aa8.61□□□□□ -1.03
CTNNA1-233ENST00000522052 USP17L1Q7RTZ2 530 aa8.61□□□□□ -1.03
CTNNA1-233ENST00000522052 ARMC2Q8NEN0 867 aa8.61□□□□□ -1.03
CTNNA1-233ENST00000522052 ZNF592Q92610 1267 aa8.61□□□□□ -1.03
CTNNA1-233ENST00000522052 GPKOWQ92917 476 aaPredicted RBP eCLIP8.61□□□□□ -1.03
CTNNA1-233ENST00000522052 USP17L5A8MUK1 530 aa8.6□□□□□ -1.03
CTNNA1-233ENST00000522052 DXOO77932 396 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-233ENST00000522052 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-233ENST00000522052 PTK2Q05397 1052 aa8.6□□□□□ -1.03
CTNNA1-233ENST00000522052 B4GALNT3Q6L9W6 998 aa8.6□□□□□ -1.03
CTNNA1-233ENST00000522052 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
CTNNA1-233ENST00000522052 EVA1BQ9NVM1 165 aa8.6□□□□□ -1.03
CTNNA1-233ENST00000522052 KCNH2Q12809 1159 aa8.59□□□□□ -1.03
CTNNA1-233ENST00000522052 FAM174AQ8TBP5 190 aa8.59□□□□□ -1.03
CTNNA1-233ENST00000522052 WNT2BQ93097 391 aa8.59□□□□□ -1.03
CTNNA1-233ENST00000522052 ZMIZ1Q9ULJ6 1067 aa8.59□□□□□ -1.03
CTNNA1-233ENST00000522052 MMP16P51512 607 aa8.58□□□□□ -1.04
CTNNA1-233ENST00000522052 FAM160A2Q8N612 972 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-233ENST00000522052 NUDT12Q9BQG2 462 aa8.58□□□□□ -1.04
CTNNA1-233ENST00000522052 CEP126Q9P2H0 1117 aa8.58□□□□□ -1.04
CTNNA1-233ENST00000522052 NOVA2Q9UNW9 492 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-233ENST00000522052 FAM196BA6NMK8 535 aa8.57□□□□□ -1.04
CTNNA1-233ENST00000522052 SLFNL1Q499Z3 407 aa8.57□□□□□ -1.04
CTNNA1-233ENST00000522052 NBPF14Q5TI25 921 aa8.57□□□□□ -1.04
CTNNA1-233ENST00000522052 TMEM164Q5U3C3 297 aa8.57□□□□□ -1.04
CTNNA1-233ENST00000522052 STK32AQ8WU08 396 aa8.57□□□□□ -1.04
CTNNA1-233ENST00000522052 SPSB2Q99619 263 aa8.57□□□□□ -1.04
CTNNA1-233ENST00000522052 OCSTAMPQ9BR26 566 aa8.57□□□□□ -1.04
CTNNA1-233ENST00000522052 GNEQ9Y223 722 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-233ENST00000522052 FOXD4L5Q5VV16 416 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-233ENST00000522052 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
CTNNA1-233ENST00000522052 SND1Q7KZF4 910 aaKnown RBP eCLIP8.56□□□□□ -1.04
CTNNA1-233ENST00000522052 DEPDC4Q8N2C3 294 aa8.56□□□□□ -1.04
CTNNA1-233ENST00000522052 FOXD4L4Q8WXT5 416 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-233ENST00000522052 MKRN1Q9UHC7 482 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L15C9J2P7 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L10C9JJH3 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L13C9JLJ4 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L12C9JPN9 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L11C9JVI0 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L21D6R901 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L18D6R9N7 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L22D6RA61 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L17D6RBQ6 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L19D6RCP7 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L20D6RJB6 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 LZTS3O60299 673 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 USP17L24Q0WX57 530 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 RNF135Q8IUD6 432 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 PHTF2Q8N3S3 785 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 WBP1LQ9NX94 342 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 PCDHB9Q9Y5E1 797 aa8.55□□□□□ -1.04
CTNNA1-233ENST00000522052 ATP5J2-PTCD1G3V325 749 aa8.54□□□□□ -1.04
CTNNA1-233ENST00000522052 NCOA4Q13772 614 aa8.54□□□□□ -1.04
CTNNA1-233ENST00000522052 CCDC27Q2M243 656 aa8.54□□□□□ -1.04
CTNNA1-233ENST00000522052 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-233ENST00000522052 LARP1Q6PKG0 1096 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-233ENST00000522052 PTK7Q13308 1070 aa8.53□□□□□ -1.04
CTNNA1-233ENST00000522052 PLPP7Q8NBV4 271 aa8.53□□□□□ -1.04
CTNNA1-233ENST00000522052 ARHGAP9Q9BRR9 750 aa8.53□□□□□ -1.04
CTNNA1-233ENST00000522052 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
CTNNA1-233ENST00000522052 CHIC2Q9UKJ5 165 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms