RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 WWC1Q8IX03 1113 aa10.33□□□□□ -0.76
SKP1-208ENST00000521216 A6NJR5 290 aa10.32□□□□□ -0.76
SKP1-208ENST00000521216 ANKLE1Q8NAG6 615 aa10.32□□□□□ -0.76
SKP1-208ENST00000521216 FKBPLQ9UIM3 349 aa10.32□□□□□ -0.76
SKP1-208ENST00000521216 SUPT5HO00267 1087 aaKnown RBP10.31□□□□□ -0.76
SKP1-208ENST00000521216 ARMC2Q8NEN0 867 aa10.31□□□□□ -0.76
SKP1-208ENST00000521216 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
SKP1-208ENST00000521216 PLA2G2CQ5R387 149 aa10.29□□□□□ -0.76
SKP1-208ENST00000521216 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
SKP1-208ENST00000521216 BAP1Q92560 729 aa10.29□□□□□ -0.76
SKP1-208ENST00000521216 ZNF330Q9Y3S2 320 aaPredicted RBP10.29□□□□□ -0.76
SKP1-208ENST00000521216 TRAK2O60296 914 aa10.28□□□□□ -0.76
SKP1-208ENST00000521216 IRF5Q13568 498 aa10.27□□□□□ -0.77
SKP1-208ENST00000521216 AGERQ15109 404 aa10.27□□□□□ -0.77
SKP1-208ENST00000521216 NBPF14Q5TI25 921 aa10.27□□□□□ -0.77
SKP1-208ENST00000521216 GPR37L1O60883 481 aa10.26□□□□□ -0.77
SKP1-208ENST00000521216 VAC14Q08AM6 782 aa10.26□□□□□ -0.77
SKP1-208ENST00000521216 ZNF777Q9ULD5 760 aaPredicted RBP10.26□□□□□ -0.77
SKP1-208ENST00000521216 FNBP4Q8N3X1 1017 aaPredicted RBP10.25□□□□□ -0.77
SKP1-208ENST00000521216 A0A0G2JS52 829 aa10.24□□□□□ -0.77
SKP1-208ENST00000521216 PTK2Q05397 1052 aa10.24□□□□□ -0.77
SKP1-208ENST00000521216 TRIM32Q13049 653 aa10.24□□□□□ -0.77
SKP1-208ENST00000521216 WASHC4Q2M389 1173 aa10.24□□□□□ -0.77
SKP1-208ENST00000521216 PDXDC2PQ6P474 469 aa10.24□□□□□ -0.77
SKP1-208ENST00000521216 ZC3H4Q9UPT8 1303 aaKnown RBP10.24□□□□□ -0.77
SKP1-208ENST00000521216 MAGEB6P1A0A0J9YX57 407 aa10.23□□□□□ -0.77
SKP1-208ENST00000521216 ARID3CA6NKF2 412 aa10.23□□□□□ -0.77
SKP1-208ENST00000521216 CD2BP2O95400 341 aaKnown RBP10.23□□□□□ -0.77
SKP1-208ENST00000521216 LIAT1Q6ZQX7 453 aa10.23□□□□□ -0.77
SKP1-208ENST00000521216 GPKOWQ92917 476 aaPredicted RBP eCLIP10.23□□□□□ -0.77
SKP1-208ENST00000521216 ZBBXA8MT70 800 aa10.22□□□□□ -0.77
SKP1-208ENST00000521216 FBXO45P0C2W1 286 aa10.22□□□□□ -0.77
SKP1-208ENST00000521216 SLC19A1P41440 591 aa10.22□□□□□ -0.77
SKP1-208ENST00000521216 RPIAP49247 311 aa10.22□□□□□ -0.77
SKP1-208ENST00000521216 ZNF511Q8NB15 262 aa10.22□□□□□ -0.77
SKP1-208ENST00000521216 FOXJ1Q92949 421 aa10.22□□□□□ -0.77
SKP1-208ENST00000521216 ARHGAP9Q9BRR9 750 aa10.22□□□□□ -0.77
SKP1-208ENST00000521216 CARD14Q9BXL6 1004 aa10.22□□□□□ -0.77
SKP1-208ENST00000521216 POM121CA8CG34 1229 aa10.21□□□□□ -0.77
SKP1-208ENST00000521216 SH3BP2P78314 561 aa10.21□□□□□ -0.77
SKP1-208ENST00000521216 NR1H3Q13133 447 aa10.21□□□□□ -0.77
SKP1-208ENST00000521216 ZBTB33Q86T24 672 aa10.21□□□□□ -0.77
SKP1-208ENST00000521216 BPHLQ86WA6 291 aaPredicted RBP10.2□□□□□ -0.78
SKP1-208ENST00000521216 SH3BP5LQ7L8J4 393 aa10.18□□□□□ -0.78
SKP1-208ENST00000521216 ADAM32Q8TC27 787 aa10.18□□□□□ -0.78
SKP1-208ENST00000521216 EMID1Q96A84 441 aaPredicted RBP10.18□□□□□ -0.78
SKP1-208ENST00000521216 PRKD2Q9BZL6 878 aa10.18□□□□□ -0.78
SKP1-208ENST00000521216 GPSM3Q9Y4H4 160 aa10.18□□□□□ -0.78
SKP1-208ENST00000521216 EIF4G2P78344 907 aaKnown RBP eCLIP10.17□□□□□ -0.78
SKP1-208ENST00000521216 SKOR1P84550 965 aa10.17□□□□□ -0.78
SKP1-208ENST00000521216 SEMA3FQ13275 785 aa10.17□□□□□ -0.78
SKP1-208ENST00000521216 HDGFL1Q5TGJ6 251 aa10.16□□□□□ -0.78
SKP1-208ENST00000521216 CALR3Q96L12 384 aaKnown RBP10.16□□□□□ -0.78
SKP1-208ENST00000521216 OCSTAMPQ9BR26 566 aa10.16□□□□□ -0.78
SKP1-208ENST00000521216 PCDHB9Q9Y5E1 797 aa10.16□□□□□ -0.78
SKP1-208ENST00000521216 WNT7BP56706 349 aa10.15□□□□□ -0.78
SKP1-208ENST00000521216 C4orf48Q5BLP8 95 aa10.15□□□□□ -0.78
SKP1-208ENST00000521216 EHBP1Q8NDI1 1231 aa10.15□□□□□ -0.78
SKP1-208ENST00000521216 RC3H1Q5TC82 1133 aaKnown RBP10.14□□□□□ -0.79
SKP1-208ENST00000521216 SPRYD7Q5W111 196 aa10.14□□□□□ -0.79
SKP1-208ENST00000521216 SH3RF1Q7Z6J0 888 aa10.14□□□□□ -0.79
SKP1-208ENST00000521216 DZIP3Q86Y13 1208 aaKnown RBP10.14□□□□□ -0.79
SKP1-208ENST00000521216 GLMNQ92990 594 aa10.14□□□□□ -0.79
SKP1-208ENST00000521216 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
SKP1-208ENST00000521216 FOXC1Q12948 553 aa10.12□□□□□ -0.79
SKP1-208ENST00000521216 ARID5BQ14865 1188 aa10.12□□□□□ -0.79
SKP1-208ENST00000521216 ERFEQ4G0M1 354 aa10.12□□□□□ -0.79
SKP1-208ENST00000521216 ARID3AQ99856 593 aa10.12□□□□□ -0.79
SKP1-208ENST00000521216 C1orf115Q9H7X2 142 aa10.12□□□□□ -0.79
SKP1-208ENST00000521216 VARSP26640 1264 aaKnown RBP10.11□□□□□ -0.79
SKP1-208ENST00000521216 SOX11P35716 441 aa10.11□□□□□ -0.79
SKP1-208ENST00000521216 FAM174AQ8TBP5 190 aa10.11□□□□□ -0.79
SKP1-208ENST00000521216 SLC10A4Q96EP9 437 aa10.11□□□□□ -0.79
SKP1-208ENST00000521216 ZNF598Q86UK7 904 aaKnown RBP10.1□□□□□ -0.79
SKP1-208ENST00000521216 ADAMTS19Q8TE59 1207 aa10.1□□□□□ -0.79
SKP1-208ENST00000521216 ALG2Q9H553 416 aa10.1□□□□□ -0.79
SKP1-208ENST00000521216 V9GY48 417 aaPredicted RBP10.1□□□□□ -0.79
SKP1-208ENST00000521216 ZNF592Q92610 1267 aa10.08□□□□□ -0.8
SKP1-208ENST00000521216 CCDC97Q96F63 343 aaPredicted RBP10.08□□□□□ -0.8
SKP1-208ENST00000521216 MRGPRX2Q96LB1 330 aa10.08□□□□□ -0.8
SKP1-208ENST00000521216 WNT7AO00755 349 aa10.07□□□□□ -0.8
SKP1-208ENST00000521216 MCCD1P59942 119 aaPredicted RBP10.07□□□□□ -0.8
SKP1-208ENST00000521216 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
SKP1-208ENST00000521216 C1QTNF2Q9BXJ5 285 aa10.06□□□□□ -0.8
SKP1-208ENST00000521216 TLL2Q9Y6L7 1015 aa10.06□□□□□ -0.8
SKP1-208ENST00000521216 RAB15P59190 212 aa10.05□□□□□ -0.8
SKP1-208ENST00000521216 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
SKP1-208ENST00000521216 VASH1Q7L8A9 365 aaPredicted RBP10.05□□□□□ -0.8
SKP1-208ENST00000521216 CEP126Q9P2H0 1117 aa10.05□□□□□ -0.8
SKP1-208ENST00000521216 TNFRSF10AO00220 468 aa10.04□□□□□ -0.8
SKP1-208ENST00000521216 GIGYF1O75420 1035 aaPredicted RBP10.04□□□□□ -0.8
SKP1-208ENST00000521216 TRMT44Q8IYL2 757 aaKnown RBP10.04□□□□□ -0.8
SKP1-208ENST00000521216 SERPINA10Q9UK55 444 aa10.04□□□□□ -0.8
SKP1-208ENST00000521216 NBPF20Q3BBV1 942 aa10.03□□□□□ -0.8
SKP1-208ENST00000521216 PKD2L1Q9P0L9 805 aa10.03□□□□□ -0.8
SKP1-208ENST00000521216 SIAH2O43255 324 aa10.02□□□□□ -0.81
SKP1-208ENST00000521216 ALDH1A1P00352 501 aa10.02□□□□□ -0.81
SKP1-208ENST00000521216 KCTD15Q96SI1 283 aaPredicted RBP10.02□□□□□ -0.81
SKP1-208ENST00000521216 CDV3Q9UKY7 258 aaKnown RBP10.02□□□□□ -0.81
SKP1-208ENST00000521216 TTC24A2A3L6 582 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms