RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 VPS72Q15906 364 aa22.76■■□□□ 1.23
CLN8-205ENST00000520991 CCDC61Q9Y6R9 512 aa22.76■■□□□ 1.23
CLN8-205ENST00000520991 EP400Q96L91 3159 aa22.76■■□□□ 1.23
CLN8-205ENST00000520991 SRPK2P78362 688 aaKnown RBP22.74■■□□□ 1.23
CLN8-205ENST00000520991 ACEP12821 1306 aa22.73■■□□□ 1.23
CLN8-205ENST00000520991 QRICH2Q9H0J4 1663 aa22.73■■□□□ 1.23
CLN8-205ENST00000520991 POLR3AO14802 1390 aaPredicted RBP22.73■■□□□ 1.23
CLN8-205ENST00000520991 COL14A1Q05707 1796 aaKnown RBP22.72■■□□□ 1.23
CLN8-205ENST00000520991 TRPM1Q7Z4N2 1603 aa22.71■■□□□ 1.23
CLN8-205ENST00000520991 CRYBG1Q9Y4K1 1723 aa22.71■■□□□ 1.23
CLN8-205ENST00000520991 PLEKHG3A1L390 1219 aa22.71■■□□□ 1.23
CLN8-205ENST00000520991 BTG4Q9NY30 223 aa22.71■■□□□ 1.23
CLN8-205ENST00000520991 NBPF8Q3BBV2 869 aa22.7■■□□□ 1.22
CLN8-205ENST00000520991 NRAPQ86VF7 1730 aa22.7■■□□□ 1.22
CLN8-205ENST00000520991 ROCK2O75116 1388 aaKnown RBP22.69■■□□□ 1.22
CLN8-205ENST00000520991 SEPT12Q8IYM1 358 aa22.69■■□□□ 1.22
CLN8-205ENST00000520991 CABP2Q9NPB3 220 aa22.69■■□□□ 1.22
CLN8-205ENST00000520991 PRDM11Q9NQV5 511 aa22.69■■□□□ 1.22
CLN8-205ENST00000520991 PPIP5K1Q6PFW1 1433 aa22.69■■□□□ 1.22
CLN8-205ENST00000520991 NUTM2GQ5VZR2 741 aa22.68■■□□□ 1.22
CLN8-205ENST00000520991 PHRF1Q9P1Y6 1649 aaKnown RBP22.67■■□□□ 1.22
CLN8-205ENST00000520991 A0A0G2JS52 829 aa22.66■■□□□ 1.22
CLN8-205ENST00000520991 MYT1Q01538 1121 aa22.66■■□□□ 1.22
CLN8-205ENST00000520991 BRWD3Q6RI45 1802 aa22.66■■□□□ 1.22
CLN8-205ENST00000520991 CCDC125Q86Z20 511 aa22.65■■□□□ 1.22
CLN8-205ENST00000520991 KIAA0232Q92628 1395 aa22.65■■□□□ 1.22
CLN8-205ENST00000520991 ABTB2Q8N961 1025 aa22.64■■□□□ 1.22
CLN8-205ENST00000520991 ONECUT3O60422 494 aaPredicted RBP22.63■■□□□ 1.21
CLN8-205ENST00000520991 EVC2Q86UK5 1308 aa22.63■■□□□ 1.21
CLN8-205ENST00000520991 ZC3H6P61129 1189 aaKnown RBP22.62■■□□□ 1.21
CLN8-205ENST00000520991 FAM98CQ17RN3 349 aaKnown RBP22.62■■□□□ 1.21
CLN8-205ENST00000520991 CHRNA2Q15822 529 aa22.61■■□□□ 1.21
CLN8-205ENST00000520991 KRT27Q7Z3Y8 459 aa22.61■■□□□ 1.21
CLN8-205ENST00000520991 CABP1Q9NZU7 370 aa22.6■■□□□ 1.21
CLN8-205ENST00000520991 SPATA31A5Q5VU36 1347 aa22.59■■□□□ 1.21
CLN8-205ENST00000520991 SPATA31A7Q8IWB4 1347 aa22.59■■□□□ 1.21
CLN8-205ENST00000520991 BLMP54132 1417 aaPredicted RBP22.59■■□□□ 1.21
CLN8-205ENST00000520991 BRD4O60885 1362 aaPredicted RBP22.58■■□□□ 1.21
CLN8-205ENST00000520991 TONSLQ96HA7 1378 aa22.58■■□□□ 1.21
CLN8-205ENST00000520991 NRKQ7Z2Y5 1582 aa22.58■■□□□ 1.21
CLN8-205ENST00000520991 NLRP13Q86W25 1043 aa22.57■■□□□ 1.2
CLN8-205ENST00000520991 USP6P35125 1406 aa22.57■■□□□ 1.2
CLN8-205ENST00000520991 USP19O94966 1318 aa22.57■■□□□ 1.2
CLN8-205ENST00000520991 SF3B2Q13435 895 aaKnown RBP22.57■■□□□ 1.2
CLN8-205ENST00000520991 STRN4Q9NRL3 753 aa22.57■■□□□ 1.2
CLN8-205ENST00000520991 TRIM26Q12899 539 aaPredicted RBP22.56■■□□□ 1.2
CLN8-205ENST00000520991 EVA1CP58658 441 aa22.54■■□□□ 1.2
CLN8-205ENST00000520991 CARD11Q9BXL7 1154 aa22.54■■□□□ 1.2
CLN8-205ENST00000520991 CPDO75976 1380 aa22.53■■□□□ 1.2
CLN8-205ENST00000520991 SPATA31A1Q5TZJ5 1347 aa22.53■■□□□ 1.2
CLN8-205ENST00000520991 GCP02774 474 aa22.53■■□□□ 1.2
CLN8-205ENST00000520991 ZRANB1Q9UGI0 708 aa22.53■■□□□ 1.2
CLN8-205ENST00000520991 THSD7AQ9UPZ6 1657 aa22.51■■□□□ 1.19
CLN8-205ENST00000520991 NLRP6P59044 892 aa22.51■■□□□ 1.19
CLN8-205ENST00000520991 USP35Q9P2H5 1018 aa22.5■■□□□ 1.19
CLN8-205ENST00000520991 SSH2Q76I76 1423 aa22.5■■□□□ 1.19
CLN8-205ENST00000520991 DEFB132Q7Z7B7 95 aa22.49■■□□□ 1.19
CLN8-205ENST00000520991 ZNF692Q9BU19 519 aaPredicted RBP22.49■■□□□ 1.19
CLN8-205ENST00000520991 CAMTA1Q9Y6Y1 1673 aa22.49■■□□□ 1.19
CLN8-205ENST00000520991 LMO7Q8WWI1 1683 aa22.48■■□□□ 1.19
CLN8-205ENST00000520991 ZBTB7CA1YPR0 619 aa22.48■■□□□ 1.19
CLN8-205ENST00000520991 SBNO2Q9Y2G9 1366 aa22.48■■□□□ 1.19
CLN8-205ENST00000520991 PIK3C2AO00443 1686 aa22.47■■□□□ 1.19
CLN8-205ENST00000520991 SLIT3O75094 1523 aa22.46■■□□□ 1.19
CLN8-205ENST00000520991 FAM182BQ5T319 152 aa22.46■■□□□ 1.19
CLN8-205ENST00000520991 LARP1Q6PKG0 1096 aaKnown RBP22.46■■□□□ 1.19
CLN8-205ENST00000520991 AKAP12Q02952 1782 aa22.46■■□□□ 1.19
CLN8-205ENST00000520991 SRCAPQ6ZRS2 3230 aa22.45■■□□□ 1.18
CLN8-205ENST00000520991 TTC21BQ7Z4L5 1316 aa22.45■■□□□ 1.18
CLN8-205ENST00000520991 KTN1Q86UP2 1357 aaKnown RBP22.43■■□□□ 1.18
CLN8-205ENST00000520991 BAG6P46379 1132 aa22.43■■□□□ 1.18
CLN8-205ENST00000520991 BARGINQ6ZT62 677 aa22.43■■□□□ 1.18
CLN8-205ENST00000520991 TTC21AQ8NDW8 1320 aa22.43■■□□□ 1.18
CLN8-205ENST00000520991 COL5A2P05997 1499 aaPredicted RBP22.43■■□□□ 1.18
CLN8-205ENST00000520991 TCP11L2Q8N4U5 519 aa22.42■■□□□ 1.18
CLN8-205ENST00000520991 CPSF1Q10570 1443 aaKnown RBP22.42■■□□□ 1.18
CLN8-205ENST00000520991 RGPD1P0DJD0 1748 aa22.41■■□□□ 1.18
CLN8-205ENST00000520991 AATKQ6ZMQ8 1374 aa22.41■■□□□ 1.18
CLN8-205ENST00000520991 SOX12O15370 315 aa22.39■■□□□ 1.18
CLN8-205ENST00000520991 PDE3BQ13370 1112 aa22.39■■□□□ 1.18
CLN8-205ENST00000520991 TMC1Q8TDI8 760 aa22.39■■□□□ 1.18
CLN8-205ENST00000520991 THRAP3Q9Y2W1 955 aaKnown RBP22.39■■□□□ 1.18
CLN8-205ENST00000520991 KCNH5Q8NCM2 988 aa22.38■■□□□ 1.17
CLN8-205ENST00000520991 CRB1P82279 1406 aa22.38■■□□□ 1.17
CLN8-205ENST00000520991 MON2Q7Z3U7 1717 aa22.38■■□□□ 1.17
CLN8-205ENST00000520991 FAM196AQ6ZSG2 479 aa22.37■■□□□ 1.17
CLN8-205ENST00000520991 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.36■■□□□ 1.17
CLN8-205ENST00000520991 HDGFL2Q7Z4V5 671 aaPredicted RBP22.35■■□□□ 1.17
CLN8-205ENST00000520991 EN1Q05925 392 aaPredicted RBP22.34■■□□□ 1.17
CLN8-205ENST00000520991 TOM1L2Q6ZVM7 507 aa22.34■■□□□ 1.17
CLN8-205ENST00000520991 ARHGEF25Q86VW2 580 aa22.34■■□□□ 1.17
CLN8-205ENST00000520991 TRIM37O94972 964 aa22.33■■□□□ 1.17
CLN8-205ENST00000520991 TNS1Q9HBL0 1735 aaKnown RBP22.33■■□□□ 1.17
CLN8-205ENST00000520991 COL18A1P39060 1754 aa22.33■■□□□ 1.17
CLN8-205ENST00000520991 CD163L1Q9NR16 1453 aa22.33■■□□□ 1.16
CLN8-205ENST00000520991 SLC12A5Q9H2X9 1139 aa22.32■■□□□ 1.16
CLN8-205ENST00000520991 PARP4Q9UKK3 1724 aaKnown RBP22.32■■□□□ 1.16
CLN8-205ENST00000520991 NFAT5O94916 1531 aa22.32■■□□□ 1.16
CLN8-205ENST00000520991 DISP2A7MBM2 1401 aa22.32■■□□□ 1.16
CLN8-205ENST00000520991 ST20-MTHFSA0A0A6YYL1 179 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms