RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 TBC1D2Q9BYX2 928 aa9.27□□□□□ -0.93
HDAC2-208ENST00000520746 PLEKHG3A1L390 1219 aa9.26□□□□□ -0.93
HDAC2-208ENST00000520746 SLC24A1O60721 1099 aa9.26□□□□□ -0.93
HDAC2-208ENST00000520746 GJA5P36382 358 aa9.26□□□□□ -0.93
HDAC2-208ENST00000520746 GMPRP36959 345 aa9.26□□□□□ -0.93
HDAC2-208ENST00000520746 VEGFBP49765 207 aa9.26□□□□□ -0.93
HDAC2-208ENST00000520746 RSBN1LQ6PCB5 846 aaPredicted RBP9.26□□□□□ -0.93
HDAC2-208ENST00000520746 LYPD8Q6UX82 237 aa9.26□□□□□ -0.93
HDAC2-208ENST00000520746 NPAS3Q8IXF0 933 aa9.26□□□□□ -0.93
HDAC2-208ENST00000520746 PCDHB15Q9Y5E8 787 aa9.25□□□□□ -0.93
HDAC2-208ENST00000520746 CFAP99D6REC4 459 aa9.24□□□□□ -0.93
HDAC2-208ENST00000520746 H3BM21 787 aa9.24□□□□□ -0.93
HDAC2-208ENST00000520746 TIMP2P16035 220 aa9.24□□□□□ -0.93
HDAC2-208ENST00000520746 CTHP32929 405 aa9.24□□□□□ -0.93
HDAC2-208ENST00000520746 PARP9Q8IXQ6 854 aa9.24□□□□□ -0.93
HDAC2-208ENST00000520746 IRF7Q92985 503 aa9.24□□□□□ -0.93
HDAC2-208ENST00000520746 LORP23490 312 aaPredicted RBP9.23□□□□□ -0.93
HDAC2-208ENST00000520746 MRPL14Q6P1L8 145 aaKnown RBP9.23□□□□□ -0.93
HDAC2-208ENST00000520746 MAP10Q9P2G4 905 aa9.23□□□□□ -0.93
HDAC2-208ENST00000520746 SPTLC1O15269 473 aa9.22□□□□□ -0.93
HDAC2-208ENST00000520746 ADH1CP00326 375 aa9.22□□□□□ -0.93
HDAC2-208ENST00000520746 F12P00748 615 aaPredicted RBP9.22□□□□□ -0.93
HDAC2-208ENST00000520746 HRCP23327 699 aa9.22□□□□□ -0.93
HDAC2-208ENST00000520746 WDR4P57081 412 aaKnown RBP9.22□□□□□ -0.93
HDAC2-208ENST00000520746 DIXDC1Q155Q3 683 aa9.22□□□□□ -0.93
HDAC2-208ENST00000520746 FAM174AQ8TBP5 190 aa9.22□□□□□ -0.93
HDAC2-208ENST00000520746 FOXJ1Q92949 421 aa9.22□□□□□ -0.93
HDAC2-208ENST00000520746 KLF16Q9BXK1 252 aaPredicted RBP9.22□□□□□ -0.93
HDAC2-208ENST00000520746 ERBB4Q15303 1308 aa9.22□□□□□ -0.93
HDAC2-208ENST00000520746 PURBQ96QR8 312 aaKnown RBP9.21□□□□□ -0.94
HDAC2-208ENST00000520746 CDK15Q96Q40 435 aa9.2□□□□□ -0.94
HDAC2-208ENST00000520746 ZBTB3Q9H5J0 574 aa9.2□□□□□ -0.94
HDAC2-208ENST00000520746 TRIM66O15016 1216 aa9.19□□□□□ -0.94
HDAC2-208ENST00000520746 SCARF1Q14162 830 aa9.19□□□□□ -0.94
HDAC2-208ENST00000520746 ZSCAN1Q8NBB4 408 aa9.19□□□□□ -0.94
HDAC2-208ENST00000520746 CABLES1Q8TDN4 633 aa9.19□□□□□ -0.94
HDAC2-208ENST00000520746 SOBPA7XYQ1 873 aa9.18□□□□□ -0.94
HDAC2-208ENST00000520746 PRPF38BQ5VTL8 546 aaKnown RBP9.18□□□□□ -0.94
HDAC2-208ENST00000520746 RIC3Q7Z5B4 369 aa9.18□□□□□ -0.94
HDAC2-208ENST00000520746 FAM181BA6NEQ2 426 aa9.17□□□□□ -0.94
HDAC2-208ENST00000520746 PER1O15534 1290 aaPredicted RBP9.17□□□□□ -0.94
HDAC2-208ENST00000520746 ARID5BQ14865 1188 aa9.17□□□□□ -0.94
HDAC2-208ENST00000520746 C4orf48Q5BLP8 95 aa9.17□□□□□ -0.94
HDAC2-208ENST00000520746 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
HDAC2-208ENST00000520746 ZIC2O95409 532 aaPredicted RBP9.16□□□□□ -0.94
HDAC2-208ENST00000520746 NR3C2P08235 984 aa9.16□□□□□ -0.94
HDAC2-208ENST00000520746 CSPP1Q1MSJ5 1256 aa9.16□□□□□ -0.94
HDAC2-208ENST00000520746 ITPKCQ96DU7 683 aa9.15□□□□□ -0.94
HDAC2-208ENST00000520746 LIMD1Q9UGP4 676 aa9.14□□□□□ -0.95
HDAC2-208ENST00000520746 VSIG8P0DPA2 414 aa9.13□□□□□ -0.95
HDAC2-208ENST00000520746 GRM5P41594 1212 aa9.13□□□□□ -0.95
HDAC2-208ENST00000520746 NR5A1Q13285 461 aa9.13□□□□□ -0.95
HDAC2-208ENST00000520746 AGERQ15109 404 aa9.13□□□□□ -0.95
HDAC2-208ENST00000520746 AK7Q96M32 723 aa9.13□□□□□ -0.95
HDAC2-208ENST00000520746 QPCTQ16769 361 aa9.12□□□□□ -0.95
HDAC2-208ENST00000520746 C6orf118Q5T5N4 469 aa9.12□□□□□ -0.95
HDAC2-208ENST00000520746 MYSM1Q5VVJ2 828 aa9.12□□□□□ -0.95
HDAC2-208ENST00000520746 BPHLQ86WA6 291 aaPredicted RBP9.12□□□□□ -0.95
HDAC2-208ENST00000520746 TSC1Q92574 1164 aa9.12□□□□□ -0.95
HDAC2-208ENST00000520746 C1QTNF2Q9BXJ5 285 aa9.11□□□□□ -0.95
HDAC2-208ENST00000520746 MEIOBQ8N635 442 aa9.1□□□□□ -0.95
HDAC2-208ENST00000520746 NUTM2BA6NNL0 878 aaPredicted RBP9.09□□□□□ -0.95
HDAC2-208ENST00000520746 NUTM2EB1AL46 878 aaPredicted RBP9.09□□□□□ -0.95
HDAC2-208ENST00000520746 MAN1A2O60476 641 aa9.09□□□□□ -0.95
HDAC2-208ENST00000520746 LILRB3O75022 631 aa9.09□□□□□ -0.95
HDAC2-208ENST00000520746 TUSC1Q2TAM9 212 aa9.09□□□□□ -0.95
HDAC2-208ENST00000520746 NUTM2DQ5VT03 806 aaPredicted RBP9.09□□□□□ -0.95
HDAC2-208ENST00000520746 SH3RF1Q7Z6J0 888 aa9.09□□□□□ -0.95
HDAC2-208ENST00000520746 NUTM2AQ8IVF1 878 aaPredicted RBP9.09□□□□□ -0.95
HDAC2-208ENST00000520746 LINC00528Q8N1L1 170 aa9.08□□□□□ -0.96
HDAC2-208ENST00000520746 BMP2P12643 396 aa9.07□□□□□ -0.96
HDAC2-208ENST00000520746 FSHRP23945 695 aa9.07□□□□□ -0.96
HDAC2-208ENST00000520746 PDE4DQ08499 809 aa9.07□□□□□ -0.96
HDAC2-208ENST00000520746 SH3BP5LQ7L8J4 393 aa9.07□□□□□ -0.96
HDAC2-208ENST00000520746 ARMC2Q8NEN0 867 aa9.07□□□□□ -0.96
HDAC2-208ENST00000520746 MAP4K5Q9Y4K4 846 aa9.07□□□□□ -0.96
HDAC2-208ENST00000520746 RTL5Q5HYW3 569 aaPredicted RBP9.06□□□□□ -0.96
HDAC2-208ENST00000520746 NBPF14Q5TI25 921 aa9.06□□□□□ -0.96
HDAC2-208ENST00000520746 SOS2Q07890 1332 aaPredicted RBP9.05□□□□□ -0.96
HDAC2-208ENST00000520746 PPFIA3O75145 1194 aa9.05□□□□□ -0.96
HDAC2-208ENST00000520746 UPP2O95045 317 aa9.05□□□□□ -0.96
HDAC2-208ENST00000520746 TRMT44Q8IYL2 757 aaKnown RBP9.05□□□□□ -0.96
HDAC2-208ENST00000520746 HELBQ8NG08 1087 aaPredicted RBP9.05□□□□□ -0.96
HDAC2-208ENST00000520746 DNMT3LQ9UJW3 386 aa9.05□□□□□ -0.96
HDAC2-208ENST00000520746 MAGEB6P1A0A0J9YX57 407 aa9.04□□□□□ -0.96
HDAC2-208ENST00000520746 VASH1Q7L8A9 365 aaPredicted RBP9.04□□□□□ -0.96
HDAC2-208ENST00000520746 CLK2P49760 499 aaKnown RBP9.02□□□□□ -0.97
HDAC2-208ENST00000520746 CARD14Q9BXL6 1004 aa9.02□□□□□ -0.97
HDAC2-208ENST00000520746 CCDC116Q8IYX3 515 aa9.01□□□□□ -0.97
HDAC2-208ENST00000520746 TSEN34Q9BSV6 310 aaKnown RBP9.01□□□□□ -0.97
HDAC2-208ENST00000520746 EMILIN1Q9Y6C2 1016 aa9.01□□□□□ -0.97
HDAC2-208ENST00000520746 ERFEQ4G0M1 354 aa9□□□□□ -0.97
HDAC2-208ENST00000520746 GPKOWQ92917 476 aaPredicted RBP eCLIP8.99□□□□□ -0.97
HDAC2-208ENST00000520746 SLC24A3Q9HC58 644 aa8.99□□□□□ -0.97
HDAC2-208ENST00000520746 POLR3EQ9NVU0 708 aa8.98□□□□□ -0.97
HDAC2-208ENST00000520746 TTLL8A6PVC2 850 aa8.97□□□□□ -0.97
HDAC2-208ENST00000520746 KRT76Q01546 638 aa8.97□□□□□ -0.97
HDAC2-208ENST00000520746 CTDSPL2Q05D32 466 aa8.97□□□□□ -0.97
HDAC2-208ENST00000520746 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.97□□□□□ -0.97
HDAC2-208ENST00000520746 PPP1R26Q5T8A7 1209 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms