RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 MED14O60244 1454 aa14.42□□□□□ -0.1
NUDCD1-203ENST00000519607 SEC24BO95487 1268 aa14.41□□□□□ -0.1
NUDCD1-203ENST00000519607 HDGFL2Q7Z4V5 671 aaPredicted RBP14.41□□□□□ -0.1
NUDCD1-203ENST00000519607 GGNBP2Q9H3C7 697 aa14.41□□□□□ -0.1
NUDCD1-203ENST00000519607 PLEKHF1Q96S99 279 aa14.41□□□□□ -0.1
NUDCD1-203ENST00000519607 TNNQ9UQP3 1299 aa14.41□□□□□ -0.1
NUDCD1-203ENST00000519607 MYO5BQ9ULV0 1848 aa14.4□□□□□ -0.1
NUDCD1-203ENST00000519607 EXOSC9Q06265 439 aaKnown RBP14.4□□□□□ -0.1
NUDCD1-203ENST00000519607 IPO8O15397 1037 aaKnown RBP14.4□□□□□ -0.1
NUDCD1-203ENST00000519607 FYB1O15117 783 aa14.39□□□□□ -0.11
NUDCD1-203ENST00000519607 DIAPH1O60610 1272 aaKnown RBP14.39□□□□□ -0.11
NUDCD1-203ENST00000519607 TSR2Q969E8 191 aaKnown RBP14.39□□□□□ -0.11
NUDCD1-203ENST00000519607 TBC1D32Q96NH3 1257 aa14.39□□□□□ -0.11
NUDCD1-203ENST00000519607 CLTCQ00610 1675 aaKnown RBP14.39□□□□□ -0.11
NUDCD1-203ENST00000519607 ATF7IPQ6VMQ6 1270 aa14.39□□□□□ -0.11
NUDCD1-203ENST00000519607 PREX1Q8TCU6 1659 aa14.39□□□□□ -0.11
NUDCD1-203ENST00000519607 MINK1Q8N4C8 1332 aaPredicted RBP14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 RICTORQ6R327 1708 aa14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 RIPK4P57078 832 aa14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 HDAC1Q13547 482 aaPredicted RBP14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 PRAM1Q96QH2 718 aa14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 TMEM131LA2VDJ0 1609 aa14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 PTPRMP28827 1452 aa14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 NLRP1Q9C000 1473 aa14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 KIF16BQ96L93 1317 aa14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 YTHDC2Q9H6S0 1430 aaKnown RBP14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 ITPRIPQ8IWB1 547 aa14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 IL27Q8NEV9 243 aa14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 TRIM35Q9UPQ4 493 aa14.38□□□□□ -0.11
NUDCD1-203ENST00000519607 COL3A1P02461 1466 aaPredicted RBP14.37□□□□□ -0.11
NUDCD1-203ENST00000519607 TRIM27P14373 513 aa14.37□□□□□ -0.11
NUDCD1-203ENST00000519607 SSH1Q8WYL5 1049 aa14.36□□□□□ -0.11
NUDCD1-203ENST00000519607 KIF20BQ96Q89 1820 aa14.35□□□□□ -0.11
NUDCD1-203ENST00000519607 FCHSD2O94868 740 aa14.35□□□□□ -0.11
NUDCD1-203ENST00000519607 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
NUDCD1-203ENST00000519607 ALDH1L2Q3SY69 923 aa14.35□□□□□ -0.11
NUDCD1-203ENST00000519607 ZNF428Q96B54 188 aa14.35□□□□□ -0.11
NUDCD1-203ENST00000519607 CHMP4BQ9H444 224 aaKnown RBP14.35□□□□□ -0.11
NUDCD1-203ENST00000519607 NOB1Q9ULX3 412 aaKnown RBP14.35□□□□□ -0.11
NUDCD1-203ENST00000519607 CDK19Q9BWU1 502 aa14.34□□□□□ -0.11
NUDCD1-203ENST00000519607 SLKQ9H2G2 1235 aaPredicted RBP14.34□□□□□ -0.11
NUDCD1-203ENST00000519607 PNPLA6Q8IY17 1366 aa14.34□□□□□ -0.11
NUDCD1-203ENST00000519607 CD163L1Q9NR16 1453 aa14.33□□□□□ -0.12
NUDCD1-203ENST00000519607 CALD1Q05682 793 aaKnown RBP14.32□□□□□ -0.12
NUDCD1-203ENST00000519607 SMC5Q8IY18 1101 aa14.32□□□□□ -0.12
NUDCD1-203ENST00000519607 CABP1Q9NZU7 370 aa14.32□□□□□ -0.12
NUDCD1-203ENST00000519607 ALKQ9UM73 1620 aa14.32□□□□□ -0.12
NUDCD1-203ENST00000519607 TBC1D2Q9BYX2 928 aa14.31□□□□□ -0.12
NUDCD1-203ENST00000519607 C22orf23Q9BZE7 217 aa14.31□□□□□ -0.12
NUDCD1-203ENST00000519607 YEATS2Q9ULM3 1422 aa14.31□□□□□ -0.12
NUDCD1-203ENST00000519607 TMEM57Q8N5G2 664 aa14.31□□□□□ -0.12
NUDCD1-203ENST00000519607 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
NUDCD1-203ENST00000519607 ANTXR1Q9H6X2 564 aa14.3□□□□□ -0.12
NUDCD1-203ENST00000519607 BRPF3Q9ULD4 1205 aa14.3□□□□□ -0.12
NUDCD1-203ENST00000519607 ARHGEF40Q8TER5 1519 aa14.3□□□□□ -0.12
NUDCD1-203ENST00000519607 CDC42BPGQ6DT37 1551 aa14.3□□□□□ -0.12
NUDCD1-203ENST00000519607 RTN4Q9NQC3 1192 aaKnown RBP14.29□□□□□ -0.12
NUDCD1-203ENST00000519607 MFAP1P55081 439 aaKnown RBP14.29□□□□□ -0.12
NUDCD1-203ENST00000519607 BRPF1P55201 1214 aaPredicted RBP14.29□□□□□ -0.12
NUDCD1-203ENST00000519607 MAP2P11137 1827 aaKnown RBP14.28□□□□□ -0.12
NUDCD1-203ENST00000519607 ATP7BP35670 1465 aa14.28□□□□□ -0.12
NUDCD1-203ENST00000519607 PRKAR2BP31323 418 aa14.28□□□□□ -0.12
NUDCD1-203ENST00000519607 PPP6R1Q9UPN7 881 aa14.28□□□□□ -0.12
NUDCD1-203ENST00000519607 DLC1Q96QB1 1528 aa14.27□□□□□ -0.12
NUDCD1-203ENST00000519607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.27□□□□□ -0.13
NUDCD1-203ENST00000519607 RSPH6AQ9H0K4 717 aa14.27□□□□□ -0.13
NUDCD1-203ENST00000519607 FAM135BQ49AJ0 1406 aa14.27□□□□□ -0.13
NUDCD1-203ENST00000519607 L1TD1Q5T7N2 865 aaKnown RBP14.26□□□□□ -0.13
NUDCD1-203ENST00000519607 FBXO31Q5XUX0 539 aaPredicted RBP14.26□□□□□ -0.13
NUDCD1-203ENST00000519607 LRRC7Q96NW7 1537 aa14.26□□□□□ -0.13
NUDCD1-203ENST00000519607 PPIP5K1Q6PFW1 1433 aa14.26□□□□□ -0.13
NUDCD1-203ENST00000519607 GNAI1P63096 354 aa14.26□□□□□ -0.13
NUDCD1-203ENST00000519607 NUCB1Q02818 461 aa14.26□□□□□ -0.13
NUDCD1-203ENST00000519607 NFE2L2Q16236 605 aa14.26□□□□□ -0.13
NUDCD1-203ENST00000519607 HSCBQ8IWL3 235 aa14.26□□□□□ -0.13
NUDCD1-203ENST00000519607 ARHGAP45Q92619 1136 aa14.26□□□□□ -0.13
NUDCD1-203ENST00000519607 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
NUDCD1-203ENST00000519607 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
NUDCD1-203ENST00000519607 CHMP5Q9NZZ3 219 aa14.25□□□□□ -0.13
NUDCD1-203ENST00000519607 LMOD3Q0VAK6 560 aa14.25□□□□□ -0.13
NUDCD1-203ENST00000519607 CHD1LQ86WJ1 897 aa14.24□□□□□ -0.13
NUDCD1-203ENST00000519607 GCC1Q96CN9 775 aa14.24□□□□□ -0.13
NUDCD1-203ENST00000519607 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
NUDCD1-203ENST00000519607 EDC4Q6P2E9 1401 aaKnown RBP14.22□□□□□ -0.13
NUDCD1-203ENST00000519607 LNPKQ9C0E8 428 aa14.22□□□□□ -0.13
NUDCD1-203ENST00000519607 EIF5BO60841 1220 aaKnown RBP14.21□□□□□ -0.13
NUDCD1-203ENST00000519607 VAMP4O75379 141 aa14.21□□□□□ -0.13
NUDCD1-203ENST00000519607 HMOX1P09601 288 aa14.21□□□□□ -0.13
NUDCD1-203ENST00000519607 WAPLQ7Z5K2 1190 aa14.21□□□□□ -0.13
NUDCD1-203ENST00000519607 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.13
NUDCD1-203ENST00000519607 ZBTB7BO15156 539 aaPredicted RBP14.21□□□□□ -0.14
NUDCD1-203ENST00000519607 RBM25P49756 843 aaKnown RBP14.21□□□□□ -0.14
NUDCD1-203ENST00000519607 BMP2KLQ5H9B9 411 aa14.21□□□□□ -0.14
NUDCD1-203ENST00000519607 RIMS2Q9UQ26 1411 aa14.21□□□□□ -0.14
NUDCD1-203ENST00000519607 MCM4P33991 863 aa14.2□□□□□ -0.14
NUDCD1-203ENST00000519607 MRPL50Q8N5N7 158 aaKnown RBP14.2□□□□□ -0.14
NUDCD1-203ENST00000519607 A2ML1A8K2U0 1454 aa14.2□□□□□ -0.14
NUDCD1-203ENST00000519607 CDK12Q9NYV4 1490 aaPredicted RBP14.2□□□□□ -0.14
NUDCD1-203ENST00000519607 WASLO00401 505 aaPredicted RBP14.2□□□□□ -0.14
NUDCD1-203ENST00000519607 ANKRD45Q5TZF3 282 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms