RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 RGS17Q9UGC6 210 aaPredicted RBP7.35□□□□□ -1.23
AP3B1-204ENST00000519295 MAFGO15525 162 aa7.35□□□□□ -1.23
AP3B1-204ENST00000519295 ANKLE2Q86XL3 938 aa7.35□□□□□ -1.23
AP3B1-204ENST00000519295 ZNF428Q96B54 188 aa7.35□□□□□ -1.23
AP3B1-204ENST00000519295 RGPD8O14715 1765 aaPredicted RBP7.35□□□□□ -1.23
AP3B1-204ENST00000519295 NAIPQ13075 1403 aa7.35□□□□□ -1.23
AP3B1-204ENST00000519295 PAPPAQ13219 1627 aa7.34□□□□□ -1.23
AP3B1-204ENST00000519295 MON2Q7Z3U7 1717 aa7.34□□□□□ -1.23
AP3B1-204ENST00000519295 KANK1Q14678 1352 aa7.34□□□□□ -1.23
AP3B1-204ENST00000519295 SLIT2O94813 1529 aa7.33□□□□□ -1.24
AP3B1-204ENST00000519295 BBXQ8WY36 941 aaPredicted RBP7.33□□□□□ -1.24
AP3B1-204ENST00000519295 JCADQ9P266 1359 aa7.33□□□□□ -1.24
AP3B1-204ENST00000519295 ANKARQ7Z5J8 1434 aa7.33□□□□□ -1.24
AP3B1-204ENST00000519295 ARID4BQ4LE39 1312 aaPredicted RBP7.32□□□□□ -1.24
AP3B1-204ENST00000519295 CFAP65Q6ZU64 1925 aaKnown RBP7.32□□□□□ -1.24
AP3B1-204ENST00000519295 BCL9LQ86UU0 1499 aa7.32□□□□□ -1.24
AP3B1-204ENST00000519295 IRF6O14896 467 aa7.32□□□□□ -1.24
AP3B1-204ENST00000519295 MYT1LQ9UL68 1186 aa7.32□□□□□ -1.24
AP3B1-204ENST00000519295 BCL9O00512 1426 aa7.31□□□□□ -1.24
AP3B1-204ENST00000519295 SLIT3O75094 1523 aa7.31□□□□□ -1.24
AP3B1-204ENST00000519295 LTKP29376 864 aa7.31□□□□□ -1.24
AP3B1-204ENST00000519295 CCDC9Q9Y3X0 531 aaKnown RBP7.31□□□□□ -1.24
AP3B1-204ENST00000519295 RPGRIP1LQ68CZ1 1315 aa7.31□□□□□ -1.24
AP3B1-204ENST00000519295 TOM1O60784 492 aa7.3□□□□□ -1.24
AP3B1-204ENST00000519295 CALD1Q05682 793 aaKnown RBP7.3□□□□□ -1.24
AP3B1-204ENST00000519295 RBM19Q9Y4C8 960 aaKnown RBP7.29□□□□□ -1.24
AP3B1-204ENST00000519295 SH3BP1Q9Y3L3 701 aa7.29□□□□□ -1.24
AP3B1-204ENST00000519295 CLSTN1O94985 981 aa7.29□□□□□ -1.24
AP3B1-204ENST00000519295 SHANK3Q9BYB0 1731 aa7.29□□□□□ -1.24
AP3B1-204ENST00000519295 C1orf167Q5SNV9 1468 aa7.28□□□□□ -1.24
AP3B1-204ENST00000519295 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.28□□□□□ -1.24
AP3B1-204ENST00000519295 IGSF5Q9NSI5 407 aa7.28□□□□□ -1.24
AP3B1-204ENST00000519295 TMEM94Q12767 1356 aa7.28□□□□□ -1.24
AP3B1-204ENST00000519295 TULP4Q9NRJ4 1543 aa7.27□□□□□ -1.25
AP3B1-204ENST00000519295 PNPLA6Q8IY17 1366 aa7.27□□□□□ -1.25
AP3B1-204ENST00000519295 ATP7BP35670 1465 aa7.27□□□□□ -1.25
AP3B1-204ENST00000519295 FBXO31Q5XUX0 539 aaPredicted RBP7.27□□□□□ -1.25
AP3B1-204ENST00000519295 PIK3C2AO00443 1686 aa7.26□□□□□ -1.25
AP3B1-204ENST00000519295 BRD4O60885 1362 aaPredicted RBP7.26□□□□□ -1.25
AP3B1-204ENST00000519295 MCCP23508 829 aa7.26□□□□□ -1.25
AP3B1-204ENST00000519295 KANK4Q5T7N3 995 aaPredicted RBP7.26□□□□□ -1.25
AP3B1-204ENST00000519295 RGS12O14924 1447 aa7.26□□□□□ -1.25
AP3B1-204ENST00000519295 NHSQ6T4R5 1651 aa7.26□□□□□ -1.25
AP3B1-204ENST00000519295 LRRC37A3O60309 1634 aa7.26□□□□□ -1.25
AP3B1-204ENST00000519295 SOS2Q07890 1332 aaPredicted RBP7.26□□□□□ -1.25
AP3B1-204ENST00000519295 NCLP19338 710 aaKnown RBP7.25□□□□□ -1.25
AP3B1-204ENST00000519295 HSPA1LP34931 641 aa7.25□□□□□ -1.25
AP3B1-204ENST00000519295 CARD10Q9BWT7 1032 aa7.25□□□□□ -1.25
AP3B1-204ENST00000519295 CWC22Q9HCG8 908 aaKnown RBP7.25□□□□□ -1.25
AP3B1-204ENST00000519295 CCDC144AA2RUR9 1427 aa7.25□□□□□ -1.25
AP3B1-204ENST00000519295 FAM177A1Q8N128 213 aaPredicted RBP7.25□□□□□ -1.25
AP3B1-204ENST00000519295 RPS6KL1Q9Y6S9 549 aa7.25□□□□□ -1.25
AP3B1-204ENST00000519295 ABCC11Q96J66 1382 aa7.25□□□□□ -1.25
AP3B1-204ENST00000519295 LY75O60449 1722 aa7.24□□□□□ -1.25
AP3B1-204ENST00000519295 CDCA8Q53HL2 280 aa7.24□□□□□ -1.25
AP3B1-204ENST00000519295 SBNO1A3KN83 1393 aa7.24□□□□□ -1.25
AP3B1-204ENST00000519295 DISP3Q9P2K9 1392 aa7.24□□□□□ -1.25
AP3B1-204ENST00000519295 KIF3BO15066 747 aa7.24□□□□□ -1.25
AP3B1-204ENST00000519295 RALGAPBQ86X10 1494 aa7.23□□□□□ -1.25
AP3B1-204ENST00000519295 LRPPRCP42704 1394 aaKnown RBP7.23□□□□□ -1.25
AP3B1-204ENST00000519295 MSH6P52701 1360 aa7.22□□□□□ -1.25
AP3B1-204ENST00000519295 TSPY4P0CV99 314 aa7.22□□□□□ -1.25
AP3B1-204ENST00000519295 TSPY10P0CW01 314 aa7.22□□□□□ -1.25
AP3B1-204ENST00000519295 NME8Q8N427 588 aa7.22□□□□□ -1.25
AP3B1-204ENST00000519295 IDI1Q13907 227 aa7.22□□□□□ -1.25
AP3B1-204ENST00000519295 MAMSTRQ6ZN01 415 aa7.22□□□□□ -1.25
AP3B1-204ENST00000519295 EGFL6Q8IUX8 553 aa7.22□□□□□ -1.25
AP3B1-204ENST00000519295 PCGF6Q9BYE7 350 aa7.21□□□□□ -1.25
AP3B1-204ENST00000519295 WWC1Q8IX03 1113 aa7.21□□□□□ -1.26
AP3B1-204ENST00000519295 KIF13BQ9NQT8 1826 aa7.21□□□□□ -1.26
AP3B1-204ENST00000519295 ONECUT3O60422 494 aaPredicted RBP7.21□□□□□ -1.26
AP3B1-204ENST00000519295 PLEKHG2Q9H7P9 1386 aa7.2□□□□□ -1.26
AP3B1-204ENST00000519295 HMGB1P09429 215 aaKnown RBP7.2□□□□□ -1.26
AP3B1-204ENST00000519295 MKL1Q969V6 931 aa7.2□□□□□ -1.26
AP3B1-204ENST00000519295 ANKRD30BQ9BXX2 1392 aa7.19□□□□□ -1.26
AP3B1-204ENST00000519295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.19□□□□□ -1.26
AP3B1-204ENST00000519295 HNRNPUL2Q1KMD3 747 aaKnown RBP7.19□□□□□ -1.26
AP3B1-204ENST00000519295 TMTC2Q8N394 836 aa7.19□□□□□ -1.26
AP3B1-204ENST00000519295 FNBP4Q8N3X1 1017 aaPredicted RBP7.19□□□□□ -1.26
AP3B1-204ENST00000519295 TUBGCP6Q96RT7 1819 aa7.19□□□□□ -1.26
AP3B1-204ENST00000519295 SSH2Q76I76 1423 aa7.19□□□□□ -1.26
AP3B1-204ENST00000519295 METP08581 1390 aa7.19□□□□□ -1.26
AP3B1-204ENST00000519295 DNAJC2Q99543 621 aaKnown RBP7.18□□□□□ -1.26
AP3B1-204ENST00000519295 CCDC96Q2M329 555 aa7.18□□□□□ -1.26
AP3B1-204ENST00000519295 AATKQ6ZMQ8 1374 aa7.18□□□□□ -1.26
AP3B1-204ENST00000519295 PKD1L3Q7Z443 1732 aa7.18□□□□□ -1.26
AP3B1-204ENST00000519295 KIAA1551Q9HCM1 1747 aa7.18□□□□□ -1.26
AP3B1-204ENST00000519295 RRP9O43818 475 aaKnown RBP7.18□□□□□ -1.26
AP3B1-204ENST00000519295 RGS3P49796 1198 aa7.18□□□□□ -1.26
AP3B1-204ENST00000519295 CCDC27Q2M243 656 aa7.17□□□□□ -1.26
AP3B1-204ENST00000519295 NUP155O75694 1391 aa7.17□□□□□ -1.26
AP3B1-204ENST00000519295 ESF1Q9H501 851 aaKnown RBP7.17□□□□□ -1.26
AP3B1-204ENST00000519295 MYCNP04198 464 aaPredicted RBP7.17□□□□□ -1.26
AP3B1-204ENST00000519295 HDGFP51858 240 aaKnown RBP7.17□□□□□ -1.26
AP3B1-204ENST00000519295 ARID3CA6NKF2 412 aa7.16□□□□□ -1.26
AP3B1-204ENST00000519295 UBAP1LF5GYI3 381 aa7.16□□□□□ -1.26
AP3B1-204ENST00000519295 POLR3AO14802 1390 aaPredicted RBP7.16□□□□□ -1.26
AP3B1-204ENST00000519295 ADAMTS7Q9UKP4 1686 aa7.16□□□□□ -1.26
AP3B1-204ENST00000519295 NFAT5O94916 1531 aa7.15□□□□□ -1.26
AP3B1-204ENST00000519295 C19orf44Q9H6X5 657 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms