RNA–Protein interactions for RNA: ENST00000519106.1

CLDN23-201, Transcript of claudin 23, humanhuman

APPRIS P1 BASIC

Gene CLDN23, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23-201ENST00000519106 HNRNPUQ00839 825 aaKnown RBP eCLIP28.05■■■□□ 2.08
CLDN23-201ENST00000519106 ANKRD26Q9UPS8 1709 aa28.05■■■□□ 2.08
CLDN23-201ENST00000519106 ZRANB1Q9UGI0 708 aa28.04■■■□□ 2.08
CLDN23-201ENST00000519106 PHF8Q9UPP1 1060 aa28.04■■■□□ 2.08
CLDN23-201ENST00000519106 TTC21BQ7Z4L5 1316 aa28.04■■■□□ 2.08
CLDN23-201ENST00000519106 NCOA3Q9Y6Q9 1424 aa28.03■■■□□ 2.08
CLDN23-201ENST00000519106 ATF3P18847 181 aa28.03■■■□□ 2.08
CLDN23-201ENST00000519106 MTHFSP49914 203 aa28.01■■■□□ 2.08
CLDN23-201ENST00000519106 ORAI2Q96SN7 254 aa28.01■■■□□ 2.07
CLDN23-201ENST00000519106 NRKQ7Z2Y5 1582 aa28.01■■■□□ 2.07
CLDN23-201ENST00000519106 SSH2Q76I76 1423 aa27.99■■■□□ 2.07
CLDN23-201ENST00000519106 COG3Q96JB2 828 aa27.99■■■□□ 2.07
CLDN23-201ENST00000519106 LRRC7Q96NW7 1537 aa27.98■■■□□ 2.07
CLDN23-201ENST00000519106 FBLN1P23142 703 aa27.97■■■□□ 2.07
CLDN23-201ENST00000519106 XIRP1Q702N8 1843 aaKnown RBP27.97■■■□□ 2.07
CLDN23-201ENST00000519106 MSH6P52701 1360 aa27.97■■■□□ 2.07
CLDN23-201ENST00000519106 C1orf167Q5SNV9 1468 aa27.95■■■□□ 2.06
CLDN23-201ENST00000519106 DCCP43146 1447 aa27.95■■■□□ 2.06
CLDN23-201ENST00000519106 CADPS2Q86UW7 1296 aa27.95■■■□□ 2.06
CLDN23-201ENST00000519106 TTC21AQ8NDW8 1320 aa27.94■■■□□ 2.06
CLDN23-201ENST00000519106 WDR43Q15061 677 aaKnown RBP eCLIP27.94■■■□□ 2.06
CLDN23-201ENST00000519106 PSME1Q06323 249 aa27.93■■■□□ 2.06
CLDN23-201ENST00000519106 ADAMTS8Q9UP79 889 aa27.93■■■□□ 2.06
CLDN23-201ENST00000519106 PAK3O75914 559 aaPredicted RBP27.93■■■□□ 2.06
CLDN23-201ENST00000519106 FOXO3O43524 673 aa27.92■■■□□ 2.06
CLDN23-201ENST00000519106 MST1RQ04912 1400 aa27.92■■■□□ 2.06
CLDN23-201ENST00000519106 SENP3-EIF4A1A0A087X0R7 540 aa27.92■■■□□ 2.06
CLDN23-201ENST00000519106 CFAP53Q96M91 514 aa27.91■■■□□ 2.06
CLDN23-201ENST00000519106 PPM1GO15355 546 aaPredicted RBP27.88■■■□□ 2.05
CLDN23-201ENST00000519106 POLKQ9UBT6 870 aa27.88■■■□□ 2.05
CLDN23-201ENST00000519106 XPCQ01831 940 aaPredicted RBP27.87■■■□□ 2.05
CLDN23-201ENST00000519106 OVOS2A0A0J9YW53 1432 aa27.87■■■□□ 2.05
CLDN23-201ENST00000519106 OVOS2Q6IE36 1432 aa27.87■■■□□ 2.05
CLDN23-201ENST00000519106 MAP2P11137 1827 aaKnown RBP27.87■■■□□ 2.05
CLDN23-201ENST00000519106 ABTB2Q8N961 1025 aa27.87■■■□□ 2.05
CLDN23-201ENST00000519106 NUTM2GQ5VZR2 741 aa27.86■■■□□ 2.05
CLDN23-201ENST00000519106 SUPT16HQ9Y5B9 1047 aaKnown RBP27.86■■■□□ 2.05
CLDN23-201ENST00000519106 PIK3C2AO00443 1686 aa27.85■■■□□ 2.05
CLDN23-201ENST00000519106 NLRP6P59044 892 aa27.85■■■□□ 2.05
CLDN23-201ENST00000519106 RRS1Q15050 365 aaKnown RBP27.84■■■□□ 2.05
CLDN23-201ENST00000519106 SOX12O15370 315 aa27.84■■■□□ 2.05
CLDN23-201ENST00000519106 ANP32EQ9BTT0 268 aa27.84■■■□□ 2.05
CLDN23-201ENST00000519106 EMILIN1Q9Y6C2 1016 aa27.84■■■□□ 2.05
CLDN23-201ENST00000519106 AATKQ6ZMQ8 1374 aa27.84■■■□□ 2.05
CLDN23-201ENST00000519106 KIF1AQ12756 1690 aa27.82■■■□□ 2.04
CLDN23-201ENST00000519106 USP31Q70CQ4 1352 aa27.81■■■□□ 2.04
CLDN23-201ENST00000519106 ZBED9Q6R2W3 1325 aa27.81■■■□□ 2.04
CLDN23-201ENST00000519106 SHPRHQ149N8 1683 aa27.81■■■□□ 2.04
CLDN23-201ENST00000519106 BLMP54132 1417 aaPredicted RBP27.8■■■□□ 2.04
CLDN23-201ENST00000519106 INSRP06213 1382 aa27.8■■■□□ 2.04
CLDN23-201ENST00000519106 KRT28Q7Z3Y7 464 aa27.8■■■□□ 2.04
CLDN23-201ENST00000519106 DDX17Q92841 729 aaKnown RBP27.79■■■□□ 2.04
CLDN23-201ENST00000519106 SLAIN2Q9P270 581 aa27.79■■■□□ 2.04
CLDN23-201ENST00000519106 PNPLA6Q8IY17 1366 aa27.78■■■□□ 2.04
CLDN23-201ENST00000519106 SALL2Q9Y467 1007 aaPredicted RBP27.77■■■□□ 2.04
CLDN23-201ENST00000519106 CCDC146Q8IYE0 955 aa27.77■■■□□ 2.04
CLDN23-201ENST00000519106 COL3A1P02461 1466 aaPredicted RBP27.77■■■□□ 2.04
CLDN23-201ENST00000519106 DIAPH1O60610 1272 aaKnown RBP27.75■■■□□ 2.03
CLDN23-201ENST00000519106 LMOD2Q6P5Q4 547 aa27.75■■■□□ 2.03
CLDN23-201ENST00000519106 AEBP2Q6ZN18 517 aaPredicted RBP27.75■■■□□ 2.03
CLDN23-201ENST00000519106 NUDCQ9Y266 331 aa27.75■■■□□ 2.03
CLDN23-201ENST00000519106 SMG6Q86US8 1419 aaKnown RBP27.74■■■□□ 2.03
CLDN23-201ENST00000519106 U2SURPO15042 1029 aaKnown RBP27.74■■■□□ 2.03
CLDN23-201ENST00000519106 U2AF1L5P0DN76 240 aaPredicted RBP27.74■■■□□ 2.03
CLDN23-201ENST00000519106 U2AF1Q01081 240 aaKnown RBP eCLIP27.74■■■□□ 2.03
CLDN23-201ENST00000519106 BRINP3Q76B58 766 aa27.74■■■□□ 2.03
CLDN23-201ENST00000519106 MARF1Q9Y4F3 1742 aaKnown RBP27.73■■■□□ 2.03
CLDN23-201ENST00000519106 TSHZ2Q9NRE2 1034 aa27.73■■■□□ 2.03
CLDN23-201ENST00000519106 NPHP3Q7Z494 1330 aa27.72■■■□□ 2.03
CLDN23-201ENST00000519106 CDK12Q9NYV4 1490 aaPredicted RBP27.71■■■□□ 2.03
CLDN23-201ENST00000519106 TRPM3Q9HCF6 1732 aaPredicted RBP27.7■■■□□ 2.03
CLDN23-201ENST00000519106 PLEKHG5O94827 1062 aa27.7■■■□□ 2.02
CLDN23-201ENST00000519106 MAP3K19Q56UN5 1328 aa27.7■■■□□ 2.02
CLDN23-201ENST00000519106 LTBP4Q8N2S1 1624 aa27.69■■■□□ 2.02
CLDN23-201ENST00000519106 USP54Q70EL1 1684 aa27.69■■■□□ 2.02
CLDN23-201ENST00000519106 APAF1O14727 1248 aa27.66■■■□□ 2.02
CLDN23-201ENST00000519106 IL13P35225 146 aa27.65■■■□□ 2.02
CLDN23-201ENST00000519106 HSP90AB2PQ58FF8 381 aa27.65■■■□□ 2.02
CLDN23-201ENST00000519106 PEAK1Q9H792 1746 aa27.65■■■□□ 2.02
CLDN23-201ENST00000519106 AMPHP49418 695 aa27.65■■■□□ 2.02
CLDN23-201ENST00000519106 BCL11AQ9H165 835 aa27.64■■■□□ 2.02
CLDN23-201ENST00000519106 RUNDC1Q96C34 613 aa27.63■■■□□ 2.01
CLDN23-201ENST00000519106 PXDNQ92626 1479 aa27.62■■■□□ 2.01
CLDN23-201ENST00000519106 SBNO1A3KN83 1393 aa27.62■■■□□ 2.01
CLDN23-201ENST00000519106 KCNH5Q8NCM2 988 aa27.62■■■□□ 2.01
CLDN23-201ENST00000519106 ALS2Q96Q42 1657 aa27.61■■■□□ 2.01
CLDN23-201ENST00000519106 FLT4P35916 1363 aa27.6■■■□□ 2.01
CLDN23-201ENST00000519106 GCP02774 474 aa27.6■■■□□ 2.01
CLDN23-201ENST00000519106 EIF4A2Q14240 407 aaKnown RBP27.6■■■□□ 2.01
CLDN23-201ENST00000519106 NFAT5O94916 1531 aa27.58■■■□□ 2.01
CLDN23-201ENST00000519106 HMOX1P09601 288 aa27.58■■■□□ 2
CLDN23-201ENST00000519106 TCP11L2Q8N4U5 519 aa27.58■■■□□ 2
CLDN23-201ENST00000519106 TNS3Q68CZ2 1445 aa27.57■■■□□ 2
CLDN23-201ENST00000519106 SPATA31A3Q5VYP0 1347 aa27.57■■■□□ 2
CLDN23-201ENST00000519106 ZBTB7CA1YPR0 619 aa27.57■■■□□ 2
CLDN23-201ENST00000519106 USP19O94966 1318 aa27.57■■■□□ 2
CLDN23-201ENST00000519106 PLEKHF1Q96S99 279 aa27.56■■■□□ 2
CLDN23-201ENST00000519106 HOXC9P31274 260 aa27.56■■■□□ 2
CLDN23-201ENST00000519106 NEUROD2Q15784 382 aa27.56■■■□□ 2
CLDN23-201ENST00000519106 FCHSD2O94868 740 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms