RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 ZNF316A6NFI3 1004 aaPredicted RBP29.03■■■□□ 2.24
TOP1MT-206ENST00000518951 ILDR1Q86SU0 546 aaPredicted RBP29.03■■■□□ 2.24
TOP1MT-206ENST00000518951 CARD14Q9BXL6 1004 aa29.03■■■□□ 2.24
TOP1MT-206ENST00000518951 PANK3Q9H999 370 aa29.03■■■□□ 2.24
TOP1MT-206ENST00000518951 SPATA31A3Q5VYP0 1347 aa29.02■■■□□ 2.24
TOP1MT-206ENST00000518951 PAK3O75914 559 aaPredicted RBP29.02■■■□□ 2.24
TOP1MT-206ENST00000518951 LRRC59Q96AG4 307 aaKnown RBP29.02■■■□□ 2.24
TOP1MT-206ENST00000518951 TTC21BQ7Z4L5 1316 aa29■■■□□ 2.23
TOP1MT-206ENST00000518951 TNS3Q68CZ2 1445 aa29■■■□□ 2.23
TOP1MT-206ENST00000518951 EDC4Q6P2E9 1401 aaKnown RBP28.99■■■□□ 2.23
TOP1MT-206ENST00000518951 BRD4O60885 1362 aaPredicted RBP28.98■■■□□ 2.23
TOP1MT-206ENST00000518951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.97■■■□□ 2.23
TOP1MT-206ENST00000518951 PIK3C2AO00443 1686 aa28.96■■■□□ 2.23
TOP1MT-206ENST00000518951 LMOD2Q6P5Q4 547 aa28.96■■■□□ 2.23
TOP1MT-206ENST00000518951 PNPLA6Q8IY17 1366 aa28.95■■■□□ 2.23
TOP1MT-206ENST00000518951 SHPRHQ149N8 1683 aa28.95■■■□□ 2.23
TOP1MT-206ENST00000518951 NSD3Q9BZ95 1437 aa28.95■■■□□ 2.22
TOP1MT-206ENST00000518951 NUTM2GQ5VZR2 741 aa28.93■■■□□ 2.22
TOP1MT-206ENST00000518951 ABTB2Q8N961 1025 aa28.93■■■□□ 2.22
TOP1MT-206ENST00000518951 JCADQ9P266 1359 aa28.93■■■□□ 2.22
TOP1MT-206ENST00000518951 TTC21AQ8NDW8 1320 aa28.92■■■□□ 2.22
TOP1MT-206ENST00000518951 COL22A1Q8NFW1 1626 aaPredicted RBP28.92■■■□□ 2.22
TOP1MT-206ENST00000518951 MARF1Q9Y4F3 1742 aaKnown RBP28.92■■■□□ 2.22
TOP1MT-206ENST00000518951 NME9Q86XW9 330 aa28.91■■■□□ 2.22
TOP1MT-206ENST00000518951 ZRANB1Q9UGI0 708 aa28.91■■■□□ 2.22
TOP1MT-206ENST00000518951 ARHGEF10O15013 1369 aa28.9■■■□□ 2.22
TOP1MT-206ENST00000518951 PER1O15534 1290 aaPredicted RBP28.9■■■□□ 2.22
TOP1MT-206ENST00000518951 KIF20BQ96Q89 1820 aa28.89■■■□□ 2.22
TOP1MT-206ENST00000518951 DDX10Q13206 875 aaKnown RBP28.89■■■□□ 2.22
TOP1MT-206ENST00000518951 CRYBG1Q9Y4K1 1723 aa28.89■■■□□ 2.21
TOP1MT-206ENST00000518951 PLEKHG5O94827 1062 aa28.88■■■□□ 2.21
TOP1MT-206ENST00000518951 MED1Q15648 1581 aaPredicted RBP28.87■■■□□ 2.21
TOP1MT-206ENST00000518951 CABLES1Q8TDN4 633 aa28.87■■■□□ 2.21
TOP1MT-206ENST00000518951 FYB1O15117 783 aa28.86■■■□□ 2.21
TOP1MT-206ENST00000518951 ABCA3Q99758 1704 aa28.86■■■□□ 2.21
TOP1MT-206ENST00000518951 NLRP6P59044 892 aa28.85■■■□□ 2.21
TOP1MT-206ENST00000518951 USP54Q70EL1 1684 aa28.85■■■□□ 2.21
TOP1MT-206ENST00000518951 USP31Q70CQ4 1352 aa28.83■■■□□ 2.21
TOP1MT-206ENST00000518951 NLRP13Q86W25 1043 aa28.83■■■□□ 2.21
TOP1MT-206ENST00000518951 GGNBP2Q9H3C7 697 aa28.83■■■□□ 2.21
TOP1MT-206ENST00000518951 PHRF1Q9P1Y6 1649 aaKnown RBP28.82■■■□□ 2.2
TOP1MT-206ENST00000518951 KNSTRNQ9Y448 316 aa28.82■■■□□ 2.2
TOP1MT-206ENST00000518951 USP19O94966 1318 aa28.8■■■□□ 2.2
TOP1MT-206ENST00000518951 CGNL1Q0VF96 1302 aa28.8■■■□□ 2.2
TOP1MT-206ENST00000518951 OVOS2A0A0J9YW53 1432 aa28.8■■■□□ 2.2
TOP1MT-206ENST00000518951 OVOS2Q6IE36 1432 aa28.8■■■□□ 2.2
TOP1MT-206ENST00000518951 AMER1Q5JTC6 1135 aaPredicted RBP28.79■■■□□ 2.2
TOP1MT-206ENST00000518951 NUTM2BA6NNL0 878 aaPredicted RBP28.78■■■□□ 2.2
TOP1MT-206ENST00000518951 NUTM2EB1AL46 878 aaPredicted RBP28.78■■■□□ 2.2
TOP1MT-206ENST00000518951 NUTM2AQ8IVF1 878 aaPredicted RBP28.78■■■□□ 2.2
TOP1MT-206ENST00000518951 ANKRD26Q9UPS8 1709 aa28.78■■■□□ 2.2
TOP1MT-206ENST00000518951 SPATA31A6Q5VVP1 1343 aa28.78■■■□□ 2.2
TOP1MT-206ENST00000518951 SLIT3O75094 1523 aa28.78■■■□□ 2.2
TOP1MT-206ENST00000518951 LRP6O75581 1613 aa28.78■■■□□ 2.2
TOP1MT-206ENST00000518951 COG3Q96JB2 828 aa28.75■■■□□ 2.19
TOP1MT-206ENST00000518951 GCP02774 474 aa28.74■■■□□ 2.19
TOP1MT-206ENST00000518951 SOX12O15370 315 aa28.72■■■□□ 2.19
TOP1MT-206ENST00000518951 FBLN1P23142 703 aa28.71■■■□□ 2.19
TOP1MT-206ENST00000518951 HAP1P54257 671 aaPredicted RBP28.71■■■□□ 2.19
TOP1MT-206ENST00000518951 NFAT5O94916 1531 aa28.71■■■□□ 2.19
TOP1MT-206ENST00000518951 NSD2O96028 1365 aa28.7■■■□□ 2.19
TOP1MT-206ENST00000518951 ADAMTS2O95450 1211 aa28.7■■■□□ 2.18
TOP1MT-206ENST00000518951 CNGB1Q14028 1251 aaPredicted RBP28.7■■■□□ 2.18
TOP1MT-206ENST00000518951 CC2D1BQ5T0F9 858 aaKnown RBP28.7■■■□□ 2.18
TOP1MT-206ENST00000518951 ZC3H6P61129 1189 aaKnown RBP28.69■■■□□ 2.18
TOP1MT-206ENST00000518951 NPC1L1Q9UHC9 1359 aa28.69■■■□□ 2.18
TOP1MT-206ENST00000518951 KCNH5Q8NCM2 988 aa28.66■■■□□ 2.18
TOP1MT-206ENST00000518951 LTN1O94822 1766 aa28.65■■■□□ 2.18
TOP1MT-206ENST00000518951 KIAA0232Q92628 1395 aa28.65■■■□□ 2.18
TOP1MT-206ENST00000518951 MORC1Q86VD1 984 aa28.64■■■□□ 2.17
TOP1MT-206ENST00000518951 MAP2P11137 1827 aaKnown RBP28.64■■■□□ 2.17
TOP1MT-206ENST00000518951 TNNT2P45379 298 aaPredicted RBP28.63■■■□□ 2.17
TOP1MT-206ENST00000518951 FAM83GA6ND36 823 aa28.62■■■□□ 2.17
TOP1MT-206ENST00000518951 ARHGEF25Q86VW2 580 aa28.62■■■□□ 2.17
TOP1MT-206ENST00000518951 CPDO75976 1380 aa28.62■■■□□ 2.17
TOP1MT-206ENST00000518951 CHRNA2Q15822 529 aa28.61■■■□□ 2.17
TOP1MT-206ENST00000518951 COL18A1P39060 1754 aa28.61■■■□□ 2.17
TOP1MT-206ENST00000518951 ZBTB7CA1YPR0 619 aa28.59■■■□□ 2.17
TOP1MT-206ENST00000518951 MEX3CQ5U5Q3 659 aaKnown RBP28.59■■■□□ 2.17
TOP1MT-206ENST00000518951 COL14A1Q05707 1796 aaKnown RBP28.59■■■□□ 2.17
TOP1MT-206ENST00000518951 RRS1Q15050 365 aaKnown RBP28.59■■■□□ 2.17
TOP1MT-206ENST00000518951 C8orf37Q96NL8 207 aa28.59■■■□□ 2.17
TOP1MT-206ENST00000518951 PRDM11Q9NQV5 511 aa28.59■■■□□ 2.17
TOP1MT-206ENST00000518951 RGPD5Q99666 1765 aa28.58■■■□□ 2.17
TOP1MT-206ENST00000518951 PLCH1Q4KWH8 1693 aa28.57■■■□□ 2.16
TOP1MT-206ENST00000518951 AATKQ6ZMQ8 1374 aa28.57■■■□□ 2.16
TOP1MT-206ENST00000518951 MAP3K19Q56UN5 1328 aa28.56■■■□□ 2.16
TOP1MT-206ENST00000518951 LMO7Q8WWI1 1683 aa28.56■■■□□ 2.16
TOP1MT-206ENST00000518951 PEAK1Q9H792 1746 aa28.55■■■□□ 2.16
TOP1MT-206ENST00000518951 NGLY1Q96IV0 654 aa28.54■■■□□ 2.16
TOP1MT-206ENST00000518951 EMILIN1Q9Y6C2 1016 aa28.54■■■□□ 2.16
TOP1MT-206ENST00000518951 POLKQ9UBT6 870 aa28.53■■■□□ 2.16
TOP1MT-206ENST00000518951 CAMTA1Q9Y6Y1 1673 aa28.53■■■□□ 2.16
TOP1MT-206ENST00000518951 AXIN2Q9Y2T1 843 aa28.53■■■□□ 2.16
TOP1MT-206ENST00000518951 SLIT2O94813 1529 aa28.53■■■□□ 2.16
TOP1MT-206ENST00000518951 PARD3Q8TEW0 1356 aa28.52■■■□□ 2.16
TOP1MT-206ENST00000518951 NWD2Q9ULI1 1742 aa28.51■■■□□ 2.15
TOP1MT-206ENST00000518951 FNBP4Q8N3X1 1017 aaPredicted RBP28.5■■■□□ 2.15
TOP1MT-206ENST00000518951 BTG4Q9NY30 223 aa28.5■■■□□ 2.15
TOP1MT-206ENST00000518951 AFF2P51816 1311 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms