RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 COL22A1Q8NFW1 1626 aaPredicted RBP17.12■□□□□ 0.33
CTNNA1-211ENST00000518910 PLEKHG3A1L390 1219 aa17.1■□□□□ 0.33
CTNNA1-211ENST00000518910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.1■□□□□ 0.331e-6■■□□□ 12.4
CTNNA1-211ENST00000518910 ZBTB7CA1YPR0 619 aa17.09■□□□□ 0.33
CTNNA1-211ENST00000518910 SOX12O15370 315 aa17.09■□□□□ 0.33
CTNNA1-211ENST00000518910 C8orf37Q96NL8 207 aa17.09■□□□□ 0.33
CTNNA1-211ENST00000518910 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
CTNNA1-211ENST00000518910 KTN1Q86UP2 1357 aaKnown RBP17.09■□□□□ 0.33
CTNNA1-211ENST00000518910 NRKQ7Z2Y5 1582 aa17.09■□□□□ 0.33
CTNNA1-211ENST00000518910 PHRF1Q9P1Y6 1649 aaKnown RBP17.09■□□□□ 0.33
CTNNA1-211ENST00000518910 PIK3C2AO00443 1686 aa17.09■□□□□ 0.33
CTNNA1-211ENST00000518910 CRYBG1Q9Y4K1 1723 aa17.08■□□□□ 0.32
CTNNA1-211ENST00000518910 USP6P35125 1406 aa17.08■□□□□ 0.32
CTNNA1-211ENST00000518910 SBNO1A3KN83 1393 aa17.07■□□□□ 0.32
CTNNA1-211ENST00000518910 SPATA31A6Q5VVP1 1343 aa17.07■□□□□ 0.32
CTNNA1-211ENST00000518910 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
CTNNA1-211ENST00000518910 A0A1W2PP64 1363 aa17.06■□□□□ 0.32
CTNNA1-211ENST00000518910 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
CTNNA1-211ENST00000518910 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
CTNNA1-211ENST00000518910 ZRANB1Q9UGI0 708 aa17.06■□□□□ 0.32
CTNNA1-211ENST00000518910 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
CTNNA1-211ENST00000518910 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
CTNNA1-211ENST00000518910 ARHGEF10O15013 1369 aa17.05■□□□□ 0.32
CTNNA1-211ENST00000518910 PLCH1Q4KWH8 1693 aa17.04■□□□□ 0.32
CTNNA1-211ENST00000518910 TTC21BQ7Z4L5 1316 aa17.02■□□□□ 0.32
CTNNA1-211ENST00000518910 NLRP6P59044 892 aa17.02■□□□□ 0.32
CTNNA1-211ENST00000518910 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.32
CTNNA1-211ENST00000518910 CDCA8Q53HL2 280 aa17.02■□□□□ 0.32
CTNNA1-211ENST00000518910 NME9Q86XW9 330 aa17.02■□□□□ 0.32
CTNNA1-211ENST00000518910 NGLY1Q96IV0 654 aa17.02■□□□□ 0.32
CTNNA1-211ENST00000518910 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.32
CTNNA1-211ENST00000518910 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.31
CTNNA1-211ENST00000518910 RGPD5Q99666 1765 aa17.02■□□□□ 0.31
CTNNA1-211ENST00000518910 AFF2P51816 1311 aa17.01■□□□□ 0.31
CTNNA1-211ENST00000518910 ZC3H6P61129 1189 aaKnown RBP17.01■□□□□ 0.31
CTNNA1-211ENST00000518910 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
CTNNA1-211ENST00000518910 LTN1O94822 1766 aa16.99■□□□□ 0.31
CTNNA1-211ENST00000518910 SLC24A1O60721 1099 aa16.98■□□□□ 0.31
CTNNA1-211ENST00000518910 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
CTNNA1-211ENST00000518910 KIF7Q2M1P5 1343 aa16.97■□□□□ 0.31
CTNNA1-211ENST00000518910 RGS17Q9UGC6 210 aaPredicted RBP16.97■□□□□ 0.31
CTNNA1-211ENST00000518910 ANKRD36BQ8N2N9 1353 aa16.97■□□□□ 0.31
CTNNA1-211ENST00000518910 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.31
CTNNA1-211ENST00000518910 SSH2Q76I76 1423 aa16.96■□□□□ 0.31
CTNNA1-211ENST00000518910 NSD3Q9BZ95 1437 aa16.96■□□□□ 0.31
CTNNA1-211ENST00000518910 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
CTNNA1-211ENST00000518910 KIAA0232Q92628 1395 aa16.95■□□□□ 0.3
CTNNA1-211ENST00000518910 NINLQ9Y2I6 1382 aa16.95■□□□□ 0.3
CTNNA1-211ENST00000518910 POTEAQ6S8J7 498 aa16.95■□□□□ 0.3
CTNNA1-211ENST00000518910 PUS7Q96PZ0 661 aaKnown RBP16.95■□□□□ 0.3
CTNNA1-211ENST00000518910 GGNBP2Q9H3C7 697 aa16.95■□□□□ 0.3
CTNNA1-211ENST00000518910 PRDM11Q9NQV5 511 aa16.95■□□□□ 0.3
CTNNA1-211ENST00000518910 COL14A1Q05707 1796 aaKnown RBP16.94■□□□□ 0.3
CTNNA1-211ENST00000518910 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
CTNNA1-211ENST00000518910 TTC21AQ8NDW8 1320 aa16.94■□□□□ 0.3
CTNNA1-211ENST00000518910 FAM83GA6ND36 823 aa16.93■□□□□ 0.3
CTNNA1-211ENST00000518910 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
CTNNA1-211ENST00000518910 PANK3Q9H999 370 aa16.93■□□□□ 0.3
CTNNA1-211ENST00000518910 USP21Q9UK80 565 aa16.93■□□□□ 0.3
CTNNA1-211ENST00000518910 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
CTNNA1-211ENST00000518910 CCDC7Q96M83 1385 aa16.92■□□□□ 0.3
CTNNA1-211ENST00000518910 FBLN1P23142 703 aa16.92■□□□□ 0.3
CTNNA1-211ENST00000518910 ZEB1P37275 1124 aaPredicted RBP16.92■□□□□ 0.3
CTNNA1-211ENST00000518910 ILDR2Q71H61 639 aa16.92■□□□□ 0.3
CTNNA1-211ENST00000518910 NWD2Q9ULI1 1742 aa16.92■□□□□ 0.3
CTNNA1-211ENST00000518910 WASHC2AQ641Q2 1341 aa16.92■□□□□ 0.3
CTNNA1-211ENST00000518910 GCP02774 474 aa16.91■□□□□ 0.3
CTNNA1-211ENST00000518910 STRN4Q9NRL3 753 aa16.91■□□□□ 0.3
CTNNA1-211ENST00000518910 USP19O94966 1318 aa16.91■□□□□ 0.3
CTNNA1-211ENST00000518910 SLIT3O75094 1523 aa16.91■□□□□ 0.3
CTNNA1-211ENST00000518910 ANKRD26Q9UPS8 1709 aa16.9■□□□□ 0.3
CTNNA1-211ENST00000518910 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
CTNNA1-211ENST00000518910 MAP2P11137 1827 aaKnown RBP16.9■□□□□ 0.3
CTNNA1-211ENST00000518910 USP54Q70EL1 1684 aa16.9■□□□□ 0.3
CTNNA1-211ENST00000518910 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.3
CTNNA1-211ENST00000518910 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
CTNNA1-211ENST00000518910 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.89■□□□□ 0.29
CTNNA1-211ENST00000518910 NFAT5O94916 1531 aa16.88■□□□□ 0.29
CTNNA1-211ENST00000518910 ZNF772Q68DY9 489 aaPredicted RBP16.88■□□□□ 0.29
CTNNA1-211ENST00000518910 COG3Q96JB2 828 aa16.88■□□□□ 0.29
CTNNA1-211ENST00000518910 QTRT2Q9H974 415 aaKnown RBP16.88■□□□□ 0.29
CTNNA1-211ENST00000518910 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
CTNNA1-211ENST00000518910 COL18A1P39060 1754 aa16.87■□□□□ 0.29
CTNNA1-211ENST00000518910 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
CTNNA1-211ENST00000518910 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
CTNNA1-211ENST00000518910 FYB1O15117 783 aa16.86■□□□□ 0.29
CTNNA1-211ENST00000518910 USP35Q9P2H5 1018 aa16.86■□□□□ 0.29
CTNNA1-211ENST00000518910 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
CTNNA1-211ENST00000518910 SLIT2O94813 1529 aa16.86■□□□□ 0.29
CTNNA1-211ENST00000518910 LMO7Q8WWI1 1683 aa16.85■□□□□ 0.29
CTNNA1-211ENST00000518910 CAMTA1Q9Y6Y1 1673 aa16.85■□□□□ 0.29
CTNNA1-211ENST00000518910 A0A0G2JS52 829 aa16.85■□□□□ 0.29
CTNNA1-211ENST00000518910 EVA1CP58658 441 aa16.85■□□□□ 0.29
CTNNA1-211ENST00000518910 MYT1Q01538 1121 aa16.85■□□□□ 0.29
CTNNA1-211ENST00000518910 BRWD3Q6RI45 1802 aa16.84■□□□□ 0.29
CTNNA1-211ENST00000518910 RRS1Q15050 365 aaKnown RBP16.84■□□□□ 0.29
CTNNA1-211ENST00000518910 UNC5CLQ8IV45 518 aa16.84■□□□□ 0.29
CTNNA1-211ENST00000518910 LTV1Q96GA3 475 aaPredicted RBP16.84■□□□□ 0.29
CTNNA1-211ENST00000518910 CGNL1Q0VF96 1302 aa16.83■□□□□ 0.28
CTNNA1-211ENST00000518910 USP31Q70CQ4 1352 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms