RNA–Protein interactions for RNA: ENST00000518720.5

TSNARE1-202, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-202ENST00000518720 SOS2Q07890 1332 aaPredicted RBP23.66■■□□□ 1.38
TSNARE1-202ENST00000518720 PAK3O75914 559 aaPredicted RBP23.66■■□□□ 1.38
TSNARE1-202ENST00000518720 TNS3Q68CZ2 1445 aa23.66■■□□□ 1.38
TSNARE1-202ENST00000518720 NSD3Q9BZ95 1437 aa23.66■■□□□ 1.38
TSNARE1-202ENST00000518720 HSPA1LP34931 641 aa23.65■■□□□ 1.38
TSNARE1-202ENST00000518720 ZNF692Q9BU19 519 aaPredicted RBP23.65■■□□□ 1.38
TSNARE1-202ENST00000518720 EDC4Q6P2E9 1401 aaKnown RBP23.65■■□□□ 1.38
TSNARE1-202ENST00000518720 PIK3C2AO00443 1686 aa23.64■■□□□ 1.38
TSNARE1-202ENST00000518720 PANK3Q9H999 370 aa23.64■■□□□ 1.37
TSNARE1-202ENST00000518720 SBNO1A3KN83 1393 aa23.64■■□□□ 1.37
TSNARE1-202ENST00000518720 LMOD2Q6P5Q4 547 aa23.63■■□□□ 1.37
TSNARE1-202ENST00000518720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.62■■□□□ 1.372e-6■■■□□ 16.2
TSNARE1-202ENST00000518720 SSH2Q76I76 1423 aa23.61■■□□□ 1.37
TSNARE1-202ENST00000518720 BRD4O60885 1362 aaPredicted RBP23.61■■□□□ 1.37
TSNARE1-202ENST00000518720 SHPRHQ149N8 1683 aa23.6■■□□□ 1.37
TSNARE1-202ENST00000518720 TTC21BQ7Z4L5 1316 aa23.6■■□□□ 1.37
TSNARE1-202ENST00000518720 SPATA31A3Q5VYP0 1347 aa23.59■■□□□ 1.37
TSNARE1-202ENST00000518720 CARD14Q9BXL6 1004 aa23.59■■□□□ 1.37
TSNARE1-202ENST00000518720 PLEKHG5O94827 1062 aa23.58■■□□□ 1.37
TSNARE1-202ENST00000518720 DDX10Q13206 875 aaKnown RBP23.58■■□□□ 1.37
TSNARE1-202ENST00000518720 LRRC59Q96AG4 307 aaKnown RBP23.58■■□□□ 1.37
TSNARE1-202ENST00000518720 ABCA3Q99758 1704 aa23.58■■□□□ 1.37
TSNARE1-202ENST00000518720 MARF1Q9Y4F3 1742 aaKnown RBP23.58■■□□□ 1.37
TSNARE1-202ENST00000518720 TTC21AQ8NDW8 1320 aa23.58■■□□□ 1.36
TSNARE1-202ENST00000518720 ARHGEF10O15013 1369 aa23.57■■□□□ 1.36
TSNARE1-202ENST00000518720 ANKRD26Q9UPS8 1709 aa23.56■■□□□ 1.36
TSNARE1-202ENST00000518720 PNPLA6Q8IY17 1366 aa23.56■■□□□ 1.36
TSNARE1-202ENST00000518720 COL22A1Q8NFW1 1626 aaPredicted RBP23.56■■□□□ 1.36
TSNARE1-202ENST00000518720 NUTM2GQ5VZR2 741 aa23.56■■□□□ 1.36
TSNARE1-202ENST00000518720 USP54Q70EL1 1684 aa23.55■■□□□ 1.36
TSNARE1-202ENST00000518720 NME9Q86XW9 330 aa23.55■■□□□ 1.36
TSNARE1-202ENST00000518720 ABTB2Q8N961 1025 aa23.55■■□□□ 1.36
TSNARE1-202ENST00000518720 MED1Q15648 1581 aaPredicted RBP23.55■■□□□ 1.36
TSNARE1-202ENST00000518720 CRYBG1Q9Y4K1 1723 aa23.55■■□□□ 1.36
TSNARE1-202ENST00000518720 PHRF1Q9P1Y6 1649 aaKnown RBP23.55■■□□□ 1.36
TSNARE1-202ENST00000518720 JCADQ9P266 1359 aa23.53■■□□□ 1.36
TSNARE1-202ENST00000518720 KNSTRNQ9Y448 316 aa23.53■■□□□ 1.36
TSNARE1-202ENST00000518720 CGNL1Q0VF96 1302 aa23.52■■□□□ 1.36
TSNARE1-202ENST00000518720 ZRANB1Q9UGI0 708 aa23.51■■□□□ 1.35
TSNARE1-202ENST00000518720 NLRP6P59044 892 aa23.5■■□□□ 1.35
TSNARE1-202ENST00000518720 GGNBP2Q9H3C7 697 aa23.49■■□□□ 1.35
TSNARE1-202ENST00000518720 OVOS2A0A0J9YW53 1432 aa23.49■■□□□ 1.35
TSNARE1-202ENST00000518720 OVOS2Q6IE36 1432 aa23.49■■□□□ 1.35
TSNARE1-202ENST00000518720 CNGB1Q14028 1251 aaPredicted RBP23.48■■□□□ 1.35
TSNARE1-202ENST00000518720 NLRP13Q86W25 1043 aa23.47■■□□□ 1.35
TSNARE1-202ENST00000518720 CABLES1Q8TDN4 633 aa23.47■■□□□ 1.35
TSNARE1-202ENST00000518720 SLIT3O75094 1523 aa23.47■■□□□ 1.35
TSNARE1-202ENST00000518720 FYB1O15117 783 aa23.46■■□□□ 1.35
TSNARE1-202ENST00000518720 PER1O15534 1290 aaPredicted RBP23.46■■□□□ 1.35
TSNARE1-202ENST00000518720 HAP1P54257 671 aaPredicted RBP23.46■■□□□ 1.35
TSNARE1-202ENST00000518720 USP31Q70CQ4 1352 aa23.46■■□□□ 1.35
TSNARE1-202ENST00000518720 NSD2O96028 1365 aa23.45■■□□□ 1.34
TSNARE1-202ENST00000518720 SOX12O15370 315 aa23.45■■□□□ 1.34
TSNARE1-202ENST00000518720 COG3Q96JB2 828 aa23.45■■□□□ 1.34
TSNARE1-202ENST00000518720 USP19O94966 1318 aa23.44■■□□□ 1.34
TSNARE1-202ENST00000518720 NUTM2BA6NNL0 878 aaPredicted RBP23.44■■□□□ 1.34
TSNARE1-202ENST00000518720 NUTM2EB1AL46 878 aaPredicted RBP23.44■■□□□ 1.34
TSNARE1-202ENST00000518720 AMER1Q5JTC6 1135 aaPredicted RBP23.44■■□□□ 1.34
TSNARE1-202ENST00000518720 NUTM2AQ8IVF1 878 aaPredicted RBP23.44■■□□□ 1.34
TSNARE1-202ENST00000518720 CC2D1BQ5T0F9 858 aaKnown RBP23.43■■□□□ 1.34
TSNARE1-202ENST00000518720 LTN1O94822 1766 aa23.42■■□□□ 1.34
TSNARE1-202ENST00000518720 SPATA31A6Q5VVP1 1343 aa23.41■■□□□ 1.34
TSNARE1-202ENST00000518720 NFAT5O94916 1531 aa23.41■■□□□ 1.34
TSNARE1-202ENST00000518720 LRP6O75581 1613 aa23.41■■□□□ 1.34
TSNARE1-202ENST00000518720 NPC1L1Q9UHC9 1359 aa23.38■■□□□ 1.33
TSNARE1-202ENST00000518720 ZBTB7CA1YPR0 619 aa23.37■■□□□ 1.33
TSNARE1-202ENST00000518720 TNNT2P45379 298 aaPredicted RBP23.37■■□□□ 1.33
TSNARE1-202ENST00000518720 MORC1Q86VD1 984 aa23.37■■□□□ 1.33
TSNARE1-202ENST00000518720 MAP2P11137 1827 aaKnown RBP23.37■■□□□ 1.33
TSNARE1-202ENST00000518720 ADAMTS2O95450 1211 aa23.36■■□□□ 1.33
TSNARE1-202ENST00000518720 GCP02774 474 aa23.36■■□□□ 1.33
TSNARE1-202ENST00000518720 KCNH5Q8NCM2 988 aa23.36■■□□□ 1.33
TSNARE1-202ENST00000518720 ZC3H6P61129 1189 aaKnown RBP23.35■■□□□ 1.33
TSNARE1-202ENST00000518720 MEX3CQ5U5Q3 659 aaKnown RBP23.34■■□□□ 1.33
TSNARE1-202ENST00000518720 PLCH1Q4KWH8 1693 aa23.34■■□□□ 1.33
TSNARE1-202ENST00000518720 COL14A1Q05707 1796 aaKnown RBP23.33■■□□□ 1.33
TSNARE1-202ENST00000518720 KIAA0232Q92628 1395 aa23.33■■□□□ 1.33
TSNARE1-202ENST00000518720 FBLN1P23142 703 aa23.32■■□□□ 1.32
TSNARE1-202ENST00000518720 RGPD5Q99666 1765 aa23.32■■□□□ 1.32
TSNARE1-202ENST00000518720 PRDM11Q9NQV5 511 aa23.31■■□□□ 1.32
TSNARE1-202ENST00000518720 PEAK1Q9H792 1746 aa23.3■■□□□ 1.32
TSNARE1-202ENST00000518720 CPDO75976 1380 aa23.29■■□□□ 1.32
TSNARE1-202ENST00000518720 RRS1Q15050 365 aaKnown RBP23.29■■□□□ 1.32
TSNARE1-202ENST00000518720 CHRNA2Q15822 529 aa23.29■■□□□ 1.32
TSNARE1-202ENST00000518720 COL18A1P39060 1754 aa23.28■■□□□ 1.32
TSNARE1-202ENST00000518720 C8orf37Q96NL8 207 aa23.28■■□□□ 1.32
TSNARE1-202ENST00000518720 LMO7Q8WWI1 1683 aa23.28■■□□□ 1.32
TSNARE1-202ENST00000518720 PARD3Q8TEW0 1356 aa23.27■■□□□ 1.32
TSNARE1-202ENST00000518720 MAP3K19Q56UN5 1328 aa23.27■■□□□ 1.32
TSNARE1-202ENST00000518720 AATKQ6ZMQ8 1374 aa23.27■■□□□ 1.31
TSNARE1-202ENST00000518720 NWD2Q9ULI1 1742 aa23.26■■□□□ 1.31
TSNARE1-202ENST00000518720 ARHGEF25Q86VW2 580 aa23.26■■□□□ 1.31
TSNARE1-202ENST00000518720 ABCC6O95255 1503 aa23.25■■□□□ 1.31
TSNARE1-202ENST00000518720 EMILIN1Q9Y6C2 1016 aa23.25■■□□□ 1.31
TSNARE1-202ENST00000518720 NRAPQ86VF7 1730 aa23.25■■□□□ 1.31
TSNARE1-202ENST00000518720 PPM1GO15355 546 aaPredicted RBP23.24■■□□□ 1.31
TSNARE1-202ENST00000518720 AMPHP49418 695 aa23.24■■□□□ 1.31
TSNARE1-202ENST00000518720 FAM83GA6ND36 823 aa23.23■■□□□ 1.31
TSNARE1-202ENST00000518720 NGLY1Q96IV0 654 aa23.22■■□□□ 1.31
TSNARE1-202ENST00000518720 RTL1A6NKG5 1358 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms