RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 COL22A1Q8NFW1 1626 aaPredicted RBP31.75■■■□□ 2.67
NKX6-3-201ENST00000518699 POLR3GLQ9BT43 218 aa31.75■■■□□ 2.67
NKX6-3-201ENST00000518699 KTN1Q86UP2 1357 aaKnown RBP31.75■■■□□ 2.67
NKX6-3-201ENST00000518699 HDGFL2Q7Z4V5 671 aaPredicted RBP31.74■■■□□ 2.67
NKX6-3-201ENST00000518699 EDC4Q6P2E9 1401 aaKnown RBP31.73■■■□□ 2.67
NKX6-3-201ENST00000518699 LRRC59Q96AG4 307 aaKnown RBP31.71■■■□□ 2.67
NKX6-3-201ENST00000518699 SPATA31A3Q5VYP0 1347 aa31.71■■■□□ 2.67
NKX6-3-201ENST00000518699 PIK3C2AO00443 1686 aa31.71■■■□□ 2.67
NKX6-3-201ENST00000518699 MED1Q15648 1581 aaPredicted RBP31.69■■■□□ 2.66
NKX6-3-201ENST00000518699 USP54Q70EL1 1684 aa31.68■■■□□ 2.66
NKX6-3-201ENST00000518699 PNPLA6Q8IY17 1366 aa31.68■■■□□ 2.66
NKX6-3-201ENST00000518699 JCADQ9P266 1359 aa31.68■■■□□ 2.66
NKX6-3-201ENST00000518699 ARHGEF10O15013 1369 aa31.68■■■□□ 2.66
NKX6-3-201ENST00000518699 ILDR1Q86SU0 546 aaPredicted RBP31.68■■■□□ 2.66
NKX6-3-201ENST00000518699 CRYBG1Q9Y4K1 1723 aa31.67■■■□□ 2.66
NKX6-3-201ENST00000518699 ABCA3Q99758 1704 aa31.66■■■□□ 2.66
NKX6-3-201ENST00000518699 KIF20BQ96Q89 1820 aa31.65■■■□□ 2.66
NKX6-3-201ENST00000518699 TTC21AQ8NDW8 1320 aa31.65■■■□□ 2.66
NKX6-3-201ENST00000518699 MARF1Q9Y4F3 1742 aaKnown RBP31.64■■■□□ 2.66
NKX6-3-201ENST00000518699 TTC21BQ7Z4L5 1316 aa31.63■■■□□ 2.65
NKX6-3-201ENST00000518699 NSD3Q9BZ95 1437 aa31.62■■■□□ 2.65
NKX6-3-201ENST00000518699 PAK3O75914 559 aaPredicted RBP31.61■■■□□ 2.65
NKX6-3-201ENST00000518699 PHRF1Q9P1Y6 1649 aaKnown RBP31.6■■■□□ 2.65
NKX6-3-201ENST00000518699 CARD14Q9BXL6 1004 aa31.58■■■□□ 2.65
NKX6-3-201ENST00000518699 PANK3Q9H999 370 aa31.58■■■□□ 2.65
NKX6-3-201ENST00000518699 ANKRD26Q9UPS8 1709 aa31.55■■■□□ 2.64
NKX6-3-201ENST00000518699 USP31Q70CQ4 1352 aa31.55■■■□□ 2.64
NKX6-3-201ENST00000518699 ZNF316A6NFI3 1004 aaPredicted RBP31.55■■■□□ 2.64
NKX6-3-201ENST00000518699 ABTB2Q8N961 1025 aa31.55■■■□□ 2.64
NKX6-3-201ENST00000518699 SLIT3O75094 1523 aa31.55■■■□□ 2.64
NKX6-3-201ENST00000518699 SPATA31A6Q5VVP1 1343 aa31.54■■■□□ 2.64
NKX6-3-201ENST00000518699 OVOS2A0A0J9YW53 1432 aa31.53■■■□□ 2.64
NKX6-3-201ENST00000518699 OVOS2Q6IE36 1432 aa31.53■■■□□ 2.64
NKX6-3-201ENST00000518699 LMOD2Q6P5Q4 547 aa31.53■■■□□ 2.64
NKX6-3-201ENST00000518699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.53■■■□□ 2.64
NKX6-3-201ENST00000518699 USP19O94966 1318 aa31.52■■■□□ 2.64
NKX6-3-201ENST00000518699 NME9Q86XW9 330 aa31.5■■■□□ 2.63
NKX6-3-201ENST00000518699 LRP6O75581 1613 aa31.48■■■□□ 2.63
NKX6-3-201ENST00000518699 NLRP13Q86W25 1043 aa31.48■■■□□ 2.63
NKX6-3-201ENST00000518699 CGNL1Q0VF96 1302 aa31.48■■■□□ 2.63
NKX6-3-201ENST00000518699 NLRP6P59044 892 aa31.46■■■□□ 2.63
NKX6-3-201ENST00000518699 NSD2O96028 1365 aa31.45■■■□□ 2.63
NKX6-3-201ENST00000518699 FYB1O15117 783 aa31.44■■■□□ 2.62
NKX6-3-201ENST00000518699 PER1O15534 1290 aaPredicted RBP31.44■■■□□ 2.62
NKX6-3-201ENST00000518699 NUTM2GQ5VZR2 741 aa31.44■■■□□ 2.62
NKX6-3-201ENST00000518699 NFAT5O94916 1531 aa31.43■■■□□ 2.62
NKX6-3-201ENST00000518699 KNSTRNQ9Y448 316 aa31.43■■■□□ 2.62
NKX6-3-201ENST00000518699 ZRANB1Q9UGI0 708 aa31.42■■■□□ 2.62
NKX6-3-201ENST00000518699 CABLES1Q8TDN4 633 aa31.41■■■□□ 2.62
NKX6-3-201ENST00000518699 NPC1L1Q9UHC9 1359 aa31.39■■■□□ 2.62
NKX6-3-201ENST00000518699 AMER1Q5JTC6 1135 aaPredicted RBP31.39■■■□□ 2.62
NKX6-3-201ENST00000518699 COG3Q96JB2 828 aa31.38■■■□□ 2.61
NKX6-3-201ENST00000518699 GGNBP2Q9H3C7 697 aa31.38■■■□□ 2.61
NKX6-3-201ENST00000518699 DDX10Q13206 875 aaKnown RBP31.36■■■□□ 2.61
NKX6-3-201ENST00000518699 LTN1O94822 1766 aa31.36■■■□□ 2.61
NKX6-3-201ENST00000518699 NUTM2BA6NNL0 878 aaPredicted RBP31.35■■■□□ 2.61
NKX6-3-201ENST00000518699 NUTM2EB1AL46 878 aaPredicted RBP31.35■■■□□ 2.61
NKX6-3-201ENST00000518699 HAP1P54257 671 aaPredicted RBP31.35■■■□□ 2.61
NKX6-3-201ENST00000518699 NUTM2AQ8IVF1 878 aaPredicted RBP31.35■■■□□ 2.61
NKX6-3-201ENST00000518699 KCNH5Q8NCM2 988 aa31.35■■■□□ 2.61
NKX6-3-201ENST00000518699 CPDO75976 1380 aa31.35■■■□□ 2.61
NKX6-3-201ENST00000518699 COL14A1Q05707 1796 aaKnown RBP31.35■■■□□ 2.61
NKX6-3-201ENST00000518699 GCP02774 474 aa31.34■■■□□ 2.61
NKX6-3-201ENST00000518699 PLEKHG5O94827 1062 aa31.33■■■□□ 2.61
NKX6-3-201ENST00000518699 PLCH1Q4KWH8 1693 aa31.33■■■□□ 2.61
NKX6-3-201ENST00000518699 ABCC6O95255 1503 aa31.31■■■□□ 2.6
NKX6-3-201ENST00000518699 LMO7Q8WWI1 1683 aa31.3■■■□□ 2.6
NKX6-3-201ENST00000518699 NWD2Q9ULI1 1742 aa31.3■■■□□ 2.6
NKX6-3-201ENST00000518699 KIAA0232Q92628 1395 aa31.29■■■□□ 2.6
NKX6-3-201ENST00000518699 COL18A1P39060 1754 aa31.29■■■□□ 2.6
NKX6-3-201ENST00000518699 ADAMTS2O95450 1211 aa31.28■■■□□ 2.6
NKX6-3-201ENST00000518699 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.25■■■□□ 2.59
NKX6-3-201ENST00000518699 AATKQ6ZMQ8 1374 aa31.25■■■□□ 2.59
NKX6-3-201ENST00000518699 NRAPQ86VF7 1730 aa31.25■■■□□ 2.59
NKX6-3-201ENST00000518699 MEX3CQ5U5Q3 659 aaKnown RBP31.24■■■□□ 2.59
NKX6-3-201ENST00000518699 MAP2P11137 1827 aaKnown RBP31.24■■■□□ 2.59
NKX6-3-201ENST00000518699 SLIT2O94813 1529 aa31.24■■■□□ 2.59
NKX6-3-201ENST00000518699 SOX12O15370 315 aa31.23■■■□□ 2.59
NKX6-3-201ENST00000518699 ZC3H6P61129 1189 aaKnown RBP31.23■■■□□ 2.59
NKX6-3-201ENST00000518699 ARHGEF25Q86VW2 580 aa31.23■■■□□ 2.59
NKX6-3-201ENST00000518699 PRDM11Q9NQV5 511 aa31.23■■■□□ 2.59
NKX6-3-201ENST00000518699 CC2D1BQ5T0F9 858 aaKnown RBP31.21■■■□□ 2.59
NKX6-3-201ENST00000518699 PEAK1Q9H792 1746 aa31.21■■■□□ 2.59
NKX6-3-201ENST00000518699 MORC1Q86VD1 984 aa31.2■■■□□ 2.59
NKX6-3-201ENST00000518699 SMG6Q86US8 1419 aaKnown RBP31.2■■■□□ 2.58
NKX6-3-201ENST00000518699 C8orf37Q96NL8 207 aa31.19■■■□□ 2.58
NKX6-3-201ENST00000518699 RGPD5Q99666 1765 aa31.19■■■□□ 2.58
NKX6-3-201ENST00000518699 RTL1A6NKG5 1358 aa31.19■■■□□ 2.58
NKX6-3-201ENST00000518699 FAM83GA6ND36 823 aa31.18■■■□□ 2.58
NKX6-3-201ENST00000518699 CAMTA1Q9Y6Y1 1673 aa31.17■■■□□ 2.58
NKX6-3-201ENST00000518699 KIF24Q5T7B8 1368 aa31.17■■■□□ 2.58
NKX6-3-201ENST00000518699 MAP3K19Q56UN5 1328 aa31.17■■■□□ 2.58
NKX6-3-201ENST00000518699 PARD3Q8TEW0 1356 aa31.16■■■□□ 2.58
NKX6-3-201ENST00000518699 FNBP4Q8N3X1 1017 aaPredicted RBP31.16■■■□□ 2.58
NKX6-3-201ENST00000518699 CHRNA2Q15822 529 aa31.15■■■□□ 2.58
NKX6-3-201ENST00000518699 NGLY1Q96IV0 654 aa31.15■■■□□ 2.58
NKX6-3-201ENST00000518699 FBLN1P23142 703 aa31.14■■■□□ 2.58
NKX6-3-201ENST00000518699 BCL9LQ86UU0 1499 aa31.13■■■□□ 2.57
NKX6-3-201ENST00000518699 BLMP54132 1417 aaPredicted RBP31.13■■■□□ 2.57
NKX6-3-201ENST00000518699 COL5A2P05997 1499 aaPredicted RBP31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms