RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 RNF223E7ERA6 249 aa12.76□□□□□ -0.37
SNORA48.9-201ENST00000516419 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.76□□□□□ -0.37
SNORA48.9-201ENST00000516419 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
SNORA48.9-201ENST00000516419 IRF5Q13568 498 aa12.75□□□□□ -0.37
SNORA48.9-201ENST00000516419 PTCRAQ6ISU1 281 aaPredicted RBP12.75□□□□□ -0.37
SNORA48.9-201ENST00000516419 PPP1R18Q6NYC8 613 aa12.75□□□□□ -0.37
SNORA48.9-201ENST00000516419 ANKLE1Q8NAG6 615 aa12.75□□□□□ -0.37
SNORA48.9-201ENST00000516419 UNC93B1Q9H1C4 597 aa12.74□□□□□ -0.37
SNORA48.9-201ENST00000516419 ZNF330Q9Y3S2 320 aaPredicted RBP12.74□□□□□ -0.37
SNORA48.9-201ENST00000516419 SUPT5HO00267 1087 aaKnown RBP12.73□□□□□ -0.37
SNORA48.9-201ENST00000516419 WASHC4Q2M389 1173 aa12.73□□□□□ -0.37
SNORA48.9-201ENST00000516419 GPKOWQ92917 476 aaPredicted RBP eCLIP12.73□□□□□ -0.37
SNORA48.9-201ENST00000516419 NBPF14Q5TI25 921 aa12.71□□□□□ -0.37
SNORA48.9-201ENST00000516419 PLA2G2EQ9NZK7 142 aa12.7□□□□□ -0.38
SNORA48.9-201ENST00000516419 ZBTB24O43167 697 aaPredicted RBP12.69□□□□□ -0.38
SNORA48.9-201ENST00000516419 PDXDC2PQ6P474 469 aa12.69□□□□□ -0.38
SNORA48.9-201ENST00000516419 GPSM3Q9Y4H4 160 aa12.68□□□□□ -0.38
SNORA48.9-201ENST00000516419 ZNF777Q9ULD5 760 aaPredicted RBP12.67□□□□□ -0.38
SNORA48.9-201ENST00000516419 ZBBXA8MT70 800 aa12.66□□□□□ -0.38
SNORA48.9-201ENST00000516419 PLA2G2CQ5R387 149 aa12.66□□□□□ -0.38
SNORA48.9-201ENST00000516419 PTK2Q05397 1052 aa12.65□□□□□ -0.38
SNORA48.9-201ENST00000516419 VAC14Q08AM6 782 aa12.65□□□□□ -0.38
SNORA48.9-201ENST00000516419 NR1H3Q13133 447 aa12.65□□□□□ -0.38
SNORA48.9-201ENST00000516419 BAP1Q92560 729 aa12.65□□□□□ -0.38
SNORA48.9-201ENST00000516419 RPIAP49247 311 aa12.64□□□□□ -0.39
SNORA48.9-201ENST00000516419 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
SNORA48.9-201ENST00000516419 POM121CA8CG34 1229 aa12.63□□□□□ -0.39
SNORA48.9-201ENST00000516419 FBXO45P0C2W1 286 aa12.63□□□□□ -0.39
SNORA48.9-201ENST00000516419 ZNF511Q8NB15 262 aa12.62□□□□□ -0.39
SNORA48.9-201ENST00000516419 A0A0G2JS52 829 aa12.61□□□□□ -0.39
SNORA48.9-201ENST00000516419 SOX11P35716 441 aa12.61□□□□□ -0.39
SNORA48.9-201ENST00000516419 TRIM32Q13049 653 aa12.61□□□□□ -0.39
SNORA48.9-201ENST00000516419 LINC01559Q495D7 138 aa12.61□□□□□ -0.39
SNORA48.9-201ENST00000516419 SH3BP5LQ7L8J4 393 aa12.61□□□□□ -0.39
SNORA48.9-201ENST00000516419 ARHGAP9Q9BRR9 750 aa12.61□□□□□ -0.39
SNORA48.9-201ENST00000516419 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNORA48.9-201ENST00000516419 SH3BP2P78314 561 aa12.59□□□□□ -0.39
SNORA48.9-201ENST00000516419 BPHLQ86WA6 291 aaPredicted RBP12.59□□□□□ -0.39
SNORA48.9-201ENST00000516419 C1orf115Q9H7X2 142 aa12.59□□□□□ -0.39
SNORA48.9-201ENST00000516419 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
SNORA48.9-201ENST00000516419 CD2BP2O95400 341 aaKnown RBP12.58□□□□□ -0.4
SNORA48.9-201ENST00000516419 WNT7BP56706 349 aa12.58□□□□□ -0.4
SNORA48.9-201ENST00000516419 LIAT1Q6ZQX7 453 aa12.58□□□□□ -0.4
SNORA48.9-201ENST00000516419 SH3RF1Q7Z6J0 888 aa12.58□□□□□ -0.4
SNORA48.9-201ENST00000516419 OCSTAMPQ9BR26 566 aa12.58□□□□□ -0.4
SNORA48.9-201ENST00000516419 AGERQ15109 404 aa12.57□□□□□ -0.4
SNORA48.9-201ENST00000516419 ZBTB33Q86T24 672 aa12.57□□□□□ -0.4
SNORA48.9-201ENST00000516419 FOXJ1Q92949 421 aa12.57□□□□□ -0.4
SNORA48.9-201ENST00000516419 ALG2Q9H553 416 aa12.57□□□□□ -0.4
SNORA48.9-201ENST00000516419 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
SNORA48.9-201ENST00000516419 ZNF592Q92610 1267 aa12.56□□□□□ -0.4
SNORA48.9-201ENST00000516419 GLMNQ92990 594 aa12.56□□□□□ -0.4
SNORA48.9-201ENST00000516419 CALR3Q96L12 384 aaKnown RBP12.56□□□□□ -0.4
SNORA48.9-201ENST00000516419 SLC19A1P41440 591 aa12.55□□□□□ -0.4
SNORA48.9-201ENST00000516419 SEMA3FQ13275 785 aa12.55□□□□□ -0.4
SNORA48.9-201ENST00000516419 ADAM32Q8TC27 787 aa12.55□□□□□ -0.4
SNORA48.9-201ENST00000516419 EMID1Q96A84 441 aaPredicted RBP12.55□□□□□ -0.4
SNORA48.9-201ENST00000516419 MAGEB6P1A0A0J9YX57 407 aa12.54□□□□□ -0.4
SNORA48.9-201ENST00000516419 MCCD1P59942 119 aaPredicted RBP12.54□□□□□ -0.4
SNORA48.9-201ENST00000516419 SKOR1P84550 965 aa12.53□□□□□ -0.4
SNORA48.9-201ENST00000516419 ADAMTS19Q8TE59 1207 aa12.53□□□□□ -0.4
SNORA48.9-201ENST00000516419 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
SNORA48.9-201ENST00000516419 C4orf48Q5BLP8 95 aa12.52□□□□□ -0.41
SNORA48.9-201ENST00000516419 ERFEQ4G0M1 354 aa12.51□□□□□ -0.41
SNORA48.9-201ENST00000516419 C1QTNF2Q9BXJ5 285 aa12.51□□□□□ -0.41
SNORA48.9-201ENST00000516419 SERPINA10Q9UK55 444 aa12.51□□□□□ -0.41
SNORA48.9-201ENST00000516419 PCDHB9Q9Y5E1 797 aa12.51□□□□□ -0.41
SNORA48.9-201ENST00000516419 VARSP26640 1264 aaKnown RBP12.5□□□□□ -0.41
SNORA48.9-201ENST00000516419 CCDC82Q8N4S0 544 aa12.5□□□□□ -0.41
SNORA48.9-201ENST00000516419 CCDC97Q96F63 343 aaPredicted RBP12.5□□□□□ -0.41
SNORA48.9-201ENST00000516419 SPRYD7Q5W111 196 aa12.49□□□□□ -0.41
SNORA48.9-201ENST00000516419 DZIP3Q86Y13 1208 aaKnown RBP12.49□□□□□ -0.41
SNORA48.9-201ENST00000516419 TRMT44Q8IYL2 757 aaKnown RBP12.48□□□□□ -0.41
SNORA48.9-201ENST00000516419 V9GY48 417 aaPredicted RBP12.48□□□□□ -0.41
SNORA48.9-201ENST00000516419 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
SNORA48.9-201ENST00000516419 EHBP1Q8NDI1 1231 aa12.47□□□□□ -0.41
SNORA48.9-201ENST00000516419 FAM174AQ8TBP5 190 aa12.47□□□□□ -0.41
SNORA48.9-201ENST00000516419 PRKD2Q9BZL6 878 aa12.47□□□□□ -0.41
SNORA48.9-201ENST00000516419 SLC10A4Q96EP9 437 aa12.46□□□□□ -0.41
SNORA48.9-201ENST00000516419 ZNF598Q86UK7 904 aaKnown RBP12.45□□□□□ -0.42
SNORA48.9-201ENST00000516419 CEP126Q9P2H0 1117 aa12.45□□□□□ -0.42
SNORA48.9-201ENST00000516419 CDV3Q9UKY7 258 aaKnown RBP12.45□□□□□ -0.42
SNORA48.9-201ENST00000516419 ARID3AQ99856 593 aa12.44□□□□□ -0.42
SNORA48.9-201ENST00000516419 WNT7AO00755 349 aa12.43□□□□□ -0.42
SNORA48.9-201ENST00000516419 ZNF697Q5TEC3 545 aa12.43□□□□□ -0.42
SNORA48.9-201ENST00000516419 NBPF20Q3BBV1 942 aa12.41□□□□□ -0.42
SNORA48.9-201ENST00000516419 MPNDQ8N594 471 aa12.41□□□□□ -0.42
SNORA48.9-201ENST00000516419 UCN2Q96RP3 112 aa12.41□□□□□ -0.42
SNORA48.9-201ENST00000516419 SLFNL1Q499Z3 407 aa12.4□□□□□ -0.42
SNORA48.9-201ENST00000516419 PPP1R12CQ9BZL4 782 aa12.4□□□□□ -0.42
SNORA48.9-201ENST00000516419 MAP4K5Q9Y4K4 846 aa12.4□□□□□ -0.42
SNORA48.9-201ENST00000516419 SIAH2O43255 324 aa12.39□□□□□ -0.43
SNORA48.9-201ENST00000516419 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
SNORA48.9-201ENST00000516419 MRGPRX2Q96LB1 330 aa12.39□□□□□ -0.43
SNORA48.9-201ENST00000516419 CDK15Q96Q40 435 aa12.39□□□□□ -0.43
SNORA48.9-201ENST00000516419 PHTF2Q8N3S3 785 aa12.38□□□□□ -0.43
SNORA48.9-201ENST00000516419 RGS20O76081 388 aa12.37□□□□□ -0.43
SNORA48.9-201ENST00000516419 RNF20Q5VTR2 975 aa12.37□□□□□ -0.43
SNORA48.9-201ENST00000516419 VASH1Q7L8A9 365 aaPredicted RBP12.37□□□□□ -0.43
SNORA48.9-201ENST00000516419 RNF135Q8IUD6 432 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms