RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 USP17L2Q6R6M4 530 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L1Q7RTZ2 530 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PLEKHM2Q8IWE5 1019 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 FAM177A1Q8N128 213 aaPredicted RBP4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SLC39A7Q92504 469 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 IGSF5Q9NSI5 407 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 URB2Q14146 1524 aaKnown RBP4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 RSF1Q96T23 1441 aaPredicted RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L5A8MUK1 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L15C9J2P7 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L10C9JJH3 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L13C9JLJ4 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L12C9JPN9 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L11C9JVI0 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L21D6R901 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L18D6R9N7 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L22D6RA61 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L17D6RBQ6 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L19D6RCP7 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L20D6RJB6 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 NCLP19338 710 aaKnown RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SSFA2P28290 1259 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ZC3H6P61129 1189 aaKnown RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L24Q0WX57 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 NR6A1Q15406 480 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 DOK7Q18PE1 504 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 KANK4Q5T7N3 995 aaPredicted RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 DNAJC14Q6Y2X3 702 aaPredicted RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 CCDC125Q86Z20 511 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 STK32AQ8WU08 396 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 CDCA7Q9BWT1 371 aaPredicted RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 COL17A1Q9UMD9 1497 aaPredicted RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ZC3H4Q9UPT8 1303 aaKnown RBP4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ZBBXA8MT70 800 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TRIM6-TRIM34B2RNG4 842 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 GPR37L1O60883 481 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 RASA1P20936 1047 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ATP2B4P23634 1241 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 VAMP1P23763 118 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 MCCD1P59942 119 aaPredicted RBP4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SWI5Q1ZZU3 235 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SLFNL1Q499Z3 407 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TRIM50Q86XT4 487 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 CLP1Q92989 425 aaKnown RBP4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 KIAA1522Q9P206 1035 aaPredicted RBP4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TSKSQ9UJT2 592 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ZMIZ1Q9ULJ6 1067 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PCDHGC3Q9UN70 934 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 AQRO60306 1485 aaKnown RBP eCLIP4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 GAPVD1Q14C86 1478 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 KDM6BO15054 1643 aa4.03□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ANKRD33BA6NCL7 494 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 CFAP99D6REC4 459 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PPM1GO15355 546 aaPredicted RBP4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 NUDT7P0C024 238 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 C7P10643 843 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ATP1A2P50993 1020 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 Q3C1V9 767 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ZSCAN29Q8IWY8 852 aaPredicted RBP4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 UBXN4Q92575 508 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 DCBLD2Q96PD2 775 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 BCL2L12Q9HB09 334 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ZSWIM6Q9HCJ5 1215 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 MKRN1Q9UHC7 482 aaKnown RBP4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 MYO15BQ96JP2 1530 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 COL9A1P20849 921 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 FGD1P98174 961 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 GUCA2AQ02747 115 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 EML3Q32P44 896 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 DESI1Q6ICB0 168 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 RETREG3Q86VR2 466 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 RNF135Q8IUD6 432 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ANKMY2Q8IV38 441 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 GLYCTKQ8IVS8 523 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 EPS8L1Q8TE68 723 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 FAM198AQ9UFP1 575 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 EGFL7Q9UHF1 273 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 SRCAPQ6ZRS2 3230 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ABL1P00519 1130 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 MAPK1P28482 360 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ATP6V1AP38606 617 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 SERPINB4P48594 390 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 MAP7D1Q3KQU3 841 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 KMT5BQ4FZB7 885 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 IFFO2Q5TF58 517 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PHLDB3Q6NSJ2 640 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 C1orf216Q8TAB5 229 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PPP1R1BQ9UD71 204 aaPredicted RBP4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 FKBPLQ9UIM3 349 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 COLQQ9Y215 455 aaPredicted RBP4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 CADPSQ9ULU8 1353 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 CLASP1Q7Z460 1538 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 HAX1O00165 279 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PIK3CDO00329 1044 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 FBXO45P0C2W1 286 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PTK7Q13308 1070 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 NCOA4Q13772 614 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 CRTC2Q53ET0 693 aaPredicted RBP3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 SWT1Q5T5J6 900 aaKnown RBP3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 NPAS4Q8IUM7 802 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms