RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 USP17L5A8MUK1 530 aa7.09□□□□□ -1.27
RNU6-488P-201ENST00000515918 RNF40O75150 1001 aa7.09□□□□□ -1.27
RNU6-488P-201ENST00000515918 SKIP12755 728 aa7.09□□□□□ -1.27
RNU6-488P-201ENST00000515918 KMT5BQ4FZB7 885 aa7.09□□□□□ -1.27
RNU6-488P-201ENST00000515918 BLOC1S3Q6QNY0 202 aa7.09□□□□□ -1.27
RNU6-488P-201ENST00000515918 POTEHQ6S545 545 aa7.09□□□□□ -1.27
RNU6-488P-201ENST00000515918 LAPTM4BQ86VI4 370 aa7.09□□□□□ -1.27
RNU6-488P-201ENST00000515918 DEPDC4Q8N2C3 294 aa7.09□□□□□ -1.27
RNU6-488P-201ENST00000515918 BHMG1C9JSJ3 638 aaPredicted RBP7.08□□□□□ -1.28
RNU6-488P-201ENST00000515918 SSFA2P28290 1259 aa7.08□□□□□ -1.28
RNU6-488P-201ENST00000515918 FAM69CQ0P6D2 419 aa7.08□□□□□ -1.28
RNU6-488P-201ENST00000515918 CRTC2Q53ET0 693 aaPredicted RBP7.08□□□□□ -1.28
RNU6-488P-201ENST00000515918 B4GALNT3Q6L9W6 998 aa7.08□□□□□ -1.28
RNU6-488P-201ENST00000515918 BRICD5Q6PL45 260 aa7.08□□□□□ -1.28
RNU6-488P-201ENST00000515918 MAP10Q9P2G4 905 aa7.08□□□□□ -1.28
RNU6-488P-201ENST00000515918 CCER1Q8TC90 406 aaPredicted RBP7.07□□□□□ -1.28
RNU6-488P-201ENST00000515918 ZFRQ96KR1 1074 aaKnown RBP7.07□□□□□ -1.28
RNU6-488P-201ENST00000515918 USB1Q9BQ65 265 aaKnown RBP7.07□□□□□ -1.28
RNU6-488P-201ENST00000515918 FAM196BA6NMK8 535 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L15C9J2P7 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L10C9JJH3 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L13C9JLJ4 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L12C9JPN9 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L11C9JVI0 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L21D6R901 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L18D6R9N7 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L22D6RA61 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L17D6RBQ6 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L19D6RCP7 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L20D6RJB6 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 USP17L24Q0WX57 530 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 PTK7Q13308 1070 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 NOM1Q5C9Z4 860 aaKnown RBP7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 PHTF2Q8N3S3 785 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 OCSTAMPQ9BR26 566 aa7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 MKRN1Q9UHC7 482 aaKnown RBP7.06□□□□□ -1.28
RNU6-488P-201ENST00000515918 ZC3H4Q9UPT8 1303 aaKnown RBP7.05□□□□□ -1.28
RNU6-488P-201ENST00000515918 RBM47A0AV96 593 aaKnown RBP7.05□□□□□ -1.28
RNU6-488P-201ENST00000515918 VARS2Q5ST30 1063 aaKnown RBP7.05□□□□□ -1.28
RNU6-488P-201ENST00000515918 DNAJC14Q6Y2X3 702 aaPredicted RBP7.05□□□□□ -1.28
RNU6-488P-201ENST00000515918 THAP11Q96EK4 314 aa7.05□□□□□ -1.28
RNU6-488P-201ENST00000515918 CEP126Q9P2H0 1117 aa7.05□□□□□ -1.28
RNU6-488P-201ENST00000515918 SALL2Q9Y467 1007 aaPredicted RBP7.05□□□□□ -1.28
RNU6-488P-201ENST00000515918 ARID4AP29374 1257 aaPredicted RBP7.04□□□□□ -1.28
RNU6-488P-201ENST00000515918 JUNDP17535 347 aa7.03□□□□□ -1.28
RNU6-488P-201ENST00000515918 NCOA4Q13772 614 aa7.03□□□□□ -1.28
RNU6-488P-201ENST00000515918 PTPRNQ16849 979 aa7.03□□□□□ -1.28
RNU6-488P-201ENST00000515918 SCUBE3Q8IX30 993 aa7.03□□□□□ -1.28
RNU6-488P-201ENST00000515918 CLP1Q92989 425 aaKnown RBP7.03□□□□□ -1.28
RNU6-488P-201ENST00000515918 CHIC2Q9UKJ5 165 aa7.03□□□□□ -1.28
RNU6-488P-201ENST00000515918 ERBB3P21860 1342 aa7.02□□□□□ -1.28
RNU6-488P-201ENST00000515918 RASA1P20936 1047 aa7.02□□□□□ -1.29
RNU6-488P-201ENST00000515918 TSGA10IPQ3SY00 556 aa7.02□□□□□ -1.29
RNU6-488P-201ENST00000515918 LARP1Q6PKG0 1096 aaKnown RBP7.02□□□□□ -1.29
RNU6-488P-201ENST00000515918 FAM200AQ8TCP9 573 aa7.02□□□□□ -1.29
RNU6-488P-201ENST00000515918 CDCA7Q9BWT1 371 aaPredicted RBP7.02□□□□□ -1.29
RNU6-488P-201ENST00000515918 NBPF3Q9H094 633 aa7.02□□□□□ -1.29
RNU6-488P-201ENST00000515918 IGSF5Q9NSI5 407 aa7.02□□□□□ -1.29
RNU6-488P-201ENST00000515918 SOWAHDA6NJG2 315 aa7.01□□□□□ -1.29
RNU6-488P-201ENST00000515918 SCNN1AP37088 669 aa7.01□□□□□ -1.29
RNU6-488P-201ENST00000515918 PBX2P40425 430 aa7.01□□□□□ -1.29
RNU6-488P-201ENST00000515918 KCNH2Q12809 1159 aa7.01□□□□□ -1.29
RNU6-488P-201ENST00000515918 PDXDC2PQ6P474 469 aa7.01□□□□□ -1.29
RNU6-488P-201ENST00000515918 ANKMY2Q8IV38 441 aa7.01□□□□□ -1.29
RNU6-488P-201ENST00000515918 PLPP7Q8NBV4 271 aa7.01□□□□□ -1.29
RNU6-488P-201ENST00000515918 LRCH3Q96II8 777 aa7.01□□□□□ -1.29
RNU6-488P-201ENST00000515918 GPSM3Q9Y4H4 160 aa7.01□□□□□ -1.29
RNU6-488P-201ENST00000515918 ATP5J2-PTCD1G3V325 749 aa7□□□□□ -1.29
RNU6-488P-201ENST00000515918 FMNL1O95466 1100 aaPredicted RBP7□□□□□ -1.29
RNU6-488P-201ENST00000515918 CTHP32929 405 aa7□□□□□ -1.29
RNU6-488P-201ENST00000515918 SERPINB4P48594 390 aa7□□□□□ -1.29
RNU6-488P-201ENST00000515918 APLP1P51693 650 aa7□□□□□ -1.29
RNU6-488P-201ENST00000515918 CLDN10P78369 228 aa7□□□□□ -1.29
RNU6-488P-201ENST00000515918 SLFNL1Q499Z3 407 aa7□□□□□ -1.29
RNU6-488P-201ENST00000515918 RNF135Q8IUD6 432 aa7□□□□□ -1.29
RNU6-488P-201ENST00000515918 CDKN2AIPQ9NXV6 580 aaPredicted RBP7□□□□□ -1.29
RNU6-488P-201ENST00000515918 KIAA1522Q9P206 1035 aaPredicted RBP7□□□□□ -1.29
RNU6-488P-201ENST00000515918 LZTS3O60299 673 aaPredicted RBP6.99□□□□□ -1.29
RNU6-488P-201ENST00000515918 DKK1O94907 266 aa6.99□□□□□ -1.29
RNU6-488P-201ENST00000515918 ATP2B4P23634 1241 aa6.99□□□□□ -1.29
RNU6-488P-201ENST00000515918 PTK2Q05397 1052 aa6.99□□□□□ -1.29
RNU6-488P-201ENST00000515918 DPYDQ12882 1025 aa6.99□□□□□ -1.29
RNU6-488P-201ENST00000515918 TRAF7Q6Q0C0 670 aa6.99□□□□□ -1.29
RNU6-488P-201ENST00000515918 OGFOD1Q8N543 542 aa6.99□□□□□ -1.29
RNU6-488P-201ENST00000515918 PRR14Q9BWN1 585 aa6.99□□□□□ -1.29
RNU6-488P-201ENST00000515918 EVA1BQ9NVM1 165 aa6.99□□□□□ -1.29
RNU6-488P-201ENST00000515918 PCDHB9Q9Y5E1 797 aa6.99□□□□□ -1.29
RNU6-488P-201ENST00000515918 TK2O00142 265 aa6.98□□□□□ -1.29
RNU6-488P-201ENST00000515918 MCCD1P59942 119 aaPredicted RBP6.98□□□□□ -1.29
RNU6-488P-201ENST00000515918 ZNF687Q8N1G0 1237 aa6.98□□□□□ -1.29
RNU6-488P-201ENST00000515918 MRPL50Q8N5N7 158 aaKnown RBP6.98□□□□□ -1.29
RNU6-488P-201ENST00000515918 FAM160A2Q8N612 972 aaPredicted RBP6.98□□□□□ -1.29
RNU6-488P-201ENST00000515918 ZBTB7BO15156 539 aaPredicted RBP6.97□□□□□ -1.29
RNU6-488P-201ENST00000515918 DXOO77932 396 aaKnown RBP6.97□□□□□ -1.29
RNU6-488P-201ENST00000515918 CCNYL3P0C7X3 344 aa6.97□□□□□ -1.29
RNU6-488P-201ENST00000515918 NR1I2O75469 434 aa6.96□□□□□ -1.3
RNU6-488P-201ENST00000515918 ERCC3P19447 782 aa6.96□□□□□ -1.3
RNU6-488P-201ENST00000515918 SWI5Q1ZZU3 235 aa6.96□□□□□ -1.3
RNU6-488P-201ENST00000515918 MAP7D1Q3KQU3 841 aa6.96□□□□□ -1.3
RNU6-488P-201ENST00000515918 MSS51Q4VC12 460 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms