RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 MORC1Q86VD1 984 aa16.01■□□□□ 0.15
LMNA-224ENST00000515711 NALCNQ8IZF0 1738 aa16.01■□□□□ 0.15
LMNA-224ENST00000515711 SHPRHQ149N8 1683 aa16.01■□□□□ 0.15
LMNA-224ENST00000515711 CPSF1Q10570 1443 aaKnown RBP16.01■□□□□ 0.15
LMNA-224ENST00000515711 PHLPP1O60346 1717 aa16■□□□□ 0.15
LMNA-224ENST00000515711 RXRBP28702 533 aa16■□□□□ 0.15
LMNA-224ENST00000515711 GTF3C3Q9Y5Q9 886 aa16■□□□□ 0.15
LMNA-224ENST00000515711 ANKARQ7Z5J8 1434 aa16■□□□□ 0.15
LMNA-224ENST00000515711 WDR43Q15061 677 aaKnown RBP eCLIP15.98■□□□□ 0.15
LMNA-224ENST00000515711 CABP1Q9NZU7 370 aa15.98■□□□□ 0.15
LMNA-224ENST00000515711 CCDC61Q9Y6R9 512 aa15.98■□□□□ 0.15
LMNA-224ENST00000515711 NUDT16Q96DE0 195 aaKnown RBP15.97■□□□□ 0.15
LMNA-224ENST00000515711 RGPD8O14715 1765 aaPredicted RBP15.97■□□□□ 0.15
LMNA-224ENST00000515711 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
LMNA-224ENST00000515711 NKTRP30414 1462 aaKnown RBP15.95■□□□□ 0.14
LMNA-224ENST00000515711 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
LMNA-224ENST00000515711 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
LMNA-224ENST00000515711 CDK12Q9NYV4 1490 aaPredicted RBP15.93■□□□□ 0.14
LMNA-224ENST00000515711 PROSER2Q86WR7 435 aaPredicted RBP15.93■□□□□ 0.14
LMNA-224ENST00000515711 SMG6Q86US8 1419 aaKnown RBP15.93■□□□□ 0.14
LMNA-224ENST00000515711 SPATA31A6Q5VVP1 1343 aa15.93■□□□□ 0.14
LMNA-224ENST00000515711 PRR36Q9H6K5 1346 aa15.93■□□□□ 0.14
LMNA-224ENST00000515711 MAP2P11137 1827 aaKnown RBP15.92■□□□□ 0.14
LMNA-224ENST00000515711 KCNA6P17658 529 aa15.92■□□□□ 0.14
LMNA-224ENST00000515711 RGS12O14924 1447 aa15.92■□□□□ 0.14
LMNA-224ENST00000515711 ADGRL3Q9HAR2 1447 aa15.92■□□□□ 0.14
LMNA-224ENST00000515711 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
LMNA-224ENST00000515711 PLEKHG3A1L390 1219 aa15.91■□□□□ 0.14
LMNA-224ENST00000515711 FYB1O15117 783 aa15.91■□□□□ 0.14
LMNA-224ENST00000515711 SLAIN2Q9P270 581 aa15.91■□□□□ 0.14
LMNA-224ENST00000515711 USP6P35125 1406 aa15.9■□□□□ 0.14
LMNA-224ENST00000515711 NUTM2BA6NNL0 878 aaPredicted RBP15.89■□□□□ 0.13
LMNA-224ENST00000515711 NUTM2EB1AL46 878 aaPredicted RBP15.89■□□□□ 0.13
LMNA-224ENST00000515711 PDE3BQ13370 1112 aa15.89■□□□□ 0.13
LMNA-224ENST00000515711 NUTM2AQ8IVF1 878 aaPredicted RBP15.89■□□□□ 0.13
LMNA-224ENST00000515711 NGEFQ8N5V2 710 aa15.89■□□□□ 0.13
LMNA-224ENST00000515711 ZRANB1Q9UGI0 708 aa15.89■□□□□ 0.13
LMNA-224ENST00000515711 COL3A1P02461 1466 aaPredicted RBP15.89■□□□□ 0.13
LMNA-224ENST00000515711 ADAMTS8Q9UP79 889 aa15.88■□□□□ 0.13
LMNA-224ENST00000515711 MSH6P52701 1360 aa15.87■□□□□ 0.13
LMNA-224ENST00000515711 NEFLP07196 543 aa15.87■□□□□ 0.13
LMNA-224ENST00000515711 GGNBP2Q9H3C7 697 aa15.87■□□□□ 0.13
LMNA-224ENST00000515711 AFF2P51816 1311 aa15.87■□□□□ 0.13
LMNA-224ENST00000515711 AATKQ6ZMQ8 1374 aa15.87■□□□□ 0.13
LMNA-224ENST00000515711 KIF1AQ12756 1690 aa15.86■□□□□ 0.13
LMNA-224ENST00000515711 MTHFSP49914 203 aa15.86■□□□□ 0.13
LMNA-224ENST00000515711 TTC21AQ8NDW8 1320 aa15.86■□□□□ 0.13
LMNA-224ENST00000515711 TNNT2P45379 298 aaPredicted RBP15.85■□□□□ 0.13
LMNA-224ENST00000515711 NUDCQ9Y266 331 aa15.85■□□□□ 0.13
LMNA-224ENST00000515711 ACEP12821 1306 aa15.85■□□□□ 0.13
LMNA-224ENST00000515711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.84■□□□□ 0.13
LMNA-224ENST00000515711 OVOS2A0A0J9YW53 1432 aa15.84■□□□□ 0.13
LMNA-224ENST00000515711 OVOS2Q6IE36 1432 aa15.84■□□□□ 0.13
LMNA-224ENST00000515711 SSH2Q76I76 1423 aa15.84■□□□□ 0.13
LMNA-224ENST00000515711 NCOA3Q9Y6Q9 1424 aa15.84■□□□□ 0.13
LMNA-224ENST00000515711 PIK3C2AO00443 1686 aa15.83■□□□□ 0.13
LMNA-224ENST00000515711 COG3Q96JB2 828 aa15.83■□□□□ 0.12
LMNA-224ENST00000515711 PNPLA6Q8IY17 1366 aa15.83■□□□□ 0.12
LMNA-224ENST00000515711 TTC21BQ7Z4L5 1316 aa15.82■□□□□ 0.12
LMNA-224ENST00000515711 DCCP43146 1447 aa15.81■□□□□ 0.12
LMNA-224ENST00000515711 MARF1Q9Y4F3 1742 aaKnown RBP15.8■□□□□ 0.12
LMNA-224ENST00000515711 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
LMNA-224ENST00000515711 USP31Q70CQ4 1352 aa15.79■□□□□ 0.12
LMNA-224ENST00000515711 RBM6P78332 1123 aaKnown RBP15.79■□□□□ 0.12
LMNA-224ENST00000515711 NME9Q86XW9 330 aa15.79■□□□□ 0.12
LMNA-224ENST00000515711 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
LMNA-224ENST00000515711 QTRT2Q9H974 415 aaKnown RBP15.79■□□□□ 0.12
LMNA-224ENST00000515711 RUNDC1Q96C34 613 aa15.78■□□□□ 0.12
LMNA-224ENST00000515711 AHDC1Q5TGY3 1603 aaPredicted RBP15.78■□□□□ 0.12
LMNA-224ENST00000515711 NUTM2FA1L443 756 aa15.77■□□□□ 0.12
LMNA-224ENST00000515711 PNNQ9H307 717 aaKnown RBP15.77■□□□□ 0.12
LMNA-224ENST00000515711 ZNF521Q96K83 1311 aa15.76■□□□□ 0.11
LMNA-224ENST00000515711 DIAPH1O60610 1272 aaKnown RBP15.76■□□□□ 0.11
LMNA-224ENST00000515711 C8orf37Q96NL8 207 aa15.76■□□□□ 0.11
LMNA-224ENST00000515711 C14orf37Q86TY3 774 aa15.75■□□□□ 0.11
LMNA-224ENST00000515711 POLKQ9UBT6 870 aa15.75■□□□□ 0.11
LMNA-224ENST00000515711 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
LMNA-224ENST00000515711 ERICH6BQ5W0A0 696 aa15.74■□□□□ 0.11
LMNA-224ENST00000515711 CCDC146Q8IYE0 955 aa15.74■□□□□ 0.11
LMNA-224ENST00000515711 PMFBP1Q8TBY8 1022 aa15.74■□□□□ 0.11
LMNA-224ENST00000515711 PHF8Q9UPP1 1060 aa15.74■□□□□ 0.11
LMNA-224ENST00000515711 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
LMNA-224ENST00000515711 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
LMNA-224ENST00000515711 PEAK1Q9H792 1746 aa15.73■□□□□ 0.11
LMNA-224ENST00000515711 TRPM3Q9HCF6 1732 aaPredicted RBP15.73■□□□□ 0.11
LMNA-224ENST00000515711 KIF24Q5T7B8 1368 aa15.73■□□□□ 0.11
LMNA-224ENST00000515711 RGPD1P0DJD0 1748 aa15.72■□□□□ 0.11
LMNA-224ENST00000515711 APAF1O14727 1248 aa15.72■□□□□ 0.11
LMNA-224ENST00000515711 GOLGA2Q08379 1002 aa15.72■□□□□ 0.11
LMNA-224ENST00000515711 FKBP8Q14318 412 aa15.72■□□□□ 0.11
LMNA-224ENST00000515711 LTN1O94822 1766 aa15.72■□□□□ 0.11
LMNA-224ENST00000515711 PHRF1Q9P1Y6 1649 aaKnown RBP15.72■□□□□ 0.11
LMNA-224ENST00000515711 CCDC27Q2M243 656 aa15.71■□□□□ 0.11
LMNA-224ENST00000515711 C19orf44Q9H6X5 657 aa15.71■□□□□ 0.11
LMNA-224ENST00000515711 SALL2Q9Y467 1007 aaPredicted RBP15.71■□□□□ 0.11
LMNA-224ENST00000515711 C1orf167Q5SNV9 1468 aa15.71■□□□□ 0.1
LMNA-224ENST00000515711 RNF123Q5XPI4 1314 aa15.7■□□□□ 0.1
LMNA-224ENST00000515711 MAPK8IP3Q9UPT6 1336 aa15.7■□□□□ 0.1
LMNA-224ENST00000515711 U2SURPO15042 1029 aaKnown RBP15.69■□□□□ 0.1
LMNA-224ENST00000515711 NEFMP07197 916 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms