RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 UPF1Q92900 1129 aaKnown RBP eCLIP32.89■■■□□ 2.86
CLDND1-230ENST00000514537 TOPAZ1Q8N9V7 1692 aa32.88■■■□□ 2.85
CLDND1-230ENST00000514537 FAM83GA6ND36 823 aa32.88■■■□□ 2.85
CLDND1-230ENST00000514537 QRICH2Q9H0J4 1663 aa32.88■■■□□ 2.85
CLDND1-230ENST00000514537 EVC2Q86UK5 1308 aa32.87■■■□□ 2.85
CLDND1-230ENST00000514537 PPIP5K1Q6PFW1 1433 aa32.86■■■□□ 2.85
CLDND1-230ENST00000514537 CARD11Q9BXL7 1154 aa32.84■■■□□ 2.85
CLDND1-230ENST00000514537 ABCA3Q99758 1704 aa32.84■■■□□ 2.85
CLDND1-230ENST00000514537 CABP1Q9NZU7 370 aa32.83■■■□□ 2.85
CLDND1-230ENST00000514537 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.81■■■□□ 2.84
CLDND1-230ENST00000514537 VPS72Q15906 364 aa32.8■■■□□ 2.84
CLDND1-230ENST00000514537 RALGAPBQ86X10 1494 aa32.79■■■□□ 2.84
CLDND1-230ENST00000514537 NUTM2GQ5VZR2 741 aa32.77■■■□□ 2.84
CLDND1-230ENST00000514537 ABTB2Q8N961 1025 aa32.76■■■□□ 2.83
CLDND1-230ENST00000514537 BRD4O60885 1362 aaPredicted RBP32.75■■■□□ 2.83
CLDND1-230ENST00000514537 BTG4Q9NY30 223 aa32.75■■■□□ 2.83
CLDND1-230ENST00000514537 SBNO2Q9Y2G9 1366 aa32.74■■■□□ 2.83
CLDND1-230ENST00000514537 GLI3P10071 1580 aa32.73■■■□□ 2.83
CLDND1-230ENST00000514537 NWD2Q9ULI1 1742 aa32.73■■■□□ 2.83
CLDND1-230ENST00000514537 PLCH1Q4KWH8 1693 aa32.72■■■□□ 2.83
CLDND1-230ENST00000514537 CRYBG1Q9Y4K1 1723 aa32.72■■■□□ 2.83
CLDND1-230ENST00000514537 PRDM11Q9NQV5 511 aa32.72■■■□□ 2.83
CLDND1-230ENST00000514537 ATAD2Q6PL18 1390 aa32.7■■■□□ 2.83
CLDND1-230ENST00000514537 CCDC9Q9Y3X0 531 aaKnown RBP32.7■■■□□ 2.83
CLDND1-230ENST00000514537 USP6P35125 1406 aa32.69■■■□□ 2.82
CLDND1-230ENST00000514537 KIAA0232Q92628 1395 aa32.69■■■□□ 2.82
CLDND1-230ENST00000514537 ONECUT3O60422 494 aaPredicted RBP32.68■■■□□ 2.82
CLDND1-230ENST00000514537 NLRP13Q86W25 1043 aa32.68■■■□□ 2.82
CLDND1-230ENST00000514537 USP19O94966 1318 aa32.68■■■□□ 2.82
CLDND1-230ENST00000514537 COL14A1Q05707 1796 aaKnown RBP32.68■■■□□ 2.82
CLDND1-230ENST00000514537 ZC3H6P61129 1189 aaKnown RBP32.67■■■□□ 2.82
CLDND1-230ENST00000514537 ZNF692Q9BU19 519 aaPredicted RBP32.66■■■□□ 2.82
CLDND1-230ENST00000514537 SSH2Q76I76 1423 aa32.66■■■□□ 2.82
CLDND1-230ENST00000514537 CHRNA2Q15822 529 aa32.64■■■□□ 2.82
CLDND1-230ENST00000514537 SEPT12Q8IYM1 358 aa32.64■■■□□ 2.82
CLDND1-230ENST00000514537 PCGF6Q9BYE7 350 aa32.64■■■□□ 2.82
CLDND1-230ENST00000514537 NRAPQ86VF7 1730 aa32.62■■■□□ 2.81
CLDND1-230ENST00000514537 PHRF1Q9P1Y6 1649 aaKnown RBP32.62■■■□□ 2.81
CLDND1-230ENST00000514537 GCP02774 474 aa32.61■■■□□ 2.81
CLDND1-230ENST00000514537 CLSPNQ9HAW4 1339 aa32.6■■■□□ 2.81
CLDND1-230ENST00000514537 NLRP6P59044 892 aa32.6■■■□□ 2.81
CLDND1-230ENST00000514537 CPDO75976 1380 aa32.59■■■□□ 2.81
CLDND1-230ENST00000514537 SPATA31A5Q5VU36 1347 aa32.59■■■□□ 2.81
CLDND1-230ENST00000514537 SPATA31A7Q8IWB4 1347 aa32.59■■■□□ 2.81
CLDND1-230ENST00000514537 CPSF1Q10570 1443 aaKnown RBP32.59■■■□□ 2.81
CLDND1-230ENST00000514537 TIMELESSQ9UNS1 1208 aa32.58■■■□□ 2.81
CLDND1-230ENST00000514537 EP400Q96L91 3159 aa32.58■■■□□ 2.81
CLDND1-230ENST00000514537 TTC21BQ7Z4L5 1316 aa32.57■■■□□ 2.8
CLDND1-230ENST00000514537 NRKQ7Z2Y5 1582 aa32.57■■■□□ 2.8
CLDND1-230ENST00000514537 ST20-MTHFSA0A0A6YYL1 179 aa32.56■■■□□ 2.8
CLDND1-230ENST00000514537 PUS7Q96PZ0 661 aaKnown RBP32.56■■■□□ 2.8
CLDND1-230ENST00000514537 FAM98CQ17RN3 349 aaKnown RBP32.55■■■□□ 2.8
CLDND1-230ENST00000514537 TESK2Q96S53 571 aa32.55■■■□□ 2.8
CLDND1-230ENST00000514537 STRN4Q9NRL3 753 aa32.53■■■□□ 2.8
CLDND1-230ENST00000514537 TTC21AQ8NDW8 1320 aa32.52■■■□□ 2.8
CLDND1-230ENST00000514537 CCDC125Q86Z20 511 aa32.52■■■□□ 2.8
CLDND1-230ENST00000514537 KTN1Q86UP2 1357 aaKnown RBP32.52■■■□□ 2.8
CLDND1-230ENST00000514537 KRT27Q7Z3Y8 459 aa32.51■■■□□ 2.79
CLDND1-230ENST00000514537 SPATA31A1Q5TZJ5 1347 aa32.51■■■□□ 2.79
CLDND1-230ENST00000514537 SLC24A1O60721 1099 aa32.5■■■□□ 2.79
CLDND1-230ENST00000514537 EVA1CP58658 441 aa32.5■■■□□ 2.79
CLDND1-230ENST00000514537 TMC1Q8TDI8 760 aa32.5■■■□□ 2.79
CLDND1-230ENST00000514537 SLC12A5Q9H2X9 1139 aa32.5■■■□□ 2.79
CLDND1-230ENST00000514537 A0A0G2JS52 829 aa32.49■■■□□ 2.79
CLDND1-230ENST00000514537 MYT1Q01538 1121 aa32.49■■■□□ 2.79
CLDND1-230ENST00000514537 SLIT3O75094 1523 aa32.48■■■□□ 2.79
CLDND1-230ENST00000514537 CAMTA1Q9Y6Y1 1673 aa32.48■■■□□ 2.79
CLDND1-230ENST00000514537 AKAP12Q02952 1782 aa32.47■■■□□ 2.79
CLDND1-230ENST00000514537 CD163L1Q9NR16 1453 aa32.47■■■□□ 2.79
CLDND1-230ENST00000514537 PIK3C2AO00443 1686 aa32.46■■■□□ 2.79
CLDND1-230ENST00000514537 BRWD3Q6RI45 1802 aa32.45■■■□□ 2.79
CLDND1-230ENST00000514537 HDGFL2Q7Z4V5 671 aaPredicted RBP32.44■■■□□ 2.78
CLDND1-230ENST00000514537 AATKQ6ZMQ8 1374 aa32.44■■■□□ 2.78
CLDND1-230ENST00000514537 LMO7Q8WWI1 1683 aa32.43■■■□□ 2.78
CLDND1-230ENST00000514537 LARP1Q6PKG0 1096 aaKnown RBP32.43■■■□□ 2.78
CLDND1-230ENST00000514537 KCNH5Q8NCM2 988 aa32.43■■■□□ 2.78
CLDND1-230ENST00000514537 USP47Q96K76 1375 aa32.43■■■□□ 2.78
CLDND1-230ENST00000514537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.41■■■□□ 2.78
CLDND1-230ENST00000514537 TERF2IPQ9NYB0 399 aa32.41■■■□□ 2.78
CLDND1-230ENST00000514537 ZBTB7CA1YPR0 619 aa32.4■■■□□ 2.78
CLDND1-230ENST00000514537 ARHGEF25Q86VW2 580 aa32.4■■■□□ 2.78
CLDND1-230ENST00000514537 BLMP54132 1417 aaPredicted RBP32.4■■■□□ 2.78
CLDND1-230ENST00000514537 BARGINQ6ZT62 677 aa32.39■■■□□ 2.78
CLDND1-230ENST00000514537 USP35Q9P2H5 1018 aa32.39■■■□□ 2.78
CLDND1-230ENST00000514537 USP31Q70CQ4 1352 aa32.38■■■□□ 2.77
CLDND1-230ENST00000514537 MON2Q7Z3U7 1717 aa32.37■■■□□ 2.77
CLDND1-230ENST00000514537 COL5A2P05997 1499 aaPredicted RBP32.37■■■□□ 2.77
CLDND1-230ENST00000514537 NINLQ9Y2I6 1382 aa32.37■■■□□ 2.77
CLDND1-230ENST00000514537 ZRANB1Q9UGI0 708 aa32.37■■■□□ 2.77
CLDND1-230ENST00000514537 A0A1W2PP64 1363 aa32.36■■■□□ 2.77
CLDND1-230ENST00000514537 NME9Q86XW9 330 aa32.36■■■□□ 2.77
CLDND1-230ENST00000514537 TCP11L2Q8N4U5 519 aa32.36■■■□□ 2.77
CLDND1-230ENST00000514537 THSD7AQ9UPZ6 1657 aa32.36■■■□□ 2.77
CLDND1-230ENST00000514537 SOX12O15370 315 aa32.35■■■□□ 2.77
CLDND1-230ENST00000514537 TMF1P82094 1093 aa32.35■■■□□ 2.77
CLDND1-230ENST00000514537 CCER1Q8TC90 406 aaPredicted RBP32.35■■■□□ 2.77
CLDND1-230ENST00000514537 AXIN2Q9Y2T1 843 aa32.35■■■□□ 2.77
CLDND1-230ENST00000514537 EDC4Q6P2E9 1401 aaKnown RBP32.34■■■□□ 2.77
CLDND1-230ENST00000514537 THRAP3Q9Y2W1 955 aaKnown RBP32.34■■■□□ 2.77
CLDND1-230ENST00000514537 SF3B2Q13435 895 aaKnown RBP32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms